arXiv subjects

Tobias Isenberg

Publications and source records attributed to Tobias Isenberg.

At least 19 recordsLinked to original sources

arXiv2026

More Than 63% of IEEE VIS Research Liable to be Retracted?! Ethics Approval Statements Protect Participants (and Researchers!)

We analyzed the ethics reporting in 255 IEEE VIS papers from 2024 and 2025, as published in TVCG. This analysis arose from our experience as readers and reviewers of IEEE VIS papers that such reporting is frequently incomplete or missing, as well as from investigations in which we ourselves had to answer challenges regarding ethics approval in our own work. Visualization research naturally often involves human participants, yet ethics approval and informed-consent procedures are not always explicitly reported. In our corpus, 189 papers (74.1%) reported on work involving human participants. Only 6 of them (3.2%) reported to have obtained ethics approval, an approval identifier, and having received informed consent from the participants, while 26 (13.8%) reported at least ethics approval and informed consent. These omissions do not imply that the empirical work was unethical or lacked approval. They rather show that current reporting practices make ethical approval difficult to assess. Beyond our alarming - yet true - paper title, we wish to raise awareness on how authors themselves may eventually be at risk for not properly reporting ethics. We argue that VIS should adopt clearer and more standardized ethics-reporting practices to protect participants, authors, reviewers, and editors.

cs.HC↗

arXiv2026

ScaleFree: Dynamic KDE for Multiscale Point Cloud Exploration in VR

We present ScaleFree, a GPU-accelerated adaptive Kernel Density Estimation (KDE) algorithm for scalable, interactive multiscale point cloud exploration. With this technique, we cater to the massive datasets and complex multiscale structures in advanced scientific computing, such as cosmological simulations with billions of particles. Effective exploration of such data requires a full 3D understanding of spatial structures, a capability for which immersive environments such as VR are particularly well suited. However, simultaneously supporting global multiscale context and fine-grained local detail remains a significant challenge. A key difficulty lies in dynamically generating continuous density fields from point clouds to facilitate the seamless scale transitions: while KDE is widely used, precomputed fields restrict the accuracy of interaction and omit fine-scale structures, while dynamic computation is often too costly for real-time VR interaction. We address this challenge by leveraging GPU acceleration with k-d-tree-based spatial queries and parallel reduction within a thread group for on-the-fly density estimation. With this approach, we can recalculate scalar fields dynamically as users shift their focus across scales. We demonstrate the benefits of adaptive density estimation through two data exploration tasks: adaptive selection and progressive navigation. Through performance experiments, we demonstrate that ScaleFree with GPU-parallel implementation achieves orders-of-magnitude speedups over sequential and multi-core CPU baselines. In a controlled experiment, we further confirm that our adaptive selection technique improves accuracy and efficiency in multiscale selection tasks.

cs.HC↗

arXiv2026

Piloting Planetarium Visualizations with LLMs during Live Events in Science Centers

We designed and evaluated an AI pilot in a planetarium visualization software, OpenSpace, for public shows in science centers. The piloting role is usually given to a human working in close collaboration with the guide on stage. We recruited 7 professional guides with extensive experience in giving shows to the public to study the impact of the AI-piloting on the overall experience. The AI-pilot is a conversational AI-agent listening to the guide and interpreting the verbal statements as commands to execute camera motions, change simulation time, or toggle visual assets. Our results show that, while AI pilots lack several critical skills for live shows, they could become useful as co-pilots to reduce workload of human pilots and allow multitasking. We propose research directions toward implementing visualization pilots and co-pilots in live settings.

