Torkel E. Loman | Searcharxiv

arXiv2026

Learning functional components of PDEs from data using neural networks

Partial differential equation (PDE) models frequently contain unknown functional terms that cannot be measured directly, limiting their predictive utility. While data-driven methods for estimating scalar PDE parameters are well established, the recovery of unknown functions remains comparatively underexplored. Here, we show that standard parameter estimation workflows can be extended to infer functional components of PDEs directly from data. Our approach embeds neural networks within the PDE framework, allowing unknown functions to be learned during training with high accuracy. Using nonlocal aggregation-diffusion equations as a case study, we infer interaction kernels and external potentials from steady-state observations. We systematically examine how reconstruction accuracy depends on factors such as the number and diversity of available solutions, sampling density, and measurement noise. The resulting framework retains the advantages of conventional PDE calibration approaches while extending them to functional inference: once trained, the PDE model can be used in the standard way to analyse system behaviour and generate predictions.

cs.LG↗

arXiv2026

Reliable model selection in the presence of parameter non-identifiability

Mathematical models are invaluable for understanding and predicting how biological systems behave, although their construction requires specifying mechanisms and relationships that are often not perfectly known. In the presence of multiple competing models, model uncertainty should be accounted for when performing inference based on available data. Bayesian model selection is a framework for testing mechanistic hypotheses and generating predictions under model uncertainty, which generally requires computation of the model evidence. In this work, we investigate the reliability of evidence computation methods when parameter non-identifiability -- the inability to distinguish between parameter values given available data -- is present, and find that deterministic evidence approximations can produce misleading model selection results because their underlying assumptions are violated. We propose a novel implementation of adaptive multiple importance sampling for evidence estimation, and demonstrate its robustness against non-identifiability. We use ecological case studies to demonstrate how simple model selection methods fail to produce accurate results, whereas our method yields model selection results that are comparable to those obtained by Markov chain Monte Carlo methods at substantially lower computational cost. Given the pervasiveness of parameter non-identifiability in mathematical biology, this work provides a practical approach to reliable model selection in the presence of poorly identified parameters.

stat.ME↗