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Tobias Heindel

Publications and source records attributed to Tobias Heindel.

41 records · Page 3Linked to original sources

The algebras of graph rewriting

The concept of diagrammatic combinatorial Hopf algebras in the form introduced for describing the Heisenberg-Weyl algebra in~\cite{blasiak2010combinatorial} is extended to the case of so-called rule diagrams that present graph rewriting rules and their composites. The resulting rule diagram algebra may then be suitably restricted in four different ways to what we call the rule algebras, which are non-commutative, unital associative algebras that implement the algebra of compositions of graph rewriting rules. Notably, our framework reveals that there exist two more types of graph rewriting systems than previously known in the literature, and we present an analysis of the structure of the rule algebras as well as a form of Poincaré-Birkhoff-Witt theorem for the rule diagram algebra. Our work lays the foundation for a fundamentally new way of analyzing graph transformation systems, and embeds this very important concept from theoretical computer science firmly into the realm of mathematical combinatorics and statistical physics.

math-ph↗

Computational Complexity of Interactive Behaviors

The theory of computational complexity focuses on functions and, hence, studies programs whose interactive behavior is reduced to a simple question/answer pattern. We propose a broader theory whose ultimate goal is expressing and analyzing the intrinsic difficulty of fully general interactive behaviors. To this extent, we use standard tools from concurrency theory, including labelled transition systems (formalizing behaviors) and their asynchronous extension (providing causality information). Behaviors are implemented by means of a multiprocessor machine executing CCS-like processes. The resulting theory is shown to be consistent with the classical definitions: when we restrict to functional behaviors (i.e., question/answer patterns), we recover several standard computational complexity classes.

cs.CC↗

Structured Operational Semantics for Graph Rewriting

Process calculi and graph transformation systems provide models of reactive systems with labelled transition semantics. While the semantics for process calculi is compositional, this is not the case for graph transformation systems, in general. Hence, the goal of this article is to obtain a compositional semantics for graph transformation system in analogy to the structural operational semantics (SOS) for Milner's Calculus of Communicating Systems (CCS). The paper introduces an SOS style axiomatization of the standard labelled transition semantics for graph transformation systems. The first result is its equivalence with the so-called Borrowed Context technique. Unfortunately, the axiomatization is not compositional in the expected manner as no rule captures "internal" communication of sub-systems. The main result states that such a rule is derivable if the given graph transformation system enjoys a certain property, which we call "complementarity of actions". Archetypal examples of such systems are interaction nets. We also discuss problems that arise if "complementarity of actions" is violated.

cs.LO↗

Being Van Kampen is a universal property

Colimits that satisfy the Van Kampen condition have interesting exactness properties. We show that the elementary presentation of the Van Kampen condition is actually a characterisation of a universal property in the associated bicategory of spans. The main theorem states that Van Kampen cocones are precisely those diagrams in a category that induce bicolimit diagrams in its associated bicategory of spans, provided that the category has pullbacks and enough colimits.

math.CT↗

Structural Decomposition of Reactions of Graph-Like Objects

Inspired by decomposition problems in rule-based formalisms in Computational Systems Biology and recent work on compositionality in graph transformation, this paper proposes to use arbitrary colimits to "deconstruct" models of reactions in which states are represented as objects of adhesive categories. The fundamental problem is the decomposition of complex reactions of large states into simpler reactions of smaller states. The paper defines the local decomposition problem for transformations. To solve this problem means to "reconstruct" a given transformation as the colimit of "smaller" ones where the shape of the colimit and the decomposition of the source object of the transformation are fixed in advance. The first result is the soundness of colimit decomposition for arbitrary double pushout transformations in any category, which roughly means that several "local" transformations can be combined into a single "global" one. Moreover, a solution for a certain class of local decomposition problems is given, which generalizes and clarifies recent work on compositionality in graph transformation.

cs.LO↗