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Tobias Weber

Publications and source records attributed to Tobias Weber.

At least 37 records · Page 2Linked to original sources

Automated wildlife image classification: An active learning tool for ecological applications

Wildlife camera trap images are being used extensively to investigate animal abundance, habitat associations, and behavior, which is complicated by the fact that experts must first classify the images manually. Artificial intelligence systems can take over this task but usually need a large number of already-labeled training images to achieve sufficient performance. This requirement necessitates human expert labor and poses a particular challenge for projects with few cameras or short durations. We propose a label-efficient learning strategy that enables researchers with small or medium-sized image databases to leverage the potential of modern machine learning, thus freeing crucial resources for subsequent analyses. Our methodological proposal is two-fold: (1) We improve current strategies of combining object detection and image classification by tuning the hyperparameters of both models. (2) We provide an active learning (AL) system that allows training deep learning models very efficiently in terms of required human-labeled training images. We supply a software package that enables researchers to use these methods directly and thereby ensure the broad applicability of the proposed framework in ecological practice. We show that our tuning strategy improves predictive performance. We demonstrate how the AL pipeline reduces the amount of pre-labeled data needed to achieve a specific predictive performance and that it is especially valuable for improving out-of-sample predictive performance. We conclude that the combination of tuning and AL increases predictive performance substantially. Furthermore, we argue that our work can broadly impact the community through the ready-to-use software package provided. Finally, the publication of our models tailored to European wildlife data enriches existing model bases mostly trained on data from Africa and North America.

cs.CV↗

Neutron polarisation correction to triple-axis data with analytical derivations

Polarised neutron scattering is the method of choice to study magnetism in condensed matter. Polarised neutrons are typically very low in flux, and complex experimental configurations further reduce the count rate. Neutron polarisation corrections would therefore be needed. Here we analytically derive formulae of the corrected partial differential scattering cross-sections. The analytical method is designed for the longitudinal polarisation analysis, and the correction generally holds for time-independent polarised neutrons with a triple-axis spectrometer. We then apply the correction to recent results of our $P_x$ experiment on Y$_3$Fe$_5$O$_{12}$. Although there is a difficulty with the experimental determination of inefficiency parameters of neutron spin polarisers and flippers, the correction appears to work properly.

cond-mat.str-el↗

Motion Planning for Triple-Axis Spectrometers

We present the free and open source software TAS-Paths, a novel system which calculates optimal, collision-free paths for the movement of triple-axis spectrometers. The software features an easy to use graphical user interface, but can also be scripted and used as a library. It allows the user to plan and visualise the motion of the instrument before the experiment and can be used during measurements to circumvent obstacles. The instrument path is calculated in angular configuration space in order to keep a maximum angular distance from any obstacle.

physics.ins-det↗

Cascaded Latent Diffusion Models for High-Resolution Chest X-ray Synthesis

While recent advances in large-scale foundational models show promising results, their application to the medical domain has not yet been explored in detail. In this paper, we progress into the realms of large-scale modeling in medical synthesis by proposing Cheff - a foundational cascaded latent diffusion model, which generates highly-realistic chest radiographs providing state-of-the-art quality on a 1-megapixel scale. We further propose MaCheX, which is a unified interface for public chest datasets and forms the largest open collection of chest X-rays up to date. With Cheff conditioned on radiological reports, we further guide the synthesis process over text prompts and unveil the research area of report-to-chest-X-ray generation.

eess.IV↗

ChatGPT Makes Medicine Easy to Swallow: An Exploratory Case Study on Simplified Radiology Reports

The release of ChatGPT, a language model capable of generating text that appears human-like and authentic, has gained significant attention beyond the research community. We expect that the convincing performance of ChatGPT incentivizes users to apply it to a variety of downstream tasks, including prompting the model to simplify their own medical reports. To investigate this phenomenon, we conducted an exploratory case study. In a questionnaire, we asked 15 radiologists to assess the quality of radiology reports simplified by ChatGPT. Most radiologists agreed that the simplified reports were factually correct, complete, and not potentially harmful to the patient. Nevertheless, instances of incorrect statements, missed key medical findings, and potentially harmful passages were reported. While further studies are needed, the initial insights of this study indicate a great potential in using large language models like ChatGPT to improve patient-centered care in radiology and other medical domains.

cs.CL↗

Towards modelling hazard factors in unstructured data spaces using gradient-based latent interpolation

The application of deep learning in survival analysis (SA) allows utilizing unstructured and high-dimensional data types uncommon in traditional survival methods. This allows to advance methods in fields such as digital health, predictive maintenance, and churn analysis, but often yields less interpretable and intuitively understandable models due to the black-box character of deep learning-based approaches. We close this gap by proposing 1) a multi-task variational autoencoder (VAE) with survival objective, yielding survival-oriented embeddings, and 2) a novel method HazardWalk that allows to model hazard factors in the original data space. HazardWalk transforms the latent distribution of our autoencoder into areas of maximized/minimized hazard and then uses the decoder to project changes to the original domain. Our procedure is evaluated on a simulated dataset as well as on a dataset of CT imaging data of patients with liver metastases.

