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Vajira Thambawita

Publications and source records attributed to Vajira Thambawita.

At least 19 recordsLinked to original sources

Medical Imaging AI Competitions Lack Fairness

Benchmarking competitions are central to the development of artificial intelligence (AI) in medical imaging, defining performance standards and shaping methodological progress. However, it remains unclear whether these benchmarks provide data that are sufficiently representative, accessible, and reusable to support clinically meaningful AI. In this work, we assess fairness along two complementary dimensions: (1) whether challenge datasets capture the diversity of real-world clinical data, and (2) whether they are accessible and legally reusable in line with the FAIR principles. To address this question, we conducted a large-scale systematic study of 249 biomedical image analysis challenges comprising 458 tasks across 19 imaging modalities. Our findings reveal limited representation across challenge datasets with respect to geographic location, imaging modalities, and problem types, raising concerns about how well current benchmarks reflect real-world clinical diversity. Despite their widespread influence, challenge datasets were frequently constrained by restrictive or ambiguous access conditions, inconsistent or non-compliant licensing practices, and incomplete documentation, limiting reproducibility and long-term reuse. Together, these shortcomings expose foundational fairness limitations in our benchmarking ecosystem and highlight a disconnect between leaderboard success and clinical relevance.

cs.CV↗

Beyond the Leaderboard: Design Lessons for Trustworthy Multimodal VQA

Healthcare multimodal AI must combine visual and textual evidence while remaining reliable and interpretable. Using MediaEval Medico 2025 as a retrospective GI endoscopy case study, we analyze design choices across nine documented systems for question answering and explanation quality. Parameter-efficient adaptation of pretrained backbones provides strong challenge performance, but answer-level gains do not consistently translate into faithful and complete clinical reasoning. Methods enforcing structured reasoning and explicit grounding show more reliable behavior across heterogeneous question types, although the evidence is correlational rather than ablation-based. These results motivate evaluation beyond lexical overlap, standardized evidence-linked explanations, leakage-aware data governance, and lightweight robustness and calibration checks. The findings support trustworthy multimodal healthcare AI based on data fusion, explainability, and resilient evaluation.

cs.CL↗

Improved Predictive Performance and Interpretability for Mesomorphic Neural Networks Using Local Fidelity Regularization

Interpretable Mesomorphic Neural Networks (IMNs) offer a promising framework that combines the predictive power of deep neural networks with the interpretability of linear models. However, the original formulation lacks safeguards to ensure that the learned interpretations are in fact reliable. In particular, the network is free to concentrate all explanatory variance into a single weight of the linear output layer, achieving strong predictive performance while producing interpretations that are largely meaningless. Paradoxically, the L1 penalty proposed to encourage sparse solutions exacerbates this problem by further incentivizing such degenerate configurations. To address this vulnerability, we introduce Local Fidelity Regularization (LFR), a novel penalty term that prevents degenerate weight collapse by aligning the linear output weights with local data variations. This structural constraint guarantees faithful explanations and substantially improves the reliability of model interpretations. Furthermore, empirical evaluations across the OpenML benchmark suite demonstrate that LFR does not compromise accuracy for explainability; rather, it achieved improved AUROC over the unregularized IMN. By yielding results highly competitive with state-of-the-art black-box models, LFR provides the dual benefit of reliable interpretability and superior predictive performance. Source code and usage instructions are available at https://github.com/hugohammer/LFR-IMN.git.

cs.LG↗

Ask Before You Diagnose: Safe-Psych, a Sequential Evaluation Benchmark for LLMs in Psychiatry

Large language models (LLMs) are increasingly used for decision support in healthcare, but clinical evidence is often incomplete or evolving. When the available information is insufficient to support a reliable answer, models should request clarification or abstain rather than provide unsupported responses. Existing medical benchmarks, however, typically assume that complete information is available upfront. We introduce Safe-Psych, a sequential benchmark for evaluating how LLMs handle evolving diagnostic uncertainty in clinical psychiatry. Safe-Psych contains over 1,000 real-world psychiatric clinical notes segmented to simulate incremental evidence disclosure, with psychiatrist-derived action labels at each stage: DIAGNOSE, CLARIFY, or ABSTAIN. We evaluate multiple state-of-the-art LLMs in full-information and sequential settings. Our findings show that capability does not ensure calibration: even strong models struggle under incomplete clinical information, with under-abstention exceeding 60% for most models and safety-aware prompting reducing premature commitment only by shifting errors toward excessive abstention. In sequential evaluation, models frequently diagnose before sufficient evidence is available and rarely seek clarification unless explicitly prompted; these premature diagnoses are less accurate than on-time diagnoses. Overall, Safe-Psych reveals a limitation across the evaluated models: recognizing when clinical evidence is incomplete and additional information is needed. We release Safe-Psych to support research on improving LLM safety in healthcare.

