arXiv subjects

Ulises Cortés

Publications and source records attributed to Ulises Cortés.

At least 19 recordsLinked to original sources

arXiv2025

Design and Validation of a Responsible Artificial Intelligence-based System for the Referral of Diabetic Retinopathy Patients

Diabetic Retinopathy (DR) is a leading cause of vision loss in working-age individuals. Early detection of DR can reduce the risk of vision loss by up to 95%, but a shortage of retinologists and challenges in timely examination complicate detection. Artificial Intelligence (AI) models using retinal fundus photographs (RFPs) offer a promising solution. However, adoption in clinical settings is hindered by low-quality data and biases that may lead AI systems to learn unintended features. To address these challenges, we developed RAIS-DR, a Responsible AI System for DR screening that incorporates ethical principles across the AI lifecycle. RAIS-DR integrates efficient convolutional models for preprocessing, quality assessment, and three specialized DR classification models. We evaluated RAIS-DR against the FDA-approved EyeArt system on a local dataset of 1,046 patients, unseen by both systems. RAIS-DR demonstrated significant improvements, with F1 scores increasing by 5-12%, accuracy by 6-19%, and specificity by 10-20%. Additionally, fairness metrics such as Disparate Impact and Equal Opportunity Difference indicated equitable performance across demographic subgroups, underscoring RAIS-DR's potential to reduce healthcare disparities. These results highlight RAIS-DR as a robust and ethically aligned solution for DR screening in clinical settings. The code, weights of RAIS-DR are available at https://gitlab.com/inteligencia-gubernamental-jalisco/jalisco-retinopathy with RAIL.

cs.CV↗

arXiv2025

The Aloe Family Recipe for Open and Specialized Healthcare LLMs

Purpose: With advancements in Large Language Models (LLMs) for healthcare, the need arises for competitive open-source models to protect the public interest. This work contributes to the field of open medical LLMs by optimizing key stages of data preprocessing and training, while showing how to improve model safety (through DPO) and efficacy (through RAG). The evaluation methodology used, which includes four different types of tests, defines a new standard for the field. The resultant models, shown to be competitive with the best private alternatives, are released with a permisive license. Methods: Building on top of strong base models like Llama 3.1 and Qwen 2.5, Aloe Beta uses a custom dataset to enhance public data with synthetic Chain of Thought examples. The models undergo alignment with Direct Preference Optimization, emphasizing ethical and policy-aligned performance in the presence of jailbreaking attacks. Evaluation includes close-ended, open-ended, safety and human assessments, to maximize the reliability of results. Results: Recommendations are made across the entire pipeline, backed by the solid performance of the Aloe Family. These models deliver competitive performance across healthcare benchmarks and medical fields, and are often preferred by healthcare professionals. On bias and toxicity, the Aloe Beta models significantly improve safety, showing resilience to unseen jailbreaking attacks. For a responsible release, a detailed risk assessment specific to healthcare is attached to the Aloe Family models. Conclusion: The Aloe Beta models, and the recipe that leads to them, are a significant contribution to the open-source medical LLM field, offering top-of-the-line performance while maintaining high ethical requirements. This work sets a new standard for developing and reporting aligned LLMs in healthcare.

cs.CL↗

arXiv2025

Explaining Autonomous Vehicles with Intention-aware Policy Graphs

The potential to improve road safety, reduce human driving error, and promote environmental sustainability have enabled the field of autonomous driving to progress rapidly over recent decades. The performance of autonomous vehicles has significantly improved thanks to advancements in Artificial Intelligence, particularly Deep Learning. Nevertheless, the opacity of their decision-making, rooted in the use of accurate yet complex AI models, has created barriers to their societal trust and regulatory acceptance, raising the need for explainability. We propose a post-hoc, model-agnostic solution to provide teleological explanations for the behaviour of an autonomous vehicle in urban environments. Building on Intention-aware Policy Graphs, our approach enables the extraction of interpretable and reliable explanations of vehicle behaviour in the nuScenes dataset from global and local perspectives. We demonstrate the potential of these explanations to assess whether the vehicle operates within acceptable legal boundaries and to identify possible vulnerabilities in autonomous driving datasets and models.

