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Thomas H. Speak

Publications and source records attributed to Thomas H. Speak.

9 recordsLinked to original sources

Automated Assignment and Prediction of Molecules in Astronomical Line Surveys Using Machine-Learning-Based Chemical Embeddings

Modern radio telescopes generate vast amounts of observational data, offering valuable insights into the molecular composition of interstellar sources. Identifying the molecules within these datasets typically involves time-consuming and labor-intensive manual analysis. This paper presents an automated method for assigning molecules in interstellar line surveys. The algorithm operates in two main stages. First, it automatically determines key parameters of the data, including excitation temperature, line width, and source velocity. Next, it assigns the observed spectral peaks by evaluating the spectroscopic match of the molecular candidates along with analyzing their chemical relevance to the interstellar source. The chemical relevance is determined by leveraging machine-learning-based molecular embedding techniques to analyze the regions of chemical space occupied by the observed species. Following the line assignment, this information is then used to generate new molecular candidates that occupy the same regions of chemical space. These newly generated species serve as promising targets for further investigation in the observational data. The algorithm was validated on spectral line surveys of the dark molecular cloud TMC-1 and the star-forming region IRAS 16293-2422B. In both cases, it identified at least 67 molecular species, accounting for over 90 percent of the analyzed line intensity, in 17 minutes or less while maintaining a high level of accuracy.

astro-ph.GA↗

Infrared Spectroscopy and Photochemistry of Aromatic Nitriles in Para-Hydrogen Matrices

Motivated by recent detections of several aromatic nitriles in Taurus Molecular Cloud-1, we report laboratory and theoretical investigations of the vibrational spectroscopy and photochemistry of singly and doubly cyano-substituted benzene in solid para-hydrogen matrices. We compare the photochemistry of cyanobenzene (benzonitrile) and three dicyanobenzene isomers initiated by excitations at 193 nm. In addition, we report the photochemistry of deuterated cyanobenzene (d$_5$-cyanobenzene), enabling us to determine the major products produced during the cyanobenzene photodissociation. The major products observed in the photolysis of all the nitriles are HCN and HNC, which are likely produced by hydrogen abstraction from para-H$_2$ by the CN radical. This indicates that the major photodissociation channel involves cleavage of the bond between the ring and the nitrile group, forming the phenyl (or cyanophenyl) radical + CN. We observe secondary photoproducts similar to those found during benzene photolysis. Our findings may aid the interpretation of recent JWST mid-infrared observations of aromatics in photodissociation regions.

astro-ph.SR↗

Detection of the Polycyclic Aromatic Hydrocarbon Phenalene (C$_{13}$H$_{10}$) in the Very Low Luminosity Object (VeLLO) MC27/L1521F

To date, 14 polycyclic aromatic hydrocarbons (PAHs) ranging in size from two to seven (including five- and six-membered) carbon rings have been detected in the starless dense core TMC-1 CP within the Taurus molecular cloud. Their detection raises questions about the distribution of PAHs in the cold interstellar medium (ISM) and their evolution during star formation. Here, we present the first interstellar detection of a three-ring PAH outside of TMC-1 CP. We detect phenalene (C$_{13}$H$_{10}$), a compact, peri-fused PAH, in the dense core MC27/L1521F, a molecular cloud in Taurus containing a very low-luminosity object (VeLLO). We compare the abundances of phenalene in the two sources with respect to the single-ring aromatic benzonitrile, and find that it is enhanced by a factor of four in MC27/L1521F. We discuss the implications for possible formation and destruction pathways in the two sources. These findings further support the widespread abundance of PAHs throughout the cold ISM and are consistent with survival, inheritance, or replenishment during the earliest stages of star formation.

astro-ph.GA↗

The impact of hydrogen atom tunneling on aromatic chemistry in TMC-1

Hydrogen atom tunneling likely plays a substantial role in the gas-phase chemistry of astrochemical environments. To determine the potential effect that it has on the chemical modeling of aromatic molecules, we screened the kida.uva.2024 network, and our own expanded network to find reactions which could be significantly accelerated by hydrogen atom tunneling in the ISM. In total, 64 reactions were identified. The hydrogen abstraction reactions from H$_{2}$ to four key interstellar radicals (C$_{2}$H, OH, CN, and NH$_{2}$) were studied further using newly calculated potential energy surfaces and RRKM analyses to determine rate coefficients for a temperature of 10 K and a density of 2 $\times$ 10$^{4}$ cm$^{-3}$. Despite having low rate coefficients of 1.66 $\times$ 10$^{-15}$, 8.17 $\times$ 10$^{-16}$ and 3.15 $\times$ 10$^{-16}$ $\mathrm{cm^{3}\,s^{-1}}$ the C$_{2}$H, OH, and CN reactions are competitive in the ISM, due to large overall rates caused by the high abundance of molecular hydrogen. The calculated value for the NH$_{2}$ reaction, however, was much smaller and found to be inefficient at ISM conditions. The possible effects of all other considered reactions were studied with simulations using calculated collision limit rate coefficients. Upper and lower bounds were then placed on modeled aromatic abundances using the most significant reactions. Due to the dependence of calculated aromatic abundances on reactions involving c-C$_{6}$H$_{5}^{+}$ and the recent questions surrounding its reactivity, we also explored the abundance variations caused by reactions leading to or involving c-C$_{6}$H$_{5}^{+}$.

astro-ph.GA↗

Rotational Spectra and Search for Aromatic Imines: 9-Iminofluorene and Benzophenone imine