cs.CL↗

Sampling Matters: The Effect of ECG Frequency on Deep Learning-Based Atrial Fibrillation Detection

Deep learning models for atrial fibrillation (AF) detection are increasingly trained on heterogeneous electrocardiogram (ECG) datasets with varying sampling frequencies, yet the specific consequences of these discrepancies on model performance, calibration, and robustness remain insufficiently characterized. To address this, we conducted a systematic benchmark using 12-lead, 10-second recordings from the PTB-XL dataset, resampled to target frequencies of 62, 100, 250, and 500 Hz, to evaluate a standard 1-D Convolutional Neural Network (CNN) and a hybrid CNN-Long Short-Term Memory (LSTM) architecture under a rigorous patient-safe cross-validation framework. Our analysis reveals that sampling frequency significantly impacts detection metrics in an architecture-dependent manner; the hybrid CNN-LSTM model demonstrated optimal performance and consistent calibration at intermediate frequencies (100-250 Hz), whereas the 1-D CNN baseline exhibited marked degradation in accuracy and sensitivity at 500 Hz, suggesting increased susceptibility to high-frequency noise. We conclude that ECG sampling frequency is a critical, underappreciated factor in arrhythmia detection, and future foundation models must explicitly control for temporal resolution to ensure clinical reliability and reproducibility.

eess.SP↗

Knowledge-Guided Retrieval-Augmented Generation for Zero-Shot Psychiatric Data: Privacy Preserving Synthetic Data Generation

AI systems in healthcare research have shown potential to increase patient throughput and assist clinicians, yet progress is constrained by limited access to real patient data. To address this issue, we present a zero-shot, knowledge-guided framework for psychiatric tabular data in which large language models (LLMs) are steered via Retrieval-Augmented Generation using the Diagnostic and Statistical Manual of Mental Disorders (DSM-5) and the International Classification of Diseases (ICD-10). We conducted experiments using different combinations of knowledge bases to generate privacy-preserving synthetic data. The resulting models were benchmarked against two state-of-the-art deep learning models for synthetic tabular data generation, namely CTGAN and TVAE, both of which rely on real data and therefore entail potential privacy risks. Evaluation was performed on six anxiety-related disorders: specific phobia, social anxiety disorder, agoraphobia, generalized anxiety disorder, separation anxiety disorder, and panic disorder. CTGAN typically achieves the best marginals and multivariate structure, while the knowledge-augmented LLM is competitive on pairwise structure and attains the lowest pairwise error in separation anxiety and social anxiety. An ablation study shows that clinical retrieval reliably improves univariate and pairwise fidelity over a no-retrieval LLM. Privacy analyses indicate that the real data-free LLM yields modest overlaps and a low average linkage risk comparable to CTGAN, whereas TVAE exhibits extensive duplication despite a low k-map score. Overall, grounding an LLM in clinical knowledge enables high-quality, privacy-preserving synthetic psychiatric data when real datasets are unavailable or cannot be shared.

cs.LG↗

Synthetic Cardiac MRI Image Generation using Deep Generative Models

Synthetic cardiac MRI (CMRI) generation has emerged as a promising strategy to overcome the scarcity of annotated medical imaging data. Recent advances in GANs, VAEs, diffusion probabilistic models, and flow-matching techniques aim to generate anatomically accurate images while addressing challenges such as limited labeled datasets, vendor variability, and risks of privacy leakage through model memorization. Maskconditioned generation improves structural fidelity by guiding synthesis with segmentation maps, while diffusion and flowmatching models offer strong boundary preservation and efficient deterministic transformations. Cross-domain generalization is further supported through vendor-style conditioning and preprocessing steps like intensity normalization. To ensure privacy, studies increasingly incorporate membership inference attacks, nearest-neighbor analyses, and differential privacy mechanisms. Utility evaluations commonly measure downstream segmentation performance, with evidence showing that anatomically constrained synthetic data can enhance accuracy and robustness across multi-vendor settings. This review aims to compare existing CMRI generation approaches through the lenses of fidelity, utility, and privacy, highlighting current limitations and the need for integrated, evaluation-driven frameworks for reliable clinical workflows.

cs.CV↗

Balancing Fidelity, Utility, and Privacy in Synthetic Cardiac MRI Generation: A Comparative Study