cs.HC↗

arXiv2026

State of the Art of LLM-Enabled Interaction with Visualization

We report on a systematic, PRISMA-guided survey of research at the intersection of LLMs and visualization, with a particular focus on visio-verbal interaction -- where verbal and visual modalities converge to support data sense-making. The emergence of Large Language Models (LLMs) has introduced new paradigms for interacting with data visualizations through natural language, leading to intuitive, multimodal, and accessible interfaces. We analyze 48 papers across six dimensions: application domain, visualization task, visualization representation, interaction modality, LLM integration, and system evaluation. Our classification framework maps LLM roles across the visualization pipeline, from data querying and transformation to visualization generation, explanation, and navigation. We highlight emerging design patterns, identify gaps in accessibility and visualization reading, and discuss the limitations of current LLMs in spatial reasoning and contextual grounding. We further reflect on evaluations of combined LLM-visualization systems, highlighting how current research projects tackle this challenge and discuss current gaps in conducting meaningful evaluations of such systems. With our survey we aim to guide future research and system design in LLM-enhanced visualization, supporting broad audiences and intelligent, conversational interfaces.

cs.HC↗

arXiv2025

Reframing Pattern: A Comprehensive Approach to a Composite Visual Variable

We present a new comprehensive theory for explaining, exploring, and using pattern as a visual variable in visualization. Although patterns have long been used for data encoding and continue to be valuable today, their conceptual foundations are precarious: the concepts and terminology used across the research literature and in practice are inconsistent, making it challenging to use patterns effectively and to conduct research to inform their use. To address this problem, we conduct a comprehensive cross-disciplinary literature review that clarifies ambiguities around the use of "pattern" and "texture". As a result, we offer a new consistent treatment of pattern as a composite visual variable composed of structured groups of graphic primitives that can serve as marks for encoding data individually and collectively. This new and widely applicable formulation opens a sizable design space for the visual variable pattern, which we formalize as a new system comprising three sets of variables: the spatial arrangement of primitives, the appearance relationships among primitives, and the retinal visual variables that characterize individual primitives. We show how our pattern system relates to existing visualization theory and highlight opportunities for visualization design. We further explore patterns based on complex spatial arrangements, demonstrating explanatory power and connecting our conceptualization to broader theory on maps and cartography. An author version and additional materials are available on OSF: osf.io/z7ae2.

cs.HC↗

arXiv2025

A Design Space for Visualization Transitions of 3D Spatial Data in Hybrid AR-Desktop Environments

We present a design space for animated transitions of the appearance of 3D spatial datasets in a hybrid Augmented Reality (AR)-desktop context. Such hybrid interfaces combine both traditional and immersive displays to facilitate the exploration of 2D and 3D data representations in the environment in which they are best displayed. One key aspect is to introduce transitional animations that change between the different dimensionalities to illustrate the connection between the different representations and to reduce the potential cognitive load on the user. The specific transitions to be used depend on the type of data, the needs of the application domain, and other factors. We summarize these as a transition design space to simplify the decision-making process and provide inspiration for future designs. First, we discuss 3D visualizations from a spatial perspective: a spatial encoding pipeline, where 3D data sampled from the physical world goes through various transformations, being mapped to visual representations, and then being integrated into a hybrid AR-desktop environment. The transition design then focuses on interpolating between two spatial encoding pipelines to provide a smooth experience. To illustrate the use of our design space, we apply it to three case studies that focus on applications in astronomy, radiology, and chemistry; we then discuss lessons learned from these applications.

cs.GR↗

arXiv2025

Designing Semantically-Resonant Abstract Patterns for Data Visualization

We present a structured design methodology for creating semantically-resonant abstract patterns, making the pattern design process accessible to the general public. Semantically-resonant patterns are those that intuitively evoke the concept they represent within a specific set (e.g., in a vegetable concept set, small dots for olives and large dots for tomatoes), analogous to the concept of semantically-resonant colors (e.g., using olive green for olives and red for tomatoes). Previous research has shown that semantically-resonant colors can improve chart reading speed, and designers have made attempts to integrate semantic cues into abstract pattern designs. However, a systematic framework for developing such patterns was lacking. To bridge this gap, we conducted a series of workshops with design experts, resulting in a design methodology that summarizes the methodology for designing semantically-resonant abstract patterns. We evaluated our design methodology through another series of workshops with non-design participants. The results indicate that our proposed design methodology effectively supports the general public in designing semantically-resonant abstract patterns for both abstract and concrete concepts.

