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Vasileios Belagiannis

Publications and source records attributed to Vasileios Belagiannis.

At least 55 records · Page 3Linked to original sources

Knowing What to Label for Few Shot Microscopy Image Cell Segmentation

In microscopy image cell segmentation, it is common to train a deep neural network on source data, containing different types of microscopy images, and then fine-tune it using a support set comprising a few randomly selected and annotated training target images. In this paper, we argue that the random selection of unlabelled training target images to be annotated and included in the support set may not enable an effective fine-tuning process, so we propose a new approach to optimise this image selection process. Our approach involves a new scoring function to find informative unlabelled target images. In particular, we propose to measure the consistency in the model predictions on target images against specific data augmentations. However, we observe that the model trained with source datasets does not reliably evaluate consistency on target images. To alleviate this problem, we propose novel self-supervised pretext tasks to compute the scores of unlabelled target images. Finally, the top few images with the least consistency scores are added to the support set for oracle (i.e., expert) annotation and later used to fine-tune the model to the target images. In our evaluations that involve the segmentation of five different types of cell images, we demonstrate promising results on several target test sets compared to the random selection approach as well as other selection approaches, such as Shannon's entropy and Monte-Carlo dropout.

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ScanMix: Learning from Severe Label Noise via Semantic Clustering and Semi-Supervised Learning

We propose a new training algorithm, ScanMix, that explores semantic clustering and semi-supervised learning (SSL) to allow superior robustness to severe label noise and competitive robustness to non-severe label noise problems, in comparison to the state of the art (SOTA) methods. ScanMix is based on the expectation maximisation framework, where the E-step estimates the latent variable to cluster the training images based on their appearance and classification results, and the M-step optimises the SSL classification and learns effective feature representations via semantic clustering. We present a theoretical result that shows the correctness and convergence of ScanMix, and an empirical result that shows that ScanMix has SOTA results on CIFAR-10/-100 (with symmetric, asymmetric and semantic label noise), Red Mini-ImageNet (from the Controlled Noisy Web Labels), Clothing1M and WebVision. In all benchmarks with severe label noise, our results are competitive to the current SOTA.

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A Benchmark for Unsupervised Anomaly Detection in Multi-Agent Trajectories

Human intuition allows to detect abnormal driving scenarios in situations they never experienced before. Like humans detect those abnormal situations and take countermeasures to prevent collisions, self-driving cars need anomaly detection mechanisms. However, the literature lacks a standard benchmark for the comparison of anomaly detection algorithms. We fill the gap and propose the R-U-MAAD benchmark for unsupervised anomaly detection in multi-agent trajectories. The goal is to learn a representation of the normal driving from the training sequences without labels, and afterwards detect anomalies. We use the Argoverse Motion Forecasting dataset for the training and propose a test dataset of 160 sequences with human-annotated anomalies in urban environments. To this end we combine a replay of real-world trajectories and scene-dependent abnormal driving in the simulation. In our experiments we compare 11 baselines including linear models, deep auto-encoders and one-class classification models using standard anomaly detection metrics. The deep reconstruction and end-to-end one-class methods show promising results. The benchmark and the baseline models will be publicly available.

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LongReMix: Robust Learning with High Confidence Samples in a Noisy Label Environment

Deep neural network models are robust to a limited amount of label noise, but their ability to memorise noisy labels in high noise rate problems is still an open issue. The most competitive noisy-label learning algorithms rely on a 2-stage process comprising an unsupervised learning to classify training samples as clean or noisy, followed by a semi-supervised learning that minimises the empirical vicinal risk (EVR) using a labelled set formed by samples classified as clean, and an unlabelled set with samples classified as noisy. In this paper, we hypothesise that the generalisation of such 2-stage noisy-label learning methods depends on the precision of the unsupervised classifier and the size of the training set to minimise the EVR. We empirically validate these two hypotheses and propose the new 2-stage noisy-label training algorithm LongReMix. We test LongReMix on the noisy-label benchmarks CIFAR-10, CIFAR-100, WebVision, Clothing1M, and Food101-N. The results show that our LongReMix generalises better than competing approaches, particularly in high label noise problems. Furthermore, our approach achieves state-of-the-art performance in most datasets. The code is available at https://github.com/filipe-research/LongReMix.