Deep learning in cardiac MRI (CMR) is fundamentally constrained by both data scarcity and privacy regulations. This study systematically benchmarks three generative architectures: Denoising Diffusion Probabilistic Models (DDPM), Latent Diffusion Models (LDM), and Flow Matching (FM) for synthetic CMR generation. Utilizing a two-stage pipeline where anatomical masks condition image synthesis, we evaluate generated data across three critical axes: fidelity, utility, and privacy. Our results show that diffusion-based models, particularly DDPM, provide the most effective balance between downstream segmentation utility, image fidelity, and privacy preservation under limited-data conditions, while FM demonstrates promising privacy characteristics with slightly lower task-level performance. These findings quantify the trade-offs between cross-domain generalization and patient confidentiality, establishing a framework for safe and effective synthetic data augmentation in medical imaging.

cs.CV↗

Calliope: A TTS-based Narrated E-book Creator Ensuring Exact Synchronization, Privacy, and Layout Fidelity

A narrated e-book combines synchronized audio with digital text, highlighting the currently spoken word or sentence during playback. This format supports early literacy and assists individuals with reading challenges, while also allowing general readers to seamlessly switch between reading and listening. With the emergence of natural-sounding neural Text-to-Speech (TTS) technology, several commercial services have been developed to leverage these technology for converting standard text e-books into high-quality narrated e-books. However, no open-source solutions currently exist to perform this task. In this paper, we present Calliope, an open-source framework designed to fill this gap. Our method leverages state-of-the-art open-source TTS to convert a text e-book into a narrated e-book in the EPUB 3 Media Overlay format. The method offers several innovative steps: audio timestamps are captured directly during TTS, ensuring exact synchronization between narration and text highlighting; the publisher's original typography, styling, and embedded media are strictly preserved; and the entire pipeline operates offline. This offline capability eliminates recurring API costs, mitigates privacy concerns, and avoids copyright compliance issues associated with cloud-based services. The framework currently supports the state-of-the-art open-source TTS systems XTTS-v2 and Chatterbox. A potential alternative approach involves first generating narration via TTS and subsequently synchronizing it with the text using forced alignment. However, while our method ensures exact synchronization, our experiments show that forced alignment introduces drift between the audio and text highlighting significant enough to degrade the reading experience. Source code and usage instructions are available at https://github.com/hugohammer/TTS-Narrated-Ebook-Creator.git.

cs.SD↗

ECG-IMN: Interpretable Mesomorphic Neural Networks for 12-Lead Electrocardiogram Interpretation

Deep learning has achieved expert-level performance in automated electrocardiogram (ECG) diagnosis, yet the "black-box" nature of these models hinders their clinical deployment. Trust in medical AI requires not just high accuracy but also transparency regarding the specific physiological features driving predictions. Existing explainability methods for ECGs typically rely on post-hoc approximations (e.g., Grad-CAM and SHAP), which can be unstable, computationally expensive, and unfaithful to the model's actual decision-making process. In this work, we propose the ECG-IMN, an Interpretable Mesomorphic Neural Network tailored for high-resolution 12-lead ECG classification. Unlike standard classifiers, the ECG-IMN functions as a hypernetwork: a deep convolutional backbone generates the parameters of a strictly linear model specific to each input sample. This architecture enforces intrinsic interpretability, as the decision logic is mathematically transparent and the generated weights (W) serve as exact, high-resolution feature attribution maps. We introduce a transition decoder that effectively maps latent features to sample-wise weights, enabling precise localization of pathological evidence (e.g., ST-elevation, T-wave inversion) in both time and lead dimensions. We evaluate our approach on the PTB-XL dataset for classification tasks, demonstrating that the ECG-IMN achieves competitive predictive performance (AUROC comparable to black-box baselines) while providing faithful, instance-specific explanations. By explicitly decoupling parameter generation from prediction execution, our framework bridges the gap between deep learning capability and clinical trustworthiness, offering a principled path toward "white-box" cardiac diagnostics.

cs.LG↗

Anatomy-Preserving Latent Diffusion for Generation of Brain Segmentation Masks with Ischemic Infarct

The scarcity of high-quality segmentation masks remains a major bottleneck for medical image analysis, particularly in non-contrast CT (NCCT) neuroimaging, where manual annotation is costly and variable. To address this limitation, we propose an anatomy-preserving generative framework for the unconditional synthesis of multi-class brain segmentation masks, including ischemic infarcts. The proposed approach combines a variational autoencoder trained exclusively on segmentation masks to learn an anatomical latent representation, with a diffusion model operating in this latent space to generate new samples from pure noise. At inference, synthetic masks are obtained by decoding denoised latent vectors through the frozen VAE decoder, with optional coarse control over lesion presence via a binary prompt. Qualitative results show that the generated masks preserve global brain anatomy, discrete tissue semantics, and realistic variability, while avoiding the structural artifacts commonly observed in pixel-space generative models. Overall, the proposed framework offers a simple and scalable solution for anatomy-aware mask generation in data-scarce medical imaging scenarios.

