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Tong Wang

Publications and source records attributed to Tong Wang.

At least 55 records · Page 3Linked to original sources

STARS: Shared-specific Translation and Alignment for missing-modality Remote Sensing Semantic Segmentation

Multimodal remote sensing technology significantly enhances the understanding of surface semantics by integrating heterogeneous data such as optical images, Synthetic Aperture Radar (SAR), and Digital Surface Models (DSM). However, in practical applications, the missing of modality data (e.g., optical or DSM) is a common and severe challenge, which leads to performance decline in traditional multimodal fusion models. Existing methods for addressing missing modalities still face limitations, including feature collapse and overly generalized recovered features. To address these issues, we propose \textbf{STARS} (\textbf{S}hared-specific \textbf{T}ranslation and \textbf{A}lignment for missing-modality \textbf{R}emote \textbf{S}ensing), a robust semantic segmentation framework for incomplete multimodal inputs. STARS is built on two key designs. First, we introduce an asymmetric alignment mechanism with bidirectional translation and stop-gradient, which effectively prevents feature collapse and reduces sensitivity to hyperparameters. Second, we propose a Pixel-level Semantic sampling Alignment (PSA) strategy that combines class-balanced pixel sampling with cross-modality semantic alignment loss, to mitigate alignment failures caused by severe class imbalance and improve minority-class recognition.

cs.CV↗

Artificial Intelligence for Microbiology and Microbiome Research

Advancements in artificial intelligence (AI) have transformed many scientific fields, with microbiology and microbiome research now experiencing significant breakthroughs through machine learning applications. This review provides a comprehensive overview of AI-driven approaches tailored for microbiology and microbiome studies, emphasizing both technical advancements and biological insights. We begin with an introduction to foundational AI techniques, including primary machine learning paradigms and various deep learning architectures, and offer guidance on choosing between traditional machine learning and sophisticated deep learning methods based on specific research goals. The primary section on application scenarios spans diverse research areas, from taxonomic profiling, functional annotation \& prediction, microbe-X interactions, microbial ecology, metabolic modeling, precision nutrition, clinical microbiology, to prevention \& therapeutics. Finally, we discuss challenges in this field and highlight some recent breakthroughs. Together, this review underscores AI's transformative role in microbiology and microbiome research, paving the way for innovative methodologies and applications that enhance our understanding of microbial life and its impact on our planet and our health.

q-bio.QM↗

A Conditional Distribution Equality Testing Framework using Deep Generative Learning

In this paper, we propose a general framework for testing the conditional distribution equality in a two-sample problem, which is most relevant to covariate shift and causal discovery. Our framework is built on neural network-based generative methods and sample splitting techniques by transforming the conditional testing problem into an unconditional one. We introduce the generative classification accuracy-based conditional distribution equality test (GCA-CDET) to illustrate the proposed framework. We establish the convergence rate for the learned generator by deriving new results related to the recently-developed offset Rademacher complexity and prove the testing consistency of GCA-CDET under mild conditions.Empirically, we conduct numerical studies including synthetic datasets and two real-world datasets, demonstrating the effectiveness of our approach. Additional discussions on the optimality of the proposed framework are provided in the online supplementary material.

cs.LG↗

Diversity Has Always Been There in Your Visual Autoregressive Models

Visual Autoregressive (VAR) models have recently garnered significant attention for their innovative next-scale prediction paradigm, offering notable advantages in both inference efficiency and image quality compared to traditional multi-step autoregressive (AR) and diffusion models. However, despite their efficiency, VAR models often suffer from the diversity collapse i.e., a reduction in output variability, analogous to that observed in few-step distilled diffusion models. In this paper, we introduce DiverseVAR, a simple yet effective approach that restores the generative diversity of VAR models without requiring any additional training. Our analysis reveals the pivotal component of the feature map as a key factor governing diversity formation at early scales. By suppressing the pivotal component in the model input and amplifying it in the model output, DiverseVAR effectively unlocks the inherent generative potential of VAR models while preserving high-fidelity synthesis. Empirical results demonstrate that our approach substantially enhances generative diversity with only neglectable performance influences. Our code will be publicly released at https://github.com/wangtong627/DiverseVAR.