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NVUM: Non-Volatile Unbiased Memory for Robust Medical Image Classification

Real-world large-scale medical image analysis (MIA) datasets have three challenges: 1) they contain noisy-labelled samples that affect training convergence and generalisation, 2) they usually have an imbalanced distribution of samples per class, and 3) they normally comprise a multi-label problem, where samples can have multiple diagnoses. Current approaches are commonly trained to solve a subset of those problems, but we are unaware of methods that address the three problems simultaneously. In this paper, we propose a new training module called Non-Volatile Unbiased Memory (NVUM), which non-volatility stores running average of model logits for a new regularization loss on noisy multi-label problem. We further unbias the classification prediction in NVUM update for imbalanced learning problem. We run extensive experiments to evaluate NVUM on new benchmarks proposed by this paper, where training is performed on noisy multi-label imbalanced chest X-ray (CXR) training sets, formed by Chest-Xray14 and CheXpert, and the testing is performed on the clean multi-label CXR datasets OpenI and PadChest. Our method outperforms previous state-of-the-art CXR classifiers and previous methods that can deal with noisy labels on all evaluations. Our code is available at https://github.com/FBLADL/NVUM.

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A Spatio-Temporal Multilayer Perceptron for Gesture Recognition

Gesture recognition is essential for the interaction of autonomous vehicles with humans. While the current approaches focus on combining several modalities like image features, keypoints and bone vectors, we present neural network architecture that delivers state-of-the-art results only with body skeleton input data. We propose the spatio-temporal multilayer perceptron for gesture recognition in the context of autonomous vehicles. Given 3D body poses over time, we define temporal and spatial mixing operations to extract features in both domains. Additionally, the importance of each time step is re-weighted with Squeeze-and-Excitation layers. An extensive evaluation of the TCG and Drive&Act datasets is provided to showcase the promising performance of our approach. Furthermore, we deploy our model to our autonomous vehicle to show its real-time capability and stable execution.

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Extrinsic Camera Calibration with Semantic Segmentation

Monocular camera sensors are vital to intelligent vehicle operation and automated driving assistance and are also heavily employed in traffic control infrastructure. Calibrating the monocular camera, though, is time-consuming and often requires significant manual intervention. In this work, we present an extrinsic camera calibration approach that automatizes the parameter estimation by utilizing semantic segmentation information from images and point clouds. Our approach relies on a coarse initial measurement of the camera pose and builds on lidar sensors mounted on a vehicle with high-precision localization to capture a point cloud of the camera environment. Afterward, a mapping between the camera and world coordinate spaces is obtained by performing a lidar-to-camera registration of the semantically segmented sensor data. We evaluate our method on simulated and real-world data to demonstrate low error measurements in the calibration results. Our approach is suitable for infrastructure sensors as well as vehicle sensors, while it does not require motion of the camera platform.

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Edge-Based Self-Supervision for Semi-Supervised Few-Shot Microscopy Image Cell Segmentation

Deep neural networks currently deliver promising results for microscopy image cell segmentation, but they require large-scale labelled databases, which is a costly and time-consuming process. In this work, we relax the labelling requirement by combining self-supervised with semi-supervised learning. We propose the prediction of edge-based maps for self-supervising the training of the unlabelled images, which is combined with the supervised training of a small number of labelled images for learning the segmentation task. In our experiments, we evaluate on a few-shot microscopy image cell segmentation benchmark and show that only a small number of annotated images, e.g. 10% of the original training set, is enough for our approach to reach similar performance as with the fully annotated databases on 1- to 10-shots. Our code and trained models is made publicly available

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Gradient-based Uncertainty for Monocular Depth Estimation

In monocular depth estimation, disturbances in the image context, like moving objects or reflecting materials, can easily lead to erroneous predictions. For that reason, uncertainty estimates for each pixel are necessary, in particular for safety-critical applications such as automated driving. We propose a post hoc uncertainty estimation approach for an already trained and thus fixed depth estimation model, represented by a deep neural network. The uncertainty is estimated with the gradients which are extracted with an auxiliary loss function. To avoid relying on ground-truth information for the loss definition, we present an auxiliary loss function based on the correspondence of the depth prediction for an image and its horizontally flipped counterpart. Our approach achieves state-of-the-art uncertainty estimation results on the KITTI and NYU Depth V2 benchmarks without the need to retrain the neural network. Models and code are publicly available at https://github.com/jhornauer/GrUMoDepth.