cs.HC↗

arXiv2025

Traversing Dual Realities: Investigating Techniques for Transitioning 3D Objects between Desktop and Augmented Reality Environments

Desktop environments can integrate augmented reality (AR) head-worn devices to support 3D representations, visualizations, and interactions in a novel yet familiar setting. As users navigate across the dual realities -- desktop and AR -- a way to move 3D objects between them is needed. We devise three baseline transition techniques based on common approaches in the literature and evaluate their usability and practicality in an initial user study (N=18). After refining both our transition techniques and the surrounding technical setup, we validate the applicability of the overall concept for real-world activities in an expert user study (N=6). In it, computational chemists followed their usual desktop workflows to build, manipulate, and analyze 3D molecular structures, but now aided with the addition of AR and our transition techniques. Based on our findings from both user studies, we provide lessons learned and takeaways for the design of 3D object transition techniques in desktop + AR environments.

cs.HC↗

arXiv2024

The State of Reproducibility Stamps for Visualization Research Papers

I analyze the evolution of papers certified by the Graphics Replicability Stamp Initiative (GRSI) to be reproducible, with a specific focus on the subset of publications that address visualization-related topics. With this analysis I show that, while the number of papers is increasing overall and within the visualization field, we still have to improve quite a bit to escape the replication crisis. I base my analysis on the data published by the GRSI as well as publication data for the different venues in visualization and lists of journal papers that have been presented at visualization-focused conferences. I also analyze the differences between the involved journals as well as the percentage of reproducible papers in the different presentation venues. Furthermore, I look at the authors of the publications and, in particular, their affiliation countries to see where most reproducible papers come from. Finally, I discuss potential reasons for the low reproducibility numbers and suggest possible ways to overcome these obstacles. This paper is reproducible itself, with source code and data available from github.com/tobiasisenberg/Visualization-Reproducibility as well as a free paper copy and all supplemental materials at osf.io/mvnbj.

cs.GR↗

arXiv2024

PREVis: Perceived Readability Evaluation for Visualizations

We developed and validated an instrument to measure the perceived readability in data visualization: PREVis. Researchers and practitioners can easily use this instrument as part of their evaluations to compare the perceived readability of different visual data representations. Our instrument can complement results from controlled experiments on user task performance or provide additional data during in-depth qualitative work such as design iterations when developing a new technique. Although readability is recognized as an essential quality of data visualizations, so far there has not been a unified definition of the construct in the context of visual representations. As a result, researchers often lack guidance for determining how to ask people to rate their perceived readability of a visualization. To address this issue, we engaged in a rigorous process to develop the first validated instrument targeted at the subjective readability of visual data representations. Our final instrument consists of 11 items across 4 dimensions: understandability, layout clarity, readability of data values, and readability of data patterns. We provide the questionnaire as a document with implementation guidelines on osf.io/9cg8j. Beyond this instrument, we contribute a discussion of how researchers have previously assessed visualization readability, and an analysis of the factors underlying perceived readability in visual data representations.

cs.HC↗

arXiv2024

SpatialTouch: Exploring Spatial Data Visualizations in Cross-reality

We propose and study a novel cross-reality environment that seamlessly integrates a monoscopic 2D surface (an interactive screen with touch and pen input) with a stereoscopic 3D space (an augmented reality HMD) to jointly host spatial data visualizations. This innovative approach combines the best of two conventional methods of displaying and manipulating spatial 3D data, enabling users to fluidly explore diverse visual forms using tailored interaction techniques. Providing such effective 3D data exploration techniques is pivotal for conveying its intricate spatial structures -- often at multiple spatial or semantic scales -- across various application domains and requiring diverse visual representations for effective visualization. To understand user reactions to our new environment, we began with an elicitation user study, in which we captured their responses and interactions. We observed that users adapted their interaction approaches based on perceived visual representations, with natural transitions in spatial awareness and actions while navigating across the physical surface. Our findings then informed the development of a design space for spatial data exploration in cross-reality. We thus developed cross-reality environments tailored to three distinct domains: for 3D molecular structure data, for 3D point cloud data, and for 3D anatomical data. In particular, we designed interaction techniques that account for the inherent features of interactions in both spaces, facilitating various forms of interaction, including mid-air gestures, touch interactions, pen interactions, and combinations thereof, to enhance the users' sense of presence and engagement. We assessed the usability of our environment with biologists, focusing on its use for domain research. In addition, we evaluated our interaction transition designs with virtual and mixed-reality experts to gather further insights.