cs.CV↗

Does Bigger Mean Better? Comparitive Analysis of CNNs and Biomedical Vision Language Modles in Medical Diagnosis

The accurate interpretation of chest radiographs using automated methods is a critical task in medical imaging. This paper presents a comparative analysis between a supervised lightweight Convolutional Neural Network (CNN) and a state-of-the-art, zero-shot medical Vision-Language Model (VLM), BiomedCLIP, across two distinct diagnostic tasks: pneumonia detection on the PneumoniaMNIST benchmark and tuberculosis detection on the Shenzhen TB dataset. Our experiments show that supervised CNNs serve as highly competitive baselines in both cases. While the default zero-shot performance of the VLM is lower, we demonstrate that its potential can be unlocked via a simple yet crucial remedy: decision threshold calibration. By optimizing the classification threshold on a validation set, the performance of BiomedCLIP is significantly boosted across both datasets. For pneumonia detection, calibration enables the zero-shot VLM to achieve a superior F1-score of 0.8841, surpassing the supervised CNN's 0.8803. For tuberculosis detection, calibration dramatically improves the F1-score from 0.4812 to 0.7684, bringing it close to the supervised baseline's 0.7834. This work highlights a key insight: proper calibration is essential for leveraging the full diagnostic power of zero-shot VLMs, enabling them to match or even outperform efficient, task-specific supervised models.

cs.CV↗

Lightweight Baselines for Medical Abstract Classification: DistilBERT with Cross-Entropy as a Strong Default

The research evaluates lightweight medical abstract classification methods to establish their maximum performance capabilities under financial budget restrictions. On the public medical abstracts corpus, we finetune BERT base and Distil BERT with three objectives cross entropy (CE), class weighted CE, and focal loss under identical tokenization, sequence length, optimizer, and schedule. DistilBERT with plain CE gives the strongest raw argmax trade off, while a post hoc operating point selection (validation calibrated, classwise thresholds) sub stantially improves deployed performance; under this tuned regime, focal benefits most. We report Accuracy, Macro F1, and WeightedF1, release evaluation artifacts, and include confusion analyses to clarify error structure. The practical takeaway is to start with a compact encoder and CE, then add lightweight calibration or thresholding when deployment requires higher macro balance.

cs.CL↗

The Value of AI Advice: Personalized and Value-Maximizing AI Advisors Are Necessary to Reliably Benefit Experts and Organizations

Despite advances in AI's performance and interpretability, AI advisors can undermine experts' decisions and increase the time and effort experts must invest to make decisions. Consequently, AI systems deployed in high-stakes settings often fail to consistently add value across experts and organizations and can even diminish the value that experts alone provide. Beyond harm in specific domains, such outcomes impede progress in research and practice, underscoring the need to understand when and why different AI advisors add or diminish value. To bridge this gap, we stress the importance of assessing the value AI advice brings to real-world contexts when designing and evaluating AI advisors. Building on this perspective, we characterize key pillars -- pathways through which AI advice impacts value -- and develop a framework that incorporates these pillars to create reliable, personalized, and value-adding advisors. Our results highlight the need for value-driven development of AI advisors that advise selectively, are tailored to experts' unique behaviors, and are optimized for context-specific trade-offs between decision improvements and advising costs. They also reveal how the lack of inclusion of these pillars in the design of AI advising systems may be contributing to the failures observed in practical applications.

cs.HC↗

DefenderBench: A Toolkit for Evaluating Language Agents in Cybersecurity Environments