Interstellar detections of several cyano derivatives of large polycyclic aromatic hydrocarbons (PAHs) have now been achieved, enabled by accurate laboratory measurements of their microwave rotational spectra. These results highlight the continued promise of other N-containing unsaturated PAHs, such as aromatic imines, as candidates for future laboratory studies and astronomical searches. In this work, we present broadband spectroscopic measurements of 9-iminofluorene and benzophenone imine in the 6-18\,GHz band. These measurements yield accurate rotational, centrifugal distortion, and $^{14}$N quadrupole coupling constants for both molecules. Using these experimentally-derived constants, we attempted a search for both molecules in the cold molecular cloud TMC-1 using observations from the Green Bank Telescope (GBT). Neither of these two ketimines was detected above the current noise level, establishing upper limits for their column densities of $5.1\times10^{12}\,\text{cm}^{-2}$ for 9-iminofluorene and $1.3\times10^{13}\,\text{cm}^{-2}$ for benzophenone imine. We also attempted a search for phenylmethanimine (both E/Z isomers) as the simplest aromatic aldimine, but neither was detected in TMC-1. To provide insight into these non-detections, we propose and evaluate different formation pathways using respective potential energy surfaces as determined by high-precision quantum chemical calculations. The result suggests the presence of an entrance barrier to forming the intermediate species, potentially explaining the low abundance.

astro-ph.GA↗

Discovery of the 7-ring PAH Cyanocoronene (C$_{24}$H$_{11}$CN) in GOTHAM Observations of TMC-1

We present the synthesis and laboratory rotational spectroscopy of the 7-ring polycyclic aromatic hydrocarbon (PAH) cyanocoronene (C$_{24}$H$_{11}$CN) using a laser-ablation assisted cavity-enhanced Fourier transform microwave spectrometer. A total of 71 transitions were measured and assigned between 6.8--10.6\,GHz. Using these assignments, we searched for emission from cyanocoronene in the GBT Observations of TMC-1: Hunting Aromatic Molecules (GOTHAM) project observations of the cold dark molecular cloud TMC-1 using the 100\,m Green Bank Telescope (GBT). We detect a number of individually resolved transitions in ultrasensitive X-band observations and perform a Markov Chain Monte Carlo analysis to derive best-fit parameters, including a total column density of $N(\mathrm{C}_{24}\mathrm{H}_{11}\mathrm{CN}) = 2.69^{+0.26}_{-0.23} \times 10^{12}\,\mathrm{cm}^{-2}$ at a temperature of $6.05^{+0.38}_{-0.37}\,$K. A spectral stacking and matched filtering analysis provides a robust 17.3$\,σ$ significance to the overall detection. The derived column density is comparable to that of cyano-substituted naphthalene, acenaphthylene, and pyrene, defying the trend of decreasing abundance with increasing molecular size and complexity found for carbon chains. We discuss the implications of the detection for our understanding of interstellar PAH chemistry and highlight major open questions and next steps.

astro-ph.GA↗

The Missing Link of Sulfur Chemistry in TMC-1: The Detection of c-C3H2S from the GOTHAM Survey

We present the spectroscopic characterization of cyclopropenethione (c-C3H2S) in the laboratory and detect it in space using the Green Bank Telescope (GBT) Observations of TMC-1: Hunting Aromatic Molecules (GOTHAM) survey. The detection of this molecule - the missing link in understanding the C3H2S isomeric family in TMC-1 - completes the detection of all 3 low-energy isomers of C3H2S as both CH2CCS and HCCCHS have been previously detected in this source. The total column density of this molecule (N_T of 5.72+2.65/-1.61x10^10 cm^-2 at an excitation temperature of 4.7+1.3/-1.1 K) is smaller than both CH2CCS and HCCCHS and follows nicely the relative dipole principle (RDP), a kinetic rule-of-thumb for predicting isomer abundances which suggests that, all other chemistry among a family of isomers being the same, the member with the smallest dipole should be the most abundant. The RDP now holds for the astronomical abundance ratios of both the S-bearing and O-bearing counterparts observed in TMC-1; however, CH2CCO continues to elude detection in any astronomical source.

astro-ph.GA↗

Detections of interstellar 2-cyanopyrene and 4-cyanopyrene in TMC-1

Polycyclic aromatic hydrocarbons (PAHs) are among the most ubiquitous compounds in the universe, accounting for up to ~25% of all interstellar carbon. Since most unsubstituted PAHs do not possess permanent dipole moments, they are invisible to radio astronomy. Constraining their abundances relies on the detection of polar chemical proxies, such as aromatic nitriles. We report the detection of 2- and 4-cyanopyrene, isomers of the recently detected 1-cyanopyrene. We find that these isomers are present in an abundance ratio of ~2:1:2, which mirrors the number of equivalent sites available for CN addition. We conclude that there is evidence that the cyanopyrene isomers formed by direct CN addition to pyrene under kinetic control in hydrogen-rich gas at 10 K and discuss constraints on the H/CN ratio for PAHs in TMC-1.

astro-ph.GA↗

On the origin of infrared bands attributed to tryptophan in Spitzer observations of IC 348

Infrared emission features toward interstellar gas of the IC 348 star cluster in Perseus have been recently proposed to originate from the amino acid tryptophan. The assignment was based on laboratory infrared spectra of tryptophan pressed into pellets, a method which is known to cause large frequency shifts compared to the gas phase. We assess the validity of the assignment based on the original Spitzer data as well as new data from JWST. In addition, we report new spectra of tryptophan condensed in para-hydrogen matrices to compare with the observed spectra. The JWST MIRI data do not show evidence for tryptophan, despite deeper integration toward IC 348. In addition, we show that several of the lines attributed to tryptophan are likely due to instrumental artifacts. This, combined with the new laboratory data, allows us to conclude that there is no compelling evidence for the tryptophan assignment.

astro-ph.GA↗