arXiv subjects

Tripti Agarwal

Publications and source records attributed to Tripti Agarwal.

8 recordsLinked to original sources

arXiv2026

Fast Topology-Aware Lossy Data Compression with Full Preservation of Critical Points and Local Order

Many scientific codes and instruments generate large amounts of floating-point data at high rates that must be compressed before they can be stored. Typically, only lossy compression algorithms deliver high-enough compression ratios. However, many of them provide only point-wise error bounds and do not preserve topological aspects of the data such as the relative magnitude of neighboring points. Even topology-preserving compressors tend to merely preserve some critical points and are generally slow. Our Local-Order-Preserving Compressor is the first to preserve the full local order (and thus all critical points), runs orders of magnitude faster than prior topology-preserving compressors, yields higher compression ratios than lossless compressors, and produces bit-for-bit the same output on CPUs and GPUs.

cs.DC↗

arXiv2026

Enabling Homomorphic Analytical Operations on Compressed Scientific Data with Multi-stage Decompression

Error-controlled lossy compressors have been widely used in scientific applications to reduce the unprecedented size of scientific data while keeping data distortion within a user-specified threshold. While they significantly mitigate the pressure for data storage and transmission, they prolong the time to access the data because decompression is required to transform the binary compressed data into meaningful floating-point numbers. This incurs noticeable overhead for common analytical operations on scientific data that extract or derive useful information, because the time cost of the operations could be much lower than that of decompression. In this work, we design an error-controlled lossy compression and analytical framework that features multi-stage decompression and homomorphic analytical operation algorithms on intermediate decompressed data for reduced data access latency. Our contributions are threefold. (1) We abstract a generic compression pipeline with partial decompression to multiple intermediate data representations and implement four instances based on state-of-the-art high-throughput scientific data compressors. (2) We carefully design homomorphic algorithms to enable direct operations on intermediate decompressed data for three types of analytical operations on scientific data. (3) We evaluate our approach using five real-world scientific datasets. Experimental evaluations demonstrate that our method achieves significant speedups when performing analytical operations on compressed scientific data across all three targeted analytical operation types.

cs.DB↗

arXiv2026

TopoSZp: Lightweight Topology-Aware Error-controlled Compression for Scientific Data

Error-bounded lossy compression is essential for managing the massive data volumes produced by large-scale HPC simulations. While state-of-the-art compressors such as SZ and ZFP provide strong numerical error guarantees, they often fail to preserve topological structures (example, minima, maxima, and saddle points) that are critical for scientific analysis. Existing topology-aware compressors address this limitation but incur substantial computational overhead. We present TopoSZp, a lightweight, topology-aware, error-controlled lossy compressor that preserves critical points and their relationships while maintaining high compression and decompression performance. Built on the high-throughput SZp compressor, TopoSZp integrates efficient critical point detection, local ordering preservation, and targeted saddle point refinement, all within a relaxed but strictly enforced error bound. Experimental results on real-world scientific datasets show that TopoSZp achieves 3 to 100 times fewer non-preserved critical points, introduces no false positives or incorrect critical point types, and delivers 100 to 10000 times faster compression and 10 to 500 times faster decompression compared to existing topology-aware compressors, while maintaining competitive compression ratios.

cs.DC↗

arXiv2025

Local-Order Auxiliary Losses Can Improve Autoencoder Reconstruction

Mean-squared error is the default objective for training autoencoders, yet compressed reconstructions often depend not only on pointwise accuracy but also on preserving local spatial order. We study whether structural auxiliary losses can improve, rather than trade off against, MSE in finite-capacity autoencoders. We introduce finite-difference sign error (FDSE), a local-order auxiliary objective that penalizes disagreements between the signs of neighboring finite differences in the target and reconstruction. FDSE is simple, architecture-agnostic, and differentiable through smooth sign surrogates. Across four tensor reconstruction tasks, we find that moderate mixtures of MSE and FDSE can substantially reduce validation MSE relative to pure MSE training. In coefficient sweeps, FDSE mixtures reduce validation MSE by 2.3$\times$--7.0$\times$ over pure MSE on these tasks, while comparisons with other auxiliary objectives show FDSE to be among the strongest structural objectives tested. The effect is not universal: pure FDSE performs poorly, and gains are largest for coherent spatial fields where local order carries information about the underlying signal. These results suggest that, in compressed-latent reconstruction, appropriately weighted local-structure supervision can guide optimization toward solutions with better pointwise accuracy, rather than merely improving perceptual or structural metrics at MSE's expense.

cs.LG↗

arXiv2024

HoSZp: An Efficient Homomorphic Error-bounded Lossy Compressor for Scientific Data

Error-bounded lossy compression has been a critical technique to significantly reduce the sheer amounts of simulation datasets for high-performance computing (HPC) scientific applications while effectively controlling the data distortion based on user-specified error bound. In many real-world use cases, users must perform computational operations on the compressed data (a.k.a. homomorphic compression). However, none of the existing error-bounded lossy compressors support the homomorphism, inevitably resulting in undesired decompression costs. In this paper, we propose a novel homomorphic error-bounded lossy compressor (called HoSZp), which supports not only error-bounding features but efficient computations (including negation, addition, multiplication, mean, variance, etc.) on the compressed data without the complete decompression step, which is the first attempt to the best of our knowledge. We develop several optimization strategies to maximize the overall compression ratio and execution performance. We evaluate HoSZp compared to other state-of-the-art lossy compressors based on multiple real-world scientific application datasets.

cs.DC↗

arXiv2024

What Operations can be Performed Directly on Compressed Arrays, and with What Error?

In response to the rapidly escalating costs of computing with large matrices and tensors caused by data movement, several lossy compression methods have been developed to significantly reduce data volumes. Unfortunately, all these methods require the data to be decompressed before further computations are done. In this work, we develop a lossy compressor that allows a dozen fairly fundamental operations directly on compressed data while offering good compression ratios and modest errors. We implement a new compressor PyBlaz based on the familiar GPU-powered PyTorch framework, and evaluate it on three non-trivial applications, choosing different number systems for internal representation. Our results demonstrate that the compressed-domain operations achieve good scalability with problem sizes while incurring errors well within acceptable limits. To our best knowledge, this is the first such lossy compressor that supports compressed-domain operations while achieving acceptable performance as well as error.

cs.DC↗

arXiv2020

A Topological Similarity Measure between Multi-Field Data using Multi-Resolution Reeb Spaces

Searching topological similarity between a pair of shapes or data is an important problem in data analysis and visualization. The problem of computing similarity measures using scalar topology has been studied extensively and proven useful in shape and data matching. Even though multi-field (or multivariate) topology-based techniques reveal richer topological features, research on computing similarity measures using multi-field topology is still in its infancy. In the current paper, we propose a novel similarity measure between two piecewise-linear multi-fields based on their multi-resolution Reeb spaces - a newly developed data-structure that captures the topology of a multi-field. Overall, our method consists of two steps: (i) building a multi-resolution Reeb space corresponding to each of the multi-fields and (ii) proposing a similarity measure for a list of matching pairs (of nodes), obtained by comparing the multi-resolution Reeb spaces. We demonstrate an application of the proposed similarity measure by detecting the nuclear scission point in a time-varying multi-field data from computational physics.

cs.CG↗

arXiv2019

Topological Feature Search in Time-Varying Multifield Data

A wide range of data that appear in scientific experiments and simulations are multivariate or multifield in nature, consisting of multiple scalar fields. Topological feature search of such data aims to reveal important properties useful to the domain scientists. It has been shown in recent works that a single scalar field is insufficient to capture many important topological features in the data, instead one needs to consider topological relationships between multiple scalar fields. In the current paper, we propose a novel method of finding similarity between two multifield data by comparing their respective fiber component distributions. Given a time-varying multifield data, the method computes a metric plot for each pair of histograms at consecutive time stamps to understand the topological changes in the data over time. We validate the method using real and synthetic data. The effectiveness of the proposed method is shown by its ability to capture important topological features that are not always possible to detect using the individual component scalar fields.

cs.CG↗