Large language model (LLM) agents have shown impressive capabilities in human language comprehension and reasoning, yet their potential in cybersecurity remains underexplored. We introduce DefenderBench, a practical, open-source toolkit for evaluating language agents across offense, defense, and cybersecurity knowledge-based tasks. DefenderBench includes environments for network intrusion, malicious content detection, code vulnerability analysis, and cybersecurity knowledge assessment. It is intentionally designed to be affordable and easily accessible for researchers while providing fair and rigorous assessment. We benchmark several state-of-the-art (SoTA) and popular LLMs, including both open- and closed-weight models, using a standardized agentic framework. Our results show that Claude-3.7-sonnet performs best with a DefenderBench score of 81.65, followed by Claude-3.7-sonnet-think with 78.40, while the best open-weight model, Llama 3.3 70B, is not far behind with a DefenderBench score of 71.81. DefenderBench's modular design allows seamless integration of custom LLMs and tasks, promoting reproducibility and fair comparisons. An anonymized version of DefenderBench is available at https://github.com/microsoft/DefenderBench.

cs.CL↗

Velocity and Density-Aware RRI Analysis and Optimization for AoI Minimization in IoV SPS

Addressing the problem of Age of Information (AoI) deterioration caused by packet collisions and vehicle speed-related channel uncertainties in Semi-Persistent Scheduling (SPS) for the Internet of Vehicles (IoV), this letter proposes an optimization approach based on Large Language Models (LLM) and Deep Deterministic Policy Gradient (DDPG). First, an AoI calculation model influenced by vehicle speed, vehicle density, and Resource Reservation Interval (RRI) is established, followed by the design of a dual-path optimization scheme. The DDPG is guided by the state space and reward function, while the LLM leverages contextual learning to generate optimal parameter configurations. Experimental results demonstrate that LLM can significantly reduce AoI after accumulating a small number of exemplars without requiring model training, whereas the DDPG method achieves more stable performance after training.

cs.LG↗

RayFusion: Ray Fusion Enhanced Collaborative Visual Perception

Collaborative visual perception methods have gained widespread attention in the autonomous driving community in recent years due to their ability to address sensor limitation problems. However, the absence of explicit depth information often makes it difficult for camera-based perception systems, e.g., 3D object detection, to generate accurate predictions. To alleviate the ambiguity in depth estimation, we propose RayFusion, a ray-based fusion method for collaborative visual perception. Using ray occupancy information from collaborators, RayFusion reduces redundancy and false positive predictions along camera rays, enhancing the detection performance of purely camera-based collaborative perception systems. Comprehensive experiments show that our method consistently outperforms existing state-of-the-art models, substantially advancing the performance of collaborative visual perception. The code is available at https://github.com/wangsh0111/RayFusion.

cs.CV↗

pFedSAM: Personalized Federated Learning of Segment Anything Model for Medical Image Segmentation

Medical image segmentation is crucial for computer-aided diagnosis, yet privacy constraints hinder data sharing across institutions. Federated learning addresses this limitation, but existing approaches often rely on lightweight architectures that struggle with complex, heterogeneous data. Recently, the Segment Anything Model (SAM) has shown outstanding segmentation capabilities; however, its massive encoder poses significant challenges in federated settings. In this work, we present the first personalized federated SAM framework tailored for heterogeneous data scenarios in medical image segmentation. Our framework integrates two key innovations: (1) a personalized strategy that aggregates only the global parameters to capture cross-client commonalities while retaining the designed L-MoE (Localized Mixture-of-Experts) component to preserve domain-specific features; and (2) a decoupled global-local fine-tuning mechanism that leverages a teacher-student paradigm via knowledge distillation to bridge the gap between the global shared model and the personalized local models, thereby mitigating overgeneralization. Extensive experiments on two public datasets validate that our approach significantly improves segmentation performance, achieves robust cross-domain adaptation, and reduces communication overhead.

cs.CV↗

Will Annotators Disagree? Identifying Subjectivity in Value-Laden Arguments

Aggregating multiple annotations into a single ground truth label may hide valuable insights into annotator disagreement, particularly in tasks where subjectivity plays a crucial role. In this work, we explore methods for identifying subjectivity in recognizing the human values that motivate arguments. We evaluate two main approaches: inferring subjectivity through value prediction vs. directly identifying subjectivity. Our experiments show that direct subjectivity identification significantly improves the model performance of flagging subjective arguments. Furthermore, combining contrastive loss with binary cross-entropy loss does not improve performance but reduces the dependency on per-label subjectivity. Our proposed methods can help identify arguments that individuals may interpret differently, fostering a more nuanced annotation process.

