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Tyler A. Engstrom

Publications and source records attributed to Tyler A. Engstrom.

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A bilayer cellular Potts model of epithelial docking

Fusion of two epithelial cell sheets brought together in a bilayer configuration is a common step in animal morphogenesis, yet, in contrast to other epithelial fusion processes such as wound healing in a monolayer of cells, it has not been a strong focus of modeling efforts. Here we consider a preliminary stage of bilayer fusion, recently termed "docking." In multiple instances of docking that span apical and basal varieties, cells appear to have a tendency to remodel so as to co-localize their bilateral junctions (match their edges) across the bilayer. Motivated by this observation, we introduce a bilayer cellular Potts model that couples two standard 2D area- and perimeter-elasticity models via short-range, out-of-plane interactions between cell edges. The new coupling involves a single adjustable parameter that minimally models the combined effect of dynamic cytoskeletal protrusions, cadherins, and other potential edge-associated adhesion molecules. Our model predicts that bilayer edge matching is maximized when the two monolayers are in their fluid-like regimes (average cell shape index greater than 4.6 in our implementation), and when the bilayer coupling strength strikes a balance between in-plane and out-of-plane energy scales. At higher coupling strengths, the system tends to get stuck in metastable states with sub-optimal edge matching. Exploration of the mechanisms of edge matching reveals that pairs and quadruplets of coordinated T1 transitions play a particularly important role. We also find numerous examples of emergent features we term "domain walls" - branching or unbranching curves that cross no matched edges, but that separate regions of nearly complete matching. These domain walls can be both system spanning and long lived. Finally, we extend our model to crudely account for bending of the two sheets, and study the distributions of docking front speeds that result.

physics.bio-ph

Conservative yet constitutively odd elasticity in prestressed metamaterials

We introduce a design principle for mechanical metamaterials based on "odd elasticity, once removed." By revisiting classic results relating the variation of Cauchy stress and Lagrangian strain around a prestressed reference state, we show how anisotropic, equilibrium prestress can generate a major anti-symmetry in the material's constitutive response. Tuning the system to such a state drives it to a critical instability, radically transforming its acoustic properties. We then inverse-design several uniform 2D solids that act as unique waveguides supporting decoupled modes along special lattice directions: a string-like mode and an exotic, in-plane soft mode with a flexural character ($\omega \sim q^2$). The soft modes are insensitive to the value of the anisotropic prestress and exhibit oscillating momentum density but support a non-oscillatory, constant energy current. This principle of harnessing conservative "oddness" to unlock instability-driven wave phenomena provides a powerful new route to creating tunable materials for filtering, guiding, and controlling mechanical waves.

cond-mat.soft

Microphysics of Neutron Star Outer Envelopes in the Periodized, Magnetic Thomas-Fermi Model

Static and dynamic properties of low density outer envelopes of neutron stars are calculated within the nonlinear magnetic Thomas-Fermi model, assuming degenerate electrons. A novel domain decomposition enables proper description of lattice symmetry and may be seen as a prototype for the general class of problems involving nonlinear charge screening of periodic, quasi-low-dimensionality structures, e.g. liquid crystals. We describe a scalable implementation of the method using Hypre. Phase velocity of long wavelength transverse phonons is found to be a factor of 5-7 larger than in the corresponding Coulomb crystal model, which could have implications for low temperature phonon-mediated thermal conductivity. Other findings include $c'<0$ elastic instabilities for both bcc and fcc lattices, reminiscent of the situation in some light actinides, and suggestive of a symmetry-lowering transition to a tetragonal or orthorhombic lattice.

astro-ph.SR