eess.IV↗

VideoHEDGE: Entropy-Based Hallucination Detection for Video-VLMs via Semantic Clustering and Spatiotemporal Perturbations

Hallucinations in video-capable vision-language models (Video-VLMs) remain frequent and high-confidence, while existing uncertainty metrics often fail to align with correctness. We introduce VideoHEDGE, a modular framework for hallucination detection in video question answering that extends entropy-based reliability estimation from images to temporally structured inputs. Given a video-question pair, VideoHEDGE draws a baseline answer and multiple high-temperature generations from both clean clips and photometrically and spatiotemporally perturbed variants, then clusters the resulting textual outputs into semantic hypotheses using either Natural Language Inference (NLI)-based or embedding-based methods. Cluster-level probability masses yield three reliability scores: Semantic Entropy (SE), RadFlag, and Vision-Amplified Semantic Entropy (VASE). We evaluate VideoHEDGE on the SoccerChat benchmark using an LLM-as-a-judge to obtain binary hallucination labels. Across three 7B Video-VLMs (Qwen2-VL, Qwen2.5-VL, and a SoccerChat-finetuned model), VASE consistently achieves the highest ROC-AUC, especially at larger distortion budgets, while SE and RadFlag often operate near chance. We further show that embedding-based clustering matches NLI-based clustering in detection performance at substantially lower computational cost, and that domain fine-tuning reduces hallucination frequency but yields only modest improvements in calibration. The hedge-bench PyPI library enables reproducible and extensible benchmarking, with full code and experimental resources available at https://github.com/Simula/HEDGE#videohedge .

cs.CV↗

A Comparative Study of Decoding Strategies in Medical Text Generation

Large Language Models (LLMs) rely on various decoding strategies to generate text, and these choices can significantly affect output quality. In healthcare, where accuracy is critical, the impact of decoding strategies remains underexplored. We investigate this effect in five open-ended medical tasks, including translation, summarization, question answering, dialogue, and image captioning, evaluating 11 decoding strategies with medically specialized and general-purpose LLMs of different sizes. Our results show that deterministic strategies generally outperform stochastic ones: beam search achieves the highest scores, while η and top-k sampling perform worst. Slower decoding methods tend to yield better quality. Larger models achieve higher scores overall but have longer inference times and are no more robust to decoding. Surprisingly, while medical LLMs outperform general ones in two of the five tasks, statistical analysis shows no overall performance advantage and reveals greater sensitivity to decoding choice. We further compare multiple evaluation metrics and find that correlations vary by task, with MAUVE showing weak agreement with BERTScore and ROUGE, as well as greater sensitivity to the decoding strategy. These results highlight the need for careful selection of decoding methods in medical applications, as their influence can sometimes exceed that of model choice.

cs.CL↗

AICRN: Attention-Integrated Convolutional Residual Network for Interpretable Electrocardiogram Analysis

The paradigm of electrocardiogram (ECG) analysis has evolved into real-time digital analysis, facilitated by artificial intelligence (AI) and machine learning (ML), which has improved the diagnostic precision and predictive capacity of cardiac diseases. This work proposes a novel deep learning (DL) architecture called the attention-integrated convolutional residual network (AICRN) to regress key ECG parameters such as the PR interval, the QT interval, the QRS duration, the heart rate, the peak amplitude of the R wave, and the amplitude of the T wave for interpretable ECG analysis. Our architecture is specially designed with spatial and channel attention-related mechanisms to address the type and spatial location of the ECG features for regression. The models employ a convolutional residual network to address vanishing and exploding gradient problems. The designed system addresses traditional analysis challenges, such as loss of focus due to human errors, and facilitates the fast and easy detection of cardiac events, thereby reducing the manual efforts required to solve analysis tasks. AICRN models outperform existing models in parameter regression with higher precision. This work demonstrates that DL can play a crucial role in the interpretability and precision of ECG analysis, opening up new clinical applications for cardiac monitoring and management.