cs.CL↗

Defining a phylogenetic tree with the minimum number of small-state characters

Phylogenetic trees represent evolutionary relationships and can be uniquely defined by sets of finite-state biological characteristics. Despite prior work showing that sufficiently large trees can be determined by $r$-state character sets, the minimal leaf thresholds $n_r$ remain largely unknown. In this work, we establish the 3-state case as $n_3 = 8$, providing a concrete base for higher-state analyses. We then resolve the 5-state problem by constructing a counterexample for $n=15$ and proving that for $n \geq 16$, $\lceil (n-3)/4 \rceil$ 5-state characters suffice to uniquely define any tree. Our approach relies on rigorous mathematical induction with complete verification of base cases and logically consistent inductive steps, offering new insights into the minimal conditions for character-based tree identification.

q-bio.PE↗

Think Before You Segment: An Object-aware Reasoning Agent for Referring Audio-Visual Segmentation

Referring Audio-Visual Segmentation (Ref-AVS) aims to segment target objects in audible videos based on given reference expressions. Prior works typically rely on learning latent embeddings via multimodal fusion to prompt a tunable SAM/SAM2 decoder for segmentation, which requires strong pixel-level supervision and lacks interpretability. From a novel perspective of explicit reference understanding, we propose TGS-Agent, which decomposes the task into a Think-Ground-Segment process, mimicking the human reasoning procedure by first identifying the referred object through multimodal analysis, followed by coarse-grained grounding and precise segmentation. To this end, we first propose Ref-Thinker, a multimodal language model capable of reasoning over textual, visual, and auditory cues. We construct an instruction-tuning dataset with explicit object-aware think-answer chains for Ref-Thinker fine-tuning. The object description inferred by Ref-Thinker is used as an explicit prompt for Grounding-DINO and SAM2, which perform grounding and segmentation without relying on pixel-level supervision. Additionally, we introduce R\textsuperscript{2}-AVSBench, a new benchmark with linguistically diverse and reasoning-intensive references for better evaluating model generalization. Our approach achieves state-of-the-art results on both standard Ref-AVSBench and proposed R\textsuperscript{2}-AVSBench. Code will be available at https://github.com/jasongief/TGS-Agent.

cs.MM↗

OpenSeg-R: Improving Open-Vocabulary Segmentation via Step-by-Step Visual Reasoning

Open-Vocabulary Segmentation (OVS) has drawn increasing attention for its capacity to generalize segmentation beyond predefined categories. However, existing methods typically predict segmentation masks with simple forward inference, lacking explicit reasoning and interpretability. This makes it challenging for OVS model to distinguish similar categories in open-world settings due to the lack of contextual understanding and discriminative visual cues. To address this limitation, we propose a step-by-step visual reasoning framework for open-vocabulary segmentation, named OpenSeg-R. The proposed OpenSeg-R leverages Large Multimodal Models (LMMs) to perform hierarchical visual reasoning before segmentation. Specifically, we generate both generic and image-specific reasoning for each image, forming structured triplets that explain the visual reason for objects in a coarse-to-fine manner. Based on these reasoning steps, we can compose detailed description prompts, and feed them to the segmentor to produce more accurate segmentation masks. To the best of our knowledge, OpenSeg-R is the first framework to introduce explicit step-by-step visual reasoning into OVS. Experimental results demonstrate that OpenSeg-R significantly outperforms state-of-the-art methods on open-vocabulary semantic segmentation across five benchmark datasets. Moreover, it achieves consistent gains across all metrics on open-vocabulary panoptic segmentation. Qualitative results further highlight the effectiveness of our reasoning-guided framework in improving both segmentation precision and interpretability. Our code is publicly available at https://github.com/Hanzy1996/OpenSeg-R.