cs.LG↗

Survival-oriented embeddings for improving accessibility to complex data structures

Deep learning excels in the analysis of unstructured data and recent advancements allow to extend these techniques to survival analysis. In the context of clinical radiology, this enables, e.g., to relate unstructured volumetric images to a risk score or a prognosis of life expectancy and support clinical decision making. Medical applications are, however, associated with high criticality and consequently, neither medical personnel nor patients do usually accept black box models as reason or basis for decisions. Apart from averseness to new technologies, this is due to missing interpretability, transparency and accountability of many machine learning methods. We propose a hazard-regularized variational autoencoder that supports straightforward interpretation of deep neural architectures in the context of survival analysis, a field highly relevant in healthcare. We apply the proposed approach to abdominal CT scans of patients with liver tumors and their corresponding survival times.

cs.LG↗

Using Supervised Learning to Classify Metadata of Research Data by Discipline of Research

Automated classification of metadata of research data by their discipline(s) of research can be used in scientometric research, by repository service providers, and in the context of research data aggregation services. Openly available metadata of the DataCite index for research data were used to compile a large training and evaluation set comprised of 609,524 records, which is published alongside this paper. These data allow to reproducibly assess classification approaches, such as tree-based models and neural networks. According to our experiments with 20 base classes (multi-label classification), multi-layer perceptron models perform best with a f1-macro score of 0.760 closely followed by Long Short-Term Memory models (f1-macro score of 0.755). A possible application of the trained classification models is the quantitative analysis of trends towards interdisciplinarity of digital scholarly output or the characterization of growth patterns of research data, stratified by discipline of research. Both applications perform at scale with the proposed models which are available for re-use.

cs.IR↗

Solving Quadratic Programs to High Precision using Scaled Iterative Refinement

Quadratic optimization problems (QPs) are ubiquitous, and solution algorithms have matured to a reliable technology. However, the precision of solutions is usually limited due to the underlying floating-point operations. This may cause inconveniences when solutions are used for rigorous reasoning. We contribute on three levels to overcome this issue. First, we present a novel refinement algorithm to solve QPs to arbitrary precision. It iteratively solves refined QPs, assuming a floating-point QP solver oracle. We prove linear convergence of residuals and primal errors. Second, we provide an efficient implementation, based on SoPlex and qpOASES that is publicly available in source code. Third, we give precise reference solutions for the Maros and Mészáros benchmark library.

math.OC↗

Polarized inelastic neutron scattering of non-reciprocal spin waves in MnSi

We report spin-polarized inelastic neutron scattering of the dynamical structure factor of the conical magnetic helix in the cubic chiral magnet MnSi. We find that the spectral weight of spin-flip scattering processes is concentrated on single branches for wavevector transfer parallel to the helix axis as inferred from well-defined peaks in the neutron spectra. In contrast, for wavevector transfers perpendicular to the helix the spectral weight is distributed among different branches of the magnon band structure as reflected in broader features of the spectra. Taking into account the effects of instrumental resolution, our experimental results are in excellent quantitative agreement with parameter-free theoretical predictions. Whereas the dispersion of the spin waves in MnSi appears to be approximately reciprocal at low energies and small applied fields, the associated spin-resolved spectral weight displays a pronounced non-reciprocity that implies a distinct non-reciprocal response in the limit of vanishing uniform magnetization at zero magnetic field.

cond-mat.str-el↗

Plaquette instability competing with bicollinear ground state in detwinned FeTe

We use inelastic neutron scattering to show that long-range spin waves arising from the static bicollinear antiferromagnetic (AF) order in FeTe, which have twofold rotational symmetry in a fully detwinned crystal, rapidly dissolve above $E\approx 26$ meV into ridges of scattering with fourfold rotational symmetry and a nearly isotropic magnetic fluctuation spectrum. With increasing temperature above $T_N\approx 68$ K, the twofold spin waves change into broad regions of scattering with fourfold symmetry. Since the scattering patterns from plaquette magnetic order generated within a bilinear biquadratic Hamiltonian have fourfold rotational symmetry consistent with the high-energy, spin-isotropic spin waves of FeTe, we conclude that the bicollinear AF state in FeTe is quasidegenerate with plaquette magnetic order, providing evidence for the strongly frustrated nature of the local moments in iron chalcogenide family of iron-based superconductors.

cond-mat.str-el↗

Front-end electronic readout system for the Belle II imaging Time-Of-Propagation detector