cs.HC↗

arXiv2024

The Language of Infographics: Toward Understanding Conceptual Metaphor Use in Scientific Storytelling

We apply an approach from cognitive linguistics by mapping Conceptual Metaphor Theory (CMT) to the visualization domain to address patterns of visual conceptual metaphors that are often used in science infographics. Metaphors play an essential part in visual communication and are frequently employed to explain complex concepts. However, their use is often based on intuition, rather than following a formal process. At present, we lack tools and language for understanding and describing metaphor use in visualization to the extent where taxonomy and grammar could guide the creation of visual components, e.g., infographics. Our classification of the visual conceptual mappings within scientific representations is based on the breakdown of visual components in existing scientific infographics. We demonstrate the development of this mapping through a detailed analysis of data collected from four domains (biomedicine, climate, space, and anthropology) that represent a diverse range of visual conceptual metaphors used in the visual communication of science. This work allows us to identify patterns of visual conceptual metaphor use within the domains, resolve ambiguities about why specific conceptual metaphors are used, and develop a better overall understanding of visual metaphor use in scientific infographics. Our analysis shows that ontological and orientational conceptual metaphors are the most widely applied to translate complex scientific concepts. To support our findings we developed a visual exploratory tool based on the collected database that places the individual infographics on a spatio-temporal scale and illustrates the breakdown of visual conceptual metaphors.

cs.IR↗

arXiv2024

DiffFit: Visually-Guided Differentiable Fitting of Molecule Structures to a Cryo-EM Map

We introduce DiffFit, a differentiable algorithm for fitting protein atomistic structures into an experimental reconstructed Cryo-Electron Microscopy (cryo-EM) volume map. In structural biology, this process is necessary to semi-automatically composite large mesoscale models of complex protein assemblies and complete cellular structures that are based on measured cryo-EM data. The current approaches require manual fitting in three dimensions to start, resulting in approximately aligned structures followed by an automated fine-tuning of the alignment. The DiffFit approach enables domain scientists to fit new structures automatically and visualize the results for inspection and interactive revision. The fitting begins with differentiable three-dimensional (3D) rigid transformations of the protein atom coordinates followed by sampling the density values at the atom coordinates from the target cryo-EM volume. To ensure a meaningful correlation between the sampled densities and the protein structure, we proposed a novel loss function based on a multi-resolution volume-array approach and the exploitation of the negative space. This loss function serves as a critical metric for assessing the fitting quality, ensuring the fitting accuracy and an improved visualization of the results. We assessed the placement quality of DiffFit with several large, realistic datasets and found it to be superior to that of previous methods. We further evaluated our method in two use cases: automating the integration of known composite structures into larger protein complexes and facilitating the fitting of predicted protein domains into volume densities to aid researchers in identifying unknown proteins. We implemented our algorithm as an open-source plugin (github.com/nanovis/DiffFit) in ChimeraX, a leading visualization software in the field. All supplemental materials are available at osf.io/5tx4q.

q-bio.QM↗

arXiv2024

An Image-based Typology for Visualization

We present and discuss the results of a qualitative analysis of visualization images to derive an image-based typology of visualizations. For each image, we seek to identify its main focus or the essential stimuli. As a result, we derived 10 image-based visualization types. We describe coding decisions we made in the derivation process. The resulting image typology can serve a number of purposes: enabling researchers and practitioners to identify visual design styles, facilitating the categorization of visualization images for the purpose of research and teaching, enabling researchers to study the evolution of the community and its research output over time, and facilitating a discussion of standardization in visualization. In addition, the tool and dataset enable scholars to closely examine the images and how they are published and communicated in our community. osf.io/dxjwt presents a pre-registration and all supplemental materials.

cs.HC↗

arXiv2024

A Survey of Designs for Combined 2D+3D Visual Representations

We examine visual representations of data that make use of combinations of both 2D and 3D data mappings. Combining 2D and 3D representations is a common technique that allows viewers to understand multiple facets of the data with which they are interacting. While 3D representations focus on the spatial character of the data or the dedicated 3D data mapping, 2D representations often show abstract data properties and take advantage of the unique benefits of mapping to a plane. Many systems have used unique combinations of both types of data mappings effectively. Yet there are no systematic reviews of the methods in linking 2D and 3D representations. We systematically survey the relationships between 2D and 3D visual representations in major visualization publications -- IEEE VIS, IEEE TVCG, and EuroVis -- from 2012 to 2022. We closely examined 105 papers where 2D and 3D representations are connected visually, interactively, or through animation. These approaches are designed based on their visual environment, the relationships between their visual representations, and their possible layouts. Through our analysis, we introduce a design space as well as provide design guidelines for effectively linking 2D and 3D visual representations.

cs.HC↗

arXiv2023

Data Embroidery with Black-and-White Textures

We investigated data embroidery with black-and-white textures, identifying challenges in the use of textures for machine embroidery based on our own experience. Data embroidery, as a method of physically representing data, offers a unique way to integrate personal data into one's everyday fabric-based objects. Owing to their monochromatic characteristics, black-and-white textures promise to be easy to employ in machine embroidery. We experimented with different textured visualizations designed by experts and, in this paper, we detail our workflow and evaluate the performance and suitability of different textures. We then conducted a survey on vegetable preferences within a family and created a canvas bag as a case study, featuring the embroidered family data to show how embroidered data can be used in practice.

cs.HC↗

arXiv2023

MeTACAST: Target- and Context-aware Spatial Selection in VR

We propose three novel spatial data selection techniques for particle data in VR visualization environments. They are designed to be target- and context-aware and be suitable for a wide range of data features and complex scenarios. Each technique is designed to be adjusted to particular selection intents: the selection of consecutive dense regions, the selection of filament-like structures, and the selection of clusters -- with all of them facilitating post-selection threshold adjustment. These techniques allow users to precisely select those regions of space for further exploration -- with simple and approximate 3D pointing, brushing, or drawing input -- using flexible point- or path-based input and without being limited by 3D occlusions, non-homogeneous feature density, or complex data shapes. These new techniques are evaluated in a controlled experiment and compared with the Baseline method, a region-based 3D painting selection. Our results indicate that our techniques are effective in handling a wide range of scenarios and allow users to select data based on their comprehension of crucial features. Furthermore, we analyze the attributes, requirements, and strategies of our spatial selection methods and compare them with existing state-of-the-art selection methods to handle diverse data features and situations. Based on this analysis we provide guidelines for choosing the most suitable 3D spatial selection techniques based on the interaction environment, the given data characteristics, or the need for interactive post-selection threshold adjustment.

cs.HC↗

arXiv2023

Design Characterization for Black-and-White Textures in Visualization

We investigate the use of 2D black-and-white textures for the visualization of categorical data and contribute a summary of texture attributes, and the results of three experiments that elicited design strategies as well as aesthetic and effectiveness measures. Black-and-white textures are useful, for instance, as a visual channel for categorical data on low-color displays, in 2D/3D print, to achieve the aesthetic of historic visualizations, or to retain the color hue channel for other visual mappings. We specifically study how to use what we call geometric and iconic textures. Geometric textures use patterns of repeated abstract geometric shapes, while iconic textures use repeated icons that may stand for data categories. We parameterized both types of textures and developed a tool for designers to create textures on simple charts by adjusting texture parameters. 30 visualization experts used our tool and designed 66 textured bar charts, pie charts, and maps. We then had 150 participants rate these designs for aesthetics. Finally, with the top-rated geometric and iconic textures, our perceptual assessment experiment with 150 participants revealed that textured charts perform about equally well as non-textured charts, and that there are some differences depending on the type of chart.

cs.HC↗