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MotionMixer: MLP-based 3D Human Body Pose Forecasting

In this work, we present MotionMixer, an efficient 3D human body pose forecasting model based solely on multi-layer perceptrons (MLPs). MotionMixer learns the spatial-temporal 3D body pose dependencies by sequentially mixing both modalities. Given a stacked sequence of 3D body poses, a spatial-MLP extracts fine grained spatial dependencies of the body joints. The interaction of the body joints over time is then modelled by a temporal MLP. The spatial-temporal mixed features are finally aggregated and decoded to obtain the future motion. To calibrate the influence of each time step in the pose sequence, we make use of squeeze-and-excitation (SE) blocks. We evaluate our approach on Human3.6M, AMASS, and 3DPW datasets using the standard evaluation protocols. For all evaluations, we demonstrate state-of-the-art performance, while having a model with a smaller number of parameters. Our code is available at: https://github.com/MotionMLP/MotionMixer

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A Multi-Task Recurrent Neural Network for End-to-End Dynamic Occupancy Grid Mapping

A common approach for modeling the environment of an autonomous vehicle are dynamic occupancy grid maps, in which the surrounding is divided into cells, each containing the occupancy and velocity state of its location. Despite the advantage of modeling arbitrary shaped objects, the used algorithms rely on hand-designed inverse sensor models and semantic information is missing. Therefore, we introduce a multi-task recurrent neural network to predict grid maps providing occupancies, velocity estimates, semantic information and the driveable area. During training, our network architecture, which is a combination of convolutional and recurrent layers, processes sequences of raw lidar data, that is represented as bird's eye view images with several height channels. The multi-task network is trained in an end-to-end fashion to predict occupancy grid maps without the usual preprocessing steps consisting of removing ground points and applying an inverse sensor model. In our evaluations, we show that our learned inverse sensor model is able to overcome some limitations of a geometric inverse sensor model in terms of representing object shapes and modeling freespace. Moreover, we report a better runtime performance and more accurate semantic predictions for our end-to-end approach, compared to our network relying on measurement grid maps as input data.

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Visual Domain Adaptation for Monocular Depth Estimation on Resource-Constrained Hardware

Real-world perception systems in many cases build on hardware with limited resources to adhere to cost and power limitations of their carrying system. Deploying deep neural networks on resource-constrained hardware became possible with model compression techniques, as well as efficient and hardware-aware architecture design. However, model adaptation is additionally required due to the diverse operation environments. In this work, we address the problem of training deep neural networks on resource-constrained hardware in the context of visual domain adaptation. We select the task of monocular depth estimation where our goal is to transform a pre-trained model to the target's domain data. While the source domain includes labels, we assume an unlabelled target domain, as it happens in real-world applications. Then, we present an adversarial learning approach that is adapted for training on the device with limited resources. Since visual domain adaptation, i.e. neural network training, has not been previously explored for resource-constrained hardware, we present the first feasibility study for image-based depth estimation. Our experiments show that visual domain adaptation is relevant only for efficient network architectures and training sets at the order of a few hundred samples. Models and code are publicly available.

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Motion Estimation in Occupancy Grid Maps in Stationary Settings Using Recurrent Neural Networks

In this work, we tackle the problem of modeling the vehicle environment as dynamic occupancy grid map in complex urban scenarios using recurrent neural networks. Dynamic occupancy grid maps represent the scene in a bird's eye view, where each grid cell contains the occupancy probability and the two dimensional velocity. As input data, our approach relies on measurement grid maps, which contain occupancy probabilities, generated with lidar measurements. Given this configuration, we propose a recurrent neural network architecture to predict a dynamic occupancy grid map, i.e. filtered occupancy and velocity of each cell, by using a sequence of measurement grid maps. Our network architecture contains convolutional long-short term memories in order to sequentially process the input, makes use of spatial context, and captures motion. In the evaluation, we quantify improvements in estimating the velocity of braking and turning vehicles compared to the state-of-the-art. Additionally, we demonstrate that our approach provides more consistent velocity estimates for dynamic objects, as well as, less erroneous velocity estimates in static area.

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Dynamic Occupancy Grid Mapping with Recurrent Neural Networks

Modeling and understanding the environment is an essential task for autonomous driving. In addition to the detection of objects, in complex traffic scenarios the motion of other road participants is of special interest. Therefore, we propose to use a recurrent neural network to predict a dynamic occupancy grid map, which divides the vehicle surrounding in cells, each containing the occupancy probability and a velocity estimate. During training, our network is fed with sequences of measurement grid maps, which encode the lidar measurements of a single time step. Due to the combination of convolutional and recurrent layers, our approach is capable to use spatial and temporal information for the robust detection of static and dynamic environment. In order to apply our approach with measurements from a moving ego-vehicle, we propose a method for ego-motion compensation that is applicable in neural network architectures with recurrent layers working on different resolutions. In our evaluations, we compare our approach with a state-of-the-art particle-based algorithm on a large publicly available dataset to demonstrate the improved accuracy of velocity estimates and the more robust separation of the environment in static and dynamic area. Additionally, we show that our proposed method for ego-motion compensation leads to comparable results in scenarios with stationary and with moving ego-vehicle.