The Time-Of-Propagation detector is a Cherenkov particle identification detector based on quartz radiator bars for the Belle II experiment at the SuperKEKB electron-positron collider. The purpose of the detector is to identify the type of charged hadrons produced in electron-positron collisions, and requires a single photon timing resolution below 100 picoseconds. A novel front-end electronic system was designed, built, and integrated to acquire data from the 8192 microchannel plate photomultiplier tube channels in the detector. Waveform sampling of these analog signals is done by switched-capacitor array application-specific integrated circuits. The processes of triggering, digitization of windows of interest, readout, and data transfer to the Belle II data acquisition system are managed by Xilinx Zynq-7000 programmable system on a chip devices.

physics.ins-det↗

Multi-Agent Reinforcement Learning for Energy Harvesting Two-Hop Communications with a Partially Observable State

We consider an energy harvesting (EH) transmitter communicating with a receiver through an EH relay. The harvested energy is used for data transmission, including the circuit energy consumption. As in practical scenarios, the system state, comprised by the harvested energy, battery levels, data buffer levels, and channel gains, is only partially observable by the EH nodes. Moreover, the EH nodes have only outdated knowledge regarding the channel gains for their own transmit channels. Our goal is to find distributed transmission policies aiming at maximizing the throughput. A channel predictor based on a Kalman filter is implemented in each EH node to estimate the current channel gain for its own channel. Furthermore, to overcome the partial observability of the system state, the EH nodes cooperate with each other to obtain information about their parameters during a signaling phase. We model the problem as a Markov game and propose a multi-agent reinforcement learning algorithm to find the transmission policies. We show the trade-off between the achievable throughput and the signaling required, and provide convergence guarantees for the proposed algorithm. Results show that even when the signaling overhead is taken into account, the proposed algorithm outperforms other approaches that do not consider cooperation.

cs.IT↗

Methods to Evaluate Lifecycle Models for Research Data Management

Lifecycle models for research data are often abstract and simple. This comes at the danger of oversimplifying the complex concepts of research data management. The analysis of 90 different lifecycle models lead to two approaches to assess the quality of these models. While terminological issues make direct comparisons of models hard, an empirical evaluation seems possible.

cs.DL↗

Non-reciprocal magnons in non-centrosymmetric MnSi

Using two cold-neutron triple-axis spectrometers we have succeeded in fully mapping out the field-dependent evolution of the non-reciprocal magnon dispersion relations in all magnetic phases of MnSi. The non-reciprocal nature of the dispersion manifests itself in a full asymmetry (non-reciprocity) of the dynamical structure factor $S(q, E, μ_0 H_{int})$ with respect to flipping either the direction of the applied magnetic field $μ_0 H_{int}$, the reduced momentum transfer $q$, or the energy transfer $E$.

cond-mat.str-el↗

How FAIR can you get? Image Retrieval as a Use Case to calculate FAIR Metrics

A large number of services for research data management strive to adhere to the FAIR guiding principles for scientific data management and stewardship. To evaluate these services and to indicate possible improvements, use-case-centric metrics are needed as an addendum to existing metric frameworks. The retrieval of spatially and temporally annotated images can exemplify such a use case. The prototypical implementation indicates that currently no research data repository achieves the full score. Suggestions on how to increase the score include automatic annotation based on the metadata inside the image file and support for content negotiation to retrieve the images. These and other insights can lead to an improvement of data integration workflows, resulting in a better and more FAIR approach to manage research data.

cs.CY↗

Field dependence of non-reciprocal magnons in chiral MnSi

Spin waves in chiral magnetic materials are strongly influenced by the Dzyaloshinskii-Moriya interaction resulting in intriguing phenomena like non-reciprocal magnon propagation and magnetochiral dichroism. Here, we study the non-reciprocal magnon spectrum of the archetypical chiral magnet MnSi and its evolution as a function of magnetic field covering the field-polarized and conical helix phase. Using inelastic neutron scattering, the magnon energies and their spectral weights are determined quantitatively after deconvolution with the instrumental resolution. In the field-polarized phase the imaginary part of the dynamical susceptibility $χ''(\varepsilon, {\bf q})$ is shown to be asymmetric with respect to wavevectors ${\bf q}$ longitudinal to the applied magnetic field ${\bf H}$, which is a hallmark of chiral magnetism. In the helimagnetic phase, $χ''(\varepsilon, {\bf q})$ becomes increasingly symmetric with decreasing ${\bf H}$ due to the formation of helimagnon bands and the activation of additional spinflip and non-spinflip scattering channels. The neutron spectra are in excellent quantitative agreement with the low-energy theory of cubic chiral magnets with a single fitting parameter being the damping rate of spin waves.

cond-mat.str-el↗

Implementation of Nonlinear Model Predictive Path-Following Control for an Industrial Robot

Many robotic applications, such as milling, gluing, or high precision measurements, require the exact following of a pre-defined geometric path. In this paper, we investigate the real-time feasible implementation of model predictive path-following control for an industrial robot. We consider constrained output path following with and without reference speed assignment. We present results from an implementation of the proposed model predictive path-following controller on a KUKA LWR IV robot.

eess.SY↗