cs.LG↗

Medico 2025: Visual Question Answering for Gastrointestinal Imaging

The Medico 2025 challenge addresses Visual Question Answering (VQA) for Gastrointestinal (GI) imaging, organized as part of the MediaEval task series. The challenge focuses on developing Explainable Artificial Intelligence (XAI) models that answer clinically relevant questions based on GI endoscopy images while providing interpretable justifications aligned with medical reasoning. It introduces two subtasks: (1) answering diverse types of visual questions using the Kvasir-VQA-x1 dataset, and (2) generating multimodal explanations to support clinical decision-making. The Kvasir-VQA-x1 dataset, created from 6,500 images and 159,549 complex question-answer (QA) pairs, serves as the benchmark for the challenge. By combining quantitative performance metrics and expert-reviewed explainability assessments, this task aims to advance trustworthy Artificial Intelligence (AI) in medical image analysis. Instructions, data access, and an updated guide for participation are available in the official competition repository: https://github.com/simula/MediaEval-Medico-2025

cs.CV↗

Inductive transfer learning from regression to classification in ECG analysis

Cardiovascular diseases (CVDs) are the leading cause of mortality worldwide, accounting for over 30% of global deaths according to the World Health Organization (WHO). Importantly, one-third of these deaths are preventable with timely and accurate diagnosis. The electrocardiogram (ECG), a non-invasive method for recording the electrical activity of the heart, is crucial for diagnosing CVDs. However, privacy concerns surrounding the use of patient ECG data in research have spurred interest in synthetic data, which preserves the statistical properties of real data without compromising patient confidentiality. This study explores the potential of synthetic ECG data for training deep learning models from regression to classification tasks and evaluates the feasibility of transfer learning to enhance classification performance on real ECG data. We experimented with popular deep learning models to predict four key cardiac parameters, namely, Heart Rate (HR), PR interval, QT interval, and QRS complex-using separate regression models. Subsequently, we leveraged these regression models for transfer learning to perform 5-class ECG signal classification. Our experiments systematically investigate whether transfer learning from regression to classification is viable, enabling better utilization of diverse open-access and synthetic ECG datasets. Our findings demonstrate that transfer learning from regression to classification improves classification performance, highlighting its potential to maximize the utility of available data and advance deep learning applications in this domain.

eess.SP↗

Multimodal Integration Challenges in Emotionally Expressive Child Avatars for Training Applications

Dynamic facial emotion is essential for believable AI-generated avatars, yet most systems remain visually static, limiting their use in simulations like virtual training for investigative interviews with abused children. We present a real-time architecture combining Unreal Engine 5 MetaHuman rendering with NVIDIA Omniverse Audio2Face to generate facial expressions from vocal prosody in photorealistic child avatars. Due to limited TTS options, both avatars were voiced using young adult female models from two systems to better fit character profiles, introducing a voice-age mismatch. This confound may affect audiovisual alignment. We used a two-PC setup to decouple speech generation from GPU-intensive rendering, enabling low-latency interaction in desktop and VR. A between-subjects study (N=70) compared audio+visual vs. visual-only conditions as participants rated emotional clarity, facial realism, and empathy for avatars expressing joy, sadness, and anger. While emotions were generally recognized - especially sadness and joy - anger was harder to detect without audio, highlighting the role of voice in high-arousal expressions. Interestingly, silencing clips improved perceived realism by removing mismatches between voice and animation, especially when tone or age felt incongruent. These results emphasize the importance of audiovisual congruence: mismatched voice undermines expression, while a good match can enhance weaker visuals - posing challenges for emotionally coherent avatars in sensitive contexts.

cs.HC↗

Using Large Language Models to Suggest Informative Prior Distributions in Bayesian Statistics

Selecting prior distributions in Bayesian statistics is challenging, resource-intensive, and subjective. We analyze using large-language models (LLMs) to suggest suitable, knowledge-based informative priors. We developed an extensive prompt asking LLMs not only to suggest priors but also to verify and reflect on their choices. We evaluated Claude Opus, Gemini 2.5 Pro, and ChatGPT-4o-mini on two real datasets: heart disease risk and concrete strength. All LLMs correctly identified the direction for all associations (e.g., that heart disease risk is higher for males). The quality of suggested priors was measured by their Kullback-Leibler divergence from the maximum likelihood estimator's distribution. The LLMs suggested both moderately and weakly informative priors. The moderate priors were often overconfident, resulting in distributions misaligned with the data. In our experiments, Claude and Gemini provided better priors than ChatGPT. For weakly informative priors, a key performance difference emerged: ChatGPT and Gemini defaulted to an "unnecessarily vague" mean of 0, while Claude did not, demonstrating a significant advantage. The ability of LLMs to identify correct associations shows their great potential as an efficient, objective method for developing informative priors. However, the primary challenge remains in calibrating the width of these priors to avoid over- and under-confidence.

stat.ME↗