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Vanessa Styles

Publications and source records attributed to Vanessa Styles.

17 recordsLinked to original sources

Error analysis of a finite element scheme for parametric mean curvature flow based on the DeTurck trick

The paper is concerned with the error analysis of a numerical scheme for the approximation of parametric mean curvature flow. The scheme we study is based on a reparametrization using the DeTurck trick and was proposed by Elliott and Fritz in [15]. In the semidiscrete case, for a spatial discretization by finite elements of order $k \geq 2$ we prove an optimal $H^1$-error estimate for the position vector. We present numerical experiments that confirm this error bound and demonstrate that the scheme has good properties with respect to the distribution of mesh points as already observed in [15].

math.NA

Existence of solution to a system of PDEs modeling the crystal growth inside lithium batteries

We study a model for lithium (Li) electrodeposition on Li-metal electrodes that leads to dendritic pattern formation. The model comprises of a system of three coupled PDEs, taking the form of an Allen--Cahn equation, a Nernst--Planck equation and a Poisson equation. We prove existence of a weak solution and stability results for this system and present numerical simulations resulting from a finite element approximation of the system, which illustrate the dendritic nature of solutions to the model.

math.AP

Finite element approximation of a phase field model for tumour growth

We consider a fully practical finite element approximation of a diffuse interface model for tumour growth that takes the form of a degenerate parabolic system. In addition to showing stability bounds for the approximation, we prove convergence, and hence existence of a solution to this system in two space dimensions. Several numerical experiments demonstrate the practicality and robustness of the proposed method.

math.NA

Finite element error analysis for a system coupling surface evolution to diffusion on the surface

We consider a numerical scheme for the approximation of a system that couples the evolution of a two--dimensional hypersurface to a reaction--diffusion equation on the surface. The surfaces are assumed to be graphs and evolve according to forced mean curvature flow. The method uses continuous, piecewise linear finite elements in space and a backward Euler scheme in time. Assuming the existence of a smooth solution we prove optimal error bounds both in $L^\infty(L^2)$ and in $L^2(H^1)$. We present several numerical experiments that confirm our theoretical findings and apply the method in order to simulate diffusion induced grain boundary motion.

math.NA

Finite element approximation of a system coupling curve evolution with prescribed normal contact to a fixed boundary to reaction-diffusion on the curve

We consider a finite element approximation for a system consisting of the evolution of a curve evolving by forced curve shortening flow coupled to a reaction-diffusion equation on the evolving curve. The curve evolves inside a given domain $Ω\subset \mathbb{R}^2$ and meets $\partial Ω$ orthogonally. The scheme for the coupled system is based on the schemes derived in [BDS17] and [DE98]. We present numerical experiments and show the experimental order of convergence of the approximation.

math.NA

Numerical analysis for a system coupling curve evolution attached orthogonally to a fixed boundary, to a reaction-diffusion equation on the curve

We consider a semi-discrete finite element approximation for a system consisting of the evolution of a planar curve evolving by forced curve shortening flow inside a given bounded domain $Ω\subset \mathbb{R}^2$, such that the curve meets the boundary $\partial Ω$ orthogonally, and the forcing is a function of the solution of a reaction-diffusion equation that holds on the evolving curve. We prove optimal error bounds for the resulting approximation and present numerical experiments.

math.NA

Preconditioning nonlocal multi-phase flow

We propose an efficient solver for saddle point problems arising from finite element approximations of nonlocal multi-phase Allen--Cahn variational inequalities. The solver is seen to behave mesh independently and to have only a very mild dependence on the number of phase field variables. In addition we prove convergence, in three GMRES iterations, of the approximation of the two phase problem, regardless of mesh size or interfacial width. Numerical results are presented that illustrate the competitiveness of this approach.

math.NA

A Practical Phase Field Method for an Elliptic Surface PDE

We consider a diffuse interface approach for solving an elliptic PDE on a given closed hypersurface. The method is based on a (bulk) finite element scheme employing numerical quadrature for the phase field function and hence is very easy to implement compared to other approaches. We estimate the error in natural norms in terms of the spatial grid size, the interface width and the order of the underlying quadrature rule. Numerical test calculations are presented which confirm the form of the error bounds.

math.NA

A tractable mathematical model for tissue growth

Using formal asymptotic methods we derive a free boundary problem representing one of the simplest mathematical descriptions of the growth and death of a tumour or other biological tissue. The mathematical model takes the form of a closed interface evolving via forced mean curvature flow (together with a `kinetic under-cooling' regularisation) where the forcing depends on the solution of a PDE that holds in the domain enclosed by the interface. We perform linear stability analysis and derive a diffuse-interface approximation of the model. Finite-element discretisations of two closely related models are presented, together with computational results comparing the approximate solutions.