cs.AI↗

arXiv2024

Intention-aware policy graphs: answering what, how, and why in opaque agents

Agents are a special kind of AI-based software in that they interact in complex environments and have increased potential for emergent behaviour. Explaining such emergent behaviour is key to deploying trustworthy AI, but the increasing complexity and opaque nature of many agent implementations makes this hard. In this work, we propose a Probabilistic Graphical Model along with a pipeline for designing such model -- by which the behaviour of an agent can be deliberated about -- and for computing a robust numerical value for the intentions the agent has at any moment. We contribute measurements that evaluate the interpretability and reliability of explanations provided, and enables explainability questions such as `what do you want to do now?' (e.g. deliver soup) `how do you plan to do it?' (e.g. returning a plan that considers its skills and the world), and `why would you take this action at this state?' (e.g. explaining how that furthers or hinders its own goals). This model can be constructed by taking partial observations of the agent's actions and world states, and we provide an iterative workflow for increasing the proposed measurements through better design and/or pointing out irrational agent behaviour.

cs.AI↗

arXiv2023

A few misfits can Change the World

Rising inequality is a critical concern for societies worldwide, to the extent that emerging high-growth economies such as China have identified common prosperity as a central goal. However, the mechanisms by which digital disruptions contribute to inequality and the efficacy of existing remedies such as taxation, must be better understood. This is particularly true for the implications of the complex process of technological adoption that requires extensive social validation beyond weak ties and, how to trigger it in the hyperconnected world of the 21st century. This study aims to shed light on the implications of market evolutionary mechanism from the lenses of technological adoption as a social process. Our findings underscore the pivotal importance of connectivity in this process while also revealing the limited effectiveness of taxation as a counterbalance for inequality. Our research reveals that widespread cultural change is not a prerequisite for technological disruption. The injection of a small cohort of entrepreneurs - a few misfits - can expedite technology adoption even in conservative, moderately connected societies and, change the world.

cs.SI↗

arXiv2022

The use of Synthetic Data to solve the scalability and data availability problems in Smart City Digital Twins

The A.I. disruption and the need to compete on innovation are impacting cities that have an increasing necessity to become innovation hotspots. However, without proven solutions, experimentation, often unsuccessful, is needed. But experimentation in cities has many undesirable effects not only for its citizens but also reputational if unsuccessful. Digital Twins, so popular in other areas, seem like a promising way to expand experimentation proposals but in simulated environments, translating only the half-baked ones, the ones with higher probability of success, to real environments and therefore minimizing risks. However, Digital Twins are data intensive and need highly localized data, making them difficult to scale, particularly to small cities, and with the high cost associated to data collection. We present an alternative based on synthetic data that given some conditions, quite common in Smart Cities, can solve these two problems together with a proof-of-concept based on NO2 pollution.

cs.AI↗

arXiv2022

Signs for Ethical AI: A Route Towards Transparency

Today, Artificial Intelligence (AI) has a direct impact on the daily life of billions of people. Being applied to sectors like finance, health, security and advertisement, AI fuels some of the biggest companies and research institutions in the world. Its impact in the near future seems difficult to predict or bound. In contrast to all this power, society remains mostly ignorant of the capabilities and standard practices of AI today. To address this imbalance, improving current interactions between people and AI systems, we propose a transparency scheme to be implemented on any AI system open to the public. The scheme is based on two pillars: Data Privacy and AI Transparency. The first recognizes the relevance of data for AI, and is supported by GDPR. The second considers aspects of AI transparency currently unregulated: AI capabilities, purpose and source. We design this pillar based on ethical principles. For each of the two pillars, we define a three-level display. The first level is based on visual signs, inspired by traffic signs managing the interaction between people and cars, and designed for quick and universal interpretability. The second level uses factsheets, providing limited details. The last level provides access to all available information. After detailing and exemplifying the proposed transparency scheme, we define a set of principles for creating transparent by design software, to be used during the integration of AI components on user-oriented services.

cs.CY↗

arXiv2021

A trainable monogenic ConvNet layer robust in front of large contrast changes in image classification

Convolutional Neural Networks (ConvNets) at present achieve remarkable performance in image classification tasks. However, current ConvNets cannot guarantee the capabilities of the mammalian visual systems such as invariance to contrast and illumination changes. Some ideas to overcome the illumination and contrast variations usually have to be tuned manually and tend to fail when tested with other types of data degradation. In this context, we present a new bio-inspired {entry} layer, M6, which detects low-level geometric features (lines, edges, and orientations) which are similar to patterns detected by the V1 visual cortex. This new trainable layer is capable of coping with image classification even with large contrast variations. The explanation for this behavior is the monogenic signal geometry, which represents each pixel value in a 3D space using quaternions, a fact that confers a degree of explainability to the networks. We compare M6 with a conventional convolutional layer (C) and a deterministic quaternion local phase layer (Q9). The experimental setup {is designed to evaluate the robustness} of our M6 enriched ConvNet model and includes three architectures, four datasets, three types of contrast degradation (including non-uniform haze degradations). The numerical results reveal that the models with M6 are the most robust in front of any kind of contrast variations. This amounts to a significant enhancement of the C models, which usually have reasonably good performance only when the same training and test degradation are used, except for the case of maximum degradation. Moreover, the Structural Similarity Index Measure (SSIM) is used to analyze and explain the robustness effect of the M6 feature maps under any kind of contrast degradations.

