arXiv subjects

Vicente Grau

Publications and source records attributed to Vicente Grau.

At least 19 recordsLinked to original sources

arXiv2026

Motion-Conditioned Multi-View Fusion for Myocardial Infarction Localization from Echocardiography

Myocardial infarction (MI) remains a leading cause of mortality worldwide. Echocardiography (Echo) is a widely available modality for MI assessment, where regional wall motion abnormality is a key indicator. Prior learning based methods for myocardial motion analysis often use handcrafted descriptors or densely supervised estimation, but the need for extensive annotation limits applicability. Foundation models have recently improved vision-based Echo analysis; however, most methods operate on single views and segment-level localization remains unreliable under view-dependent ambiguity, especially in apical views. To address this, we propose MCF-Net, a novel motion-guided multi-view fusion framework that fuses myocardial motion cues with foundation model representations to localize infarction. Visual features are extracted using EchoPrime, a pretrained Echo foundation model shared across dual views. Cardiac motion is modeled with extremely sparse supervision: a single annotated template frame is transferred across videos to initialize point tracking, avoiding dense labels. Motion-derived segment-aware soft masks provide coarse spatial priors that selectively enhance features for challenging myocardial segments. A motion-conditioned fusion mechanism then integrates motion and vision across views, refining predictions without overriding strong appearance cues. On segment-level MI localization, MCF-Net achieves 72.4\% F1 and 84.9\% accuracy, outperforming state-of-the-art motion-only, vision-only, and fusion baselines.

cs.CV↗

arXiv2026

Seeing Beyond the Image: ECG and Anatomical Knowledge-Guided Myocardial Scar Segmentation from Late Gadolinium-Enhanced Images

Accurate segmