arXiv subjects

Tine Jess

Publications and source records attributed to Tine Jess.

3 recordsLinked to original sources

arXiv2025

Graph Mixing Additive Networks

We introduce GMAN, a flexible, interpretable, and expressive framework that extends Graph Neural Additive Networks (GNANs) to learn from sets of sparse time-series data. GMAN represents each time-dependent trajectory as a directed graph and applies an enriched, more expressive GNAN to each graph. It allows users to control the interpretability-expressivity trade-off by grouping features and graphs to encode priors, and it provides feature, node, and graph-level interpretability. On real-world datasets, including mortality prediction from blood tests and fake-news detection, GMAN outperforms strong non-interpretable black-box baselines while delivering actionable, domain-aligned explanations.

cs.LG↗

arXiv2025

SuperMAN: Interpretable and Expressive Networks over Temporally Sparse Heterogeneous Data

Real-world temporal data often consists of multiple signal types recorded at irregular, asynchronous intervals. For instance, in the medical domain, different types of blood tests can be measured at different times and frequencies, resulting in fragmented and unevenly scattered temporal data. Similar issues of irregular sampling occur in other domains, such as the monitoring of large systems using event log files. Effectively learning from such data requires handling sets of temporal sparse and heterogeneous signals. In this work, we propose Super Mixing Additive Networks (SuperMAN), a novel and interpretable-by-design framework for learning directly from such heterogeneous signals, by modeling them as sets of implicit graphs. SuperMAN provides diverse interpretability capabilities, including node-level, graph-level, and subset-level importance, and enables practitioners to trade finer-grained interpretability for greater expressivity when domain priors are available. SuperMAN achieves state-of-the-art performance in real-world high-stakes tasks, including predicting Crohn's disease onset and hospital length of stay from routine blood test measurements and detecting fake news. Furthermore, we demonstrate how SuperMAN's interpretability properties assist in revealing disease development phase transitions and provide crucial insights in the healthcare domain.

cs.LG↗

arXiv2025

Identifying Critical Phases for Disease Onset with Sparse Haematological Biomarkers

Routinely collected clinical blood tests are an emerging molecular data source for large-scale biomedical research but inherently feature irregular sampling and informative observation. Traditional approaches rely on imputation, which can distort learning signals and bias predictions while lacking biological interpretability. We propose a novel methodology using Graph Neural Additive Networks (GNAN) to model biomarker trajectories as time-weighted directed graphs, where nodes represent sampling events and edges encode the time delta between events. GNAN's additive structure enables the explicit decomposition of feature and temporal contributions, allowing the detection of critical disease-associated time points. Unlike conventional imputation-based approaches, our method preserves the temporal structure of sparse data without introducing artificial biases and provides inherently interpretable predictions by decomposing contributions from each biomarker and time interval. This makes our model clinically applicable, as well as allowing it to discover biologically meaningful disease signatures.

q-bio.QM↗