cs.CV↗

arXiv2019

Random Forest as a Tumour Genetic Marker Extractor

Finding tumour genetic markers is essential to biomedicine due to their relevance for cancer detection and therapy development. In this paper, we explore a recently released dataset of chromosome rearrangements in 2,586 cancer patients, where different sorts of alterations have been detected. Using a Random Forest classifier, we evaluate the relevance of several features (some directly available in the original data, some engineered by us) related to chromosome rearrangements. This evaluation results in a set of potential tumour genetic markers, some of which are validated in the bibliography, while others are potentially novel.

q-bio.GN↗

arXiv2019

Towards a Goal-oriented Agent-based Simulation framework for High-Performance Computing

Currently, agent-based simulation frameworks force the user to choose between simulations involving a large number of agents (at the expense of limited agent reasoning capability) or simulations including agents with increased reasoning capabilities (at the expense of a limited number of agents per simulation). This paper describes a first attempt at putting goal-oriented agents into large agent-based (micro-)simulations. We discuss a model for goal-oriented agents in High-Performance Computing (HPC) and then briefly discuss its implementation in PyCOMPSs (a library that eases the parallelisation of tasks) to build such a platform that benefits from a large number of agents with the capacity to execute complex cognitive agents.

cs.MA↗

arXiv2018

A Visual Distance for WordNet

Measuring the distance between concepts is an important field of study of Natural Language Processing, as it can be used to improve tasks related to the interpretation of those same concepts. WordNet, which includes a wide variety of concepts associated with words (i.e., synsets), is often used as a source for computing those distances. In this paper, we explore a distance for WordNet synsets based on visual features, instead of lexical ones. For this purpose, we extract the graphic features generated within a deep convolutional neural networks trained with ImageNet and use those features to generate a representative of each synset. Based on those representatives, we define a distance measure of synsets, which complements the traditional lexical distances. Finally, we propose some experiments to evaluate its performance and compare it with the current state-of-the-art.

cs.CL↗

arXiv2018

On the Behavior of Convolutional Nets for Feature Extraction

Deep neural networks are representation learning techniques. During training, a deep net is capable of generating a descriptive language of unprecedented size and detail in machine learning. Extracting the descriptive language coded within a trained CNN model (in the case of image data), and reusing it for other purposes is a field of interest, as it provides access to the visual descriptors previously learnt by the CNN after processing millions of images, without requiring an expensive training phase. Contributions to this field (commonly known as feature representation transfer or transfer learning) have been purely empirical so far, extracting all CNN features from a single layer close to the output and testing their performance by feeding them to a classifier. This approach has provided consistent results, although its relevance is limited to classification tasks. In a completely different approach, in this paper we statistically measure the discriminative power of every single feature found within a deep CNN, when used for characterizing every class of 11 datasets. We seek to provide new insights into the behavior of CNN features, particularly the ones from convolutional layers, as this can be relevant for their application to knowledge representation and reasoning. Our results confirm that low and middle level features may behave differently to high level features, but only under certain conditions. We find that all CNN features can be used for knowledge representation purposes both by their presence or by their absence, doubling the information a single CNN feature may provide. We also study how much noise these features may include, and propose a thresholding approach to discard most of it. All these insights have a direct application to the generation of CNN embedding spaces.

cs.NE↗

arXiv2017

Fluid Communities: A Competitive, Scalable and Diverse Community Detection Algorithm

We introduce a community detection algorithm (Fluid Communities) based on the idea of fluids interacting in an environment, expanding and contracting as a result of that interaction. Fluid Communities is based on the propagation methodology, which represents the state-of-the-art in terms of computational cost and scalability. While being highly efficient, Fluid Communities is able to find communities in synthetic graphs with an accuracy close to the current best alternatives. Additionally, Fluid Communities is the first propagation-based algorithm capable of identifying a variable number of communities in network. To illustrate the relevance of the algorithm, we evaluate the diversity of the communities found by Fluid Communities, and find them to be significantly different from the ones found by alternative methods.