q-bio.TO

Hamilton--Jacobi equations on an evolving surface

We consider the well-posedness and numerical approximation of a Hamilton--Jacobi equation on an evolving hypersurface in $\mathbb R^3$. Definitions of viscosity sub- and supersolutions are extended in a natural way to evolving hypersurfaces and provide uniqueness by comparison. An explicit in time monotone numerical approximation is derived on evolving interpolating triangulated surfaces. The scheme relies on a finite volume discretisation which does not require acute triangles. The scheme is shown to be stable and consistent leading to an existence proof via the proof of convergence. Finally an error bound is proved of the same order as in the flat stationary case.

math.NA

Cahn--Hilliard inpainting with the double obstacle potential

The inpainting of damaged images has a wide range of applications, and many different mathematical methods have been proposed to solve this problem. Inpainting with the help of Cahn--Hilliard models has been particularly successful, and it turns out that Cahn--Hilliard inpainting with the double obstacle potential can lead to better results compared to inpainting with a smooth double well potential. However, a mathematical analysis of this approach is missing so far. In this paper we give first analytical results for a Cahn--Hilliard double obstacle inpainting model regarding existence of global solutions to the time-dependent problem and stationary solutions to the time-independent problem without constraints on the parameters involved. With the help of numerical results we show the effectiveness of the approach for binary and grayscale images.

math.AP

Stability and error analysis for a diffuse interface approach to an advection-diffusion equation on a moving surface

In this paper we analyze a fully discrete numerical scheme for solving a parabolic PDE on a moving surface. The method is based on a diffuse interface approach that involves a level set description of the moving surface. Under suitable conditions on the spatial grid size, the time step and the interface width we obtain stability and error bounds with respect to natural norms. Furthermore, we present test calculations that confirm our analysis.

math.NA

Numerical Analysis for a System Coupling Curve Evolution to Reaction-Diffusion on the Curve

We consider a finite element approximation for a system consisting of the evolution of a closed planar curve by forced curve shortening flow coupled to a reaction-diffusion equation on the evolving curve. The scheme for the curve evolution is based on a parametric description allowing for tangential motion, whereas the discretisation for the PDE on the curve uses an idea from [6]. We prove optimal error bounds for the resulting fully discrete approximation and present numerical experiments. These confirm our estimates and also illustrate the advantage of the tangential motion of the mesh points in practice.

math.NA

A Cahn--Hilliard--Darcy model for tumour growth with chemotaxis and active transport

Using basic thermodynamic principles we derive a Cahn--Hilliard--Darcy model for tumour growth including nutrient diffusion, chemotaxis, active transport, adhesion, apoptosis and proliferation. The model generalises earlier models and in particular includes active transport mechanisms which ensure thermodynamic consistency. We perform a formally matched asymptotic expansion and develop several sharp interface models. Some of them are classical and some are new which for example include a jump in the nutrient density at the interface. A linear stability analysis for a growing nucleus is performed and in particular the role of the new active transport term is analysed. Numerical computations are performed to study the influence of the active transport term for specific growth scenarios.

math.AP

Whole cell tracking through the optimal control of geometric evolution laws

Cell tracking algorithms which automate and systematise the analysis of time lapse image data sets of cells are an indispensable tool in the modelling and understanding of cellular phenomena. In this study we present a theoretical framework and an algorithm for whole cell tracking. Within this work we consider that "tracking" is equivalent to a dynamic reconstruction of the whole cell data (morphologies) from static image datasets. The novelty of our work is that the tracking algorithm is driven by a model for the motion of the cell. This model may be regarded as a simplification of a recently developed physically meaningful model for cell motility. The resulting problem is the optimal control of a geometric evolution law and we discuss the formulation and numerical approximation of the optimal control problem. The overall goal of this work is to design a framework for cell tracking within which the recovered data reflects the physics of the forward model. A number of numerical simulations are presented that illustrate the applicability of our approach.

math.NA

Double obstacle phase field approach to an inverse problem for a discontinuous diffusion coefficient

We propose a double obstacle phase field approach to the recovery of piece-wise constant diffusion coefficients for elliptic partial differential equations. The approach to this inverse problem is that of optimal control in which we have a quadratic fidelity term to which we add a perimeter regularisation weighted by a parameter sigma. This yields a functional which is optimised over a set of diffusion coefficients subject to a state equation which is the underlying elliptic PDE. In order to derive a problem which is amenable to computation the perimeter functional is relaxed using a gradient energy functional together with an obstacle potential in which there is an interface parameter epsilon. This phase field approach is justified by proving Gamma-convergence to the functional with perimeter regularisation as epsilon tends to zero. The computational approach is based on a finite element approximation. This discretisation is shown to converge in an appropriate way to the solution of the phase field problem. We derive an iterative method which is shown to yield an energy decreasing sequence converging to a discrete critical point. The efficacy of the approach is illustrated with numerical experiments.

math.NA

Multi-material phase field approach to structural topology optimization

Multi-material structural topology and shape optimization problems are formulated within a phase field approach. First-order conditions are stated and the relation of the necessary conditions to classical shape derivatives are discussed. An efficient numerical method based on an $H^1$-gradient projection method is introduced and finally several numerical results demonstrate the applicability of the approach.

math.OC