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Perturbed and Strict Mean Teachers for Semi-supervised Semantic Segmentation

Consistency learning using input image, feature, or network perturbations has shown remarkable results in semi-supervised semantic segmentation, but this approach can be seriously affected by inaccurate predictions of unlabelled training images. There are two consequences of these inaccurate predictions: 1) the training based on the "strict" cross-entropy (CE) loss can easily overfit prediction mistakes, leading to confirmation bias; and 2) the perturbations applied to these inaccurate predictions will use potentially erroneous predictions as training signals, degrading consistency learning. In this paper, we address the prediction accuracy problem of consistency learning methods with novel extensions of the mean-teacher (MT) model, which include a new auxiliary teacher, and the replacement of MT's mean square error (MSE) by a stricter confidence-weighted cross-entropy (Conf-CE) loss. The accurate prediction by this model allows us to use a challenging combination of network, input data and feature perturbations to improve the consistency learning generalisation, where the feature perturbations consist of a new adversarial perturbation. Results on public benchmarks show that our approach achieves remarkable improvements over the previous SOTA methods in the field. Our code is available at https://github.com/yyliu01/PS-MT.

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ACPL: Anti-curriculum Pseudo-labelling for Semi-supervised Medical Image Classification

Effective semi-supervised learning (SSL) in medical image analysis (MIA) must address two challenges: 1) work effectively on both multi-class (e.g., lesion classification) and multi-label (e.g., multiple-disease diagnosis) problems, and 2) handle imbalanced learning (because of the high variance in disease prevalence). One strategy to explore in SSL MIA is based on the pseudo labelling strategy, but it has a few shortcomings. Pseudo-labelling has in general lower accuracy than consistency learning, it is not specifically designed for both multi-class and multi-label problems, and it can be challenged by imbalanced learning. In this paper, unlike traditional methods that select confident pseudo label by threshold, we propose a new SSL algorithm, called anti-curriculum pseudo-labelling (ACPL), which introduces novel techniques to select informative unlabelled samples, improving training balance and allowing the model to work for both multi-label and multi-class problems, and to estimate pseudo labels by an accurate ensemble of classifiers (improving pseudo label accuracy). We run extensive experiments to evaluate ACPL on two public medical image classification benchmarks: Chest X-Ray14 for thorax disease multi-label classification and ISIC2018 for skin lesion multi-class classification. Our method outperforms previous SOTA SSL methods on both datasets

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Lightweight Monocular Depth Estimation through Guided Decoding

We present a lightweight encoder-decoder architecture for monocular depth estimation, specifically designed for embedded platforms. Our main contribution is the Guided Upsampling Block (GUB) for building the decoder of our model. Motivated by the concept of guided image filtering, GUB relies on the image to guide the decoder on upsampling the feature representation and the depth map reconstruction, achieving high resolution results with fine-grained details. Based on multiple GUBs, our model outperforms the related methods on the NYU Depth V2 dataset in terms of accuracy while delivering up to 35.1 fps on the NVIDIA Jetson Nano and up to 144.5 fps on the NVIDIA Xavier NX. Similarly, on the KITTI dataset, inference is possible with up to 23.7 fps on the Jetson Nano and 102.9 fps on the Xavier NX. Our code and models are made publicly available.

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Self-supervised Mean Teacher for Semi-supervised Chest X-ray Classification

The training of deep learning models generally requires a large amount of annotated data for effective convergence and generalisation. However, obtaining high-quality annotations is a laboursome and expensive process due to the need of expert radiologists for the labelling task. The study of semi-supervised learning in medical image analysis is then of crucial importance given that it is much less expensive to obtain unlabelled images than to acquire images labelled by expert radiologists. Essentially, semi-supervised methods leverage large sets of unlabelled data to enable better training convergence and generalisation than using only the small set of labelled images. In this paper, we propose Self-supervised Mean Teacher for Semi-supervised (S$^2$MTS$^2$) learning that combines self-supervised mean-teacher pre-training with semi-supervised fine-tuning. The main innovation of S$^2$MTS$^2$ is the self-supervised mean-teacher pre-training based on the joint contrastive learning, which uses an infinite number of pairs of positive query and key features to improve the mean-teacher representation. The model is then fine-tuned using the exponential moving average teacher framework trained with semi-supervised learning. We validate S$^2$MTS$^2$ on the multi-label classification problems from Chest X-ray14 and CheXpert, and the multi-class classification from ISIC2018, where we show that it outperforms the previous SOTA semi-supervised learning methods by a large margin.

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