cs.DS↗

arXiv2017

Building Graph Representations of Deep Vector Embeddings

Patterns stored within pre-trained deep neural networks compose large and powerful descriptive languages that can be used for many different purposes. Typically, deep network representations are implemented within vector embedding spaces, which enables the use of traditional machine learning algorithms on top of them. In this short paper we propose the construction of a graph embedding space instead, introducing a methodology to transform the knowledge coded within a deep convolutional network into a topological space (i.e. a network). We outline how such graph can hold data instances, data features, relations between instances and features, and relations among features. Finally, we introduce some preliminary experiments to illustrate how the resultant graph embedding space can be exploited through graph analytics algorithms.

cs.NE↗

arXiv2017

Full-Network Embedding in a Multimodal Embedding Pipeline

The current state-of-the-art for image annotation and image retrieval tasks is obtained through deep neural networks, which combine an image representation and a text representation into a shared embedding space. In this paper we evaluate the impact of using the Full-Network embedding in this setting, replacing the original image representation in a competitive multimodal embedding generation scheme. Unlike the one-layer image embeddings typically used by most approaches, the Full-Network embedding provides a multi-scale representation of images, which results in richer characterizations. To measure the influence of the Full-Network embedding, we evaluate its performance on three different datasets, and compare the results with the original multimodal embedding generation scheme when using a one-layer image embedding, and with the rest of the state-of-the-art. Results for image annotation and image retrieval tasks indicate that the Full-Network embedding is consistently superior to the one-layer embedding. These results motivate the integration of the Full-Network embedding on any multimodal embedding generation scheme, something feasible thanks to the flexibility of the approach.

cs.CV↗

arXiv2017

An Out-of-the-box Full-network Embedding for Convolutional Neural Networks

Transfer learning for feature extraction can be used to exploit deep representations in contexts where there is very few training data, where there are limited computational resources, or when tuning the hyper-parameters needed for training is not an option. While previous contributions to feature extraction propose embeddings based on a single layer of the network, in this paper we propose a full-network embedding which successfully integrates convolutional and fully connected features, coming from all layers of a deep convolutional neural network. To do so, the embedding normalizes features in the context of the problem, and discretizes their values to reduce noise and regularize the embedding space. Significantly, this also reduces the computational cost of processing the resultant representations. The proposed method is shown to outperform single layer embeddings on several image classification tasks, while also being more robust to the choice of the pre-trained model used for obtaining the initial features. The performance gap in classification accuracy between thoroughly tuned solutions and the full-network embedding is also reduced, which makes of the proposed approach a competitive solution for a large set of applications.

cs.LG↗

arXiv2016

Hierarchical Hyperlink Prediction for the WWW

The hyperlink prediction task, that of proposing new links between webpages, can be used to improve search engines, expand the visibility of web pages, and increase the connectivity and navigability of the web. Hyperlink prediction is typically performed on webgraphs composed by thousands or millions of vertices, where on average each webpage contains less than fifty links. Algorithms processing graphs so large and sparse require to be both scalable and precise, a challenging combination. Similarity-based algorithms are among the most scalable solutions within the link prediction field, due to their parallel nature and computational simplicity. These algorithms independently explore the nearby topological features of every missing link from the graph in order to determine its likelihood. Unfortunately, the precision of similarity-based algorithms is limited, which has prevented their broad application so far. In this work we explore the performance of similarity-based algorithms for the particular problem of hyperlink prediction on large webgraphs, and propose a novel method which assumes the existence of hierarchical properties. We evaluate this new approach on several webgraphs and compare its performance with that of the current best similarity-based algorithms. Its remarkable performance leads us to argue on the applicability of the proposal, identifying several use cases of hyperlink prediction. We also describes the approach we took for the computation of large-scale graphs from the perspective of high-performance computing, providing details on the implementation and parallelization of code.

cs.DS↗

arXiv2016

Limitations and Alternatives for the Evaluation of Large-scale Link Prediction

Link prediction, the problem of identifying missing links among a set of inter-related data entities, is a popular field of research due to its application to graph-like domains. Producing consistent evaluations of the performance of the many link prediction algorithms being proposed can be challenging due to variable graph properties, such as size and density. In this paper we first discuss traditional data mining solutions which are applicable to link prediction evaluation, arguing about their capacity for producing faithful and useful evaluations. We also introduce an innovative modification to a traditional evaluation methodology with the goal of adapting it to the problem of evaluating link prediction algorithms when applied to large graphs, by tackling the problem of class imbalance. We empirically evaluate the proposed methodology and, building on these findings, make a case for its importance on the evaluation of large-scale graph processing.

cs.SI↗