cs.CV↗

Understanding the fill-factor limit of organic solar cells

Although the power conversion efficiencies of organic solar cells (OSCs) have surpassed 20%, they still lag behind commercial inorganic solar cells and emerging perovskite solar cells. To bridge this efficiency gap, improving the fill factor (FF) is critical, provided other photovoltaic parameters are not compromised. However, the fundamental understanding of the FF in OSCs remains incomplete. In this work, we systematically investigate a wide range of OSCs with the FF values spanning 0.27 to 0.80, and analyse the effect of free charge generation and recombination on the FF in OSCs. To explain our observations, we developed an analytical model that quantitatively correlates the applied electric field with the energetics of excited states in donor-acceptor blends. By combining device characterisation, spectroscopy, and theoretical modelling, we reveal that the Stark effect and the field-dependent charge transfer significantly impact the FF in state-of-the-art OSCs with low voltage losses. Our findings highlight that suppressing geminate decay by increasing exciton lifetime is a promising strategy for boosting the FF and achieving future efficiency gains in OSCs.

cond-mat.mtrl-sci↗

Llama See, Llama Do: A Mechanistic Perspective on Contextual Entrainment and Distraction in LLMs

We observe a novel phenomenon, contextual entrainment, across a wide range of language models (LMs) and prompt settings, providing a new mechanistic perspective on how LMs become distracted by ``irrelevant'' contextual information in the input prompt. Specifically, LMs assign significantly higher logits (or probabilities) to any tokens that have previously appeared in the context prompt, even for random tokens. This suggests that contextual entrainment is a mechanistic phenomenon, occurring independently of the relevance or semantic relation of the tokens to the question or the rest of the sentence. We find statistically significant evidence that the magnitude of contextual entrainment is influenced by semantic factors. Counterfactual prompts have a greater effect compared to factual ones, suggesting that while contextual entrainment is a mechanistic phenomenon, it is modulated by semantic factors. We hypothesise that there is a circuit of attention heads -- the entrainment heads -- that corresponds to the contextual entrainment phenomenon. Using a novel entrainment head discovery method based on differentiable masking, we identify these heads across various settings. When we ``turn off'' these heads, i.e., set their outputs to zero, the effect of contextual entrainment is significantly attenuated, causing the model to generate output that capitulates to what it would produce if no distracting context were provided. Our discovery of contextual entrainment, along with our investigation into LM distraction via the entrainment heads, marks a key step towards the mechanistic analysis and mitigation of the distraction problem.

cs.CL↗

WGSR-Bench: Wargame-based Game-theoretic Strategic Reasoning Benchmark for Large Language Models

Recent breakthroughs in Large Language Models (LLMs) have led to a qualitative leap in artificial intelligence' s performance on reasoning tasks, particularly demonstrating remarkable capabilities in mathematical, symbolic, and commonsense reasoning. However, as a critical component of advanced human cognition, strategic reasoning, i.e., the ability to assess multi-agent behaviors in dynamic environments, formulate action plans, and adapt strategies, has yet to be systematically evaluated or modeled. To address this gap, this paper introduces WGSR-Bench, the first strategy reasoning benchmark for LLMs using wargame as its evaluation environment. Wargame, a quintessential high-complexity strategic scenario, integrates environmental uncertainty, adversarial dynamics, and non-unique strategic choices, making it an effective testbed for assessing LLMs' capabilities in multi-agent decision-making, intent inference, and counterfactual reasoning. WGSR-Bench designs test samples around three core tasks, i.e., Environmental situation awareness, Opponent risk modeling and Policy generation, which serve as the core S-POE architecture, to systematically assess main abilities of strategic reasoning. Finally, an LLM-based wargame agent is designed to integrate these parts for a comprehensive strategy reasoning assessment. With WGSR-Bench, we hope to assess the strengths and limitations of state-of-the-art LLMs in game-theoretic strategic reasoning and to advance research in large model-driven strategic intelligence.

cs.AI↗