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Tuan Minh Do

Publications and source records attributed to Tuan Minh Do.

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From sparse quantum-computing data to atomistic simulation with universal machine-learning interatomic potentials

We propose a framework for incorporating quantum-computing-based electronic-structure calculations into universal machine-learning interatomic potentials (uMLIPs). Rather than constructing an interatomic potential from scratch, we refine a pretrained DFT-based uMLIP using a small set of accurate reference energies obtained from quantum computing. We demonstrate the approach for three chemically distinct applications: the Menshutkin reaction, water adsorption in the metal-organic framework HKUST-1, and CO hopping on a high-entropy-alloy nanoparticle. For the Menshutkin reaction, fine-tuning on gas-phase configurations improves the transition-state energy inside a carbon nanotube but not the product energy. For water adsorption in HKUST-1, fine-tuning with only 14 reference configurations brings adsorption thermodynamics obtained from millions of configurations sampled by Widom insertion into closer agreement with reference values. For CO hopping on an IrPdPtRhRu nanoparticle, the preference for on-top over bridge adsorption is recovered in the finite-temperature free-energy profile obtained from enhanced-sampling molecular dynamics, even though the reference data contain only energies. These results demonstrate that the proposed framework provides a practical route for incorporating quantum-computing calculations into realistic atomistic simulations and that quantum-computing reference data can improve pretrained uMLIPs.

physics.chem-ph

Quantum computing for accurate large-scale electronic-structure calculations: DFT-embedded, post-processed quantum-selected configuration interaction

We present a multilevel embedding framework for quantum chemistry calculations on a quantum computer. In our framework, a quantum algorithm treats the strongly correlated active space, while a high-level wave-function method such as coupled cluster theory or multireference perturbation theory recovers the remaining correlation in the surrounding region. A sampling-based quantum algorithm, quantum-selected configuration interaction, bridges the quantum and classical treatments. The entire calculation is embedded in a low-cost density functional theory description of the surrounding environment using Manby's projection technique. We apply the framework to organic, metal-organic, and metallic systems, computing bond dissociation energies, adsorption energies, and reaction barriers using only the subset of qubits of a 144-qubit superconducting quantum computer at the University of Osaka and achieving $\sim$1 kcal/mol agreement with classical references for a Menshutkin $\mathrm{S_N2}$ reaction inside a carbon nanotube. Our results may open the way to quantitatively reliable quantum-classical hybrid calculations for large-scale chemical systems.

physics.chem-ph

Taming Multi-Domain, -Fidelity Data: Towards Foundation Models for Atomistic Scale Simulations

Machine learning interatomic potentials (MLIPs) are changing atomistic simulations in the field of chemistry and materials science. However, constructing a single universal MLIP that can accurately model molecular and crystalline systems remains challenging. A central obstacle is the integration of diverse datasets generated under different computational conditions. We present Total Energy Alignment (TEA), which is an approach that enables the seamless integration of heterogeneous quantum chemical datasets without redundant calculations. Using TEA, we trained MACE-Osaka24, the first open-source MLIP model based on a unified dataset covering molecular and crystalline systems. This universal model displays strong performances across diverse chemical systems, exhibiting similar or improved accuracies in predicting organic reaction barriers compared to those of specialized models, while effectively maintaining state-of-the-art accuracies for inorganic systems. These advancements pave the way for accelerated discoveries in the fields of chemistry and materials science via genuine foundation models for chemistry.

physics.chem-ph

Optimizing adsorption configurations on alloy surfaces using Tensor Train Optimizer

Understanding how molecules arrange on surfaces is fundamental to surface chemistry and essential for the rational design of catalytic and functional materials. In particular, the energetically most stable configuration provides valuable insight into adsorption-related processes. However, the search for this configuration is a global optimization problem with exponentially growing complexity as the number of adsorbates and possible adsorption sites increases. To address this, we express the adsorption energy as a sum of multi-adsorbate interaction terms, evaluated using our in-house trained machine learning interatomic potential MACE-Osaka24, and formulate the search for the most stable configuration as a higher-order unconstrained binary optimization (HUBO) problem. We employ a tensor-train-based method, Tensor Train Optimizer (TTOpt), to solve the HUBO problem and identify optimal adsorption configurations of CO and NO molecules on various alloys up to full surface coverage. Our results show that including interaction terms up to third order may be sufficient to approximate adsorption energies within chemical accuracy and to identify optimal configurations. We also observed that TTOpt performs better with the HUBO formulation, suggesting that third-order terms help preserve correlations between adsorption sites, which allow TTOpt to optimize configurations more effectively. The extensive benchmarks across various alloys, surface geometries, and adsorbates demonstrate the robustness and applicability of using TTOpt to solve HUBO-type global optimization problems in surface chemistry. In contrast to quantum and digital annealers, which have recently been applied to similar global optimization tasks but are restricted to cost functions with at most quadratic terms, our approach can incorporate higher-order terms in a straightforward manner and does not require specialized hardware.

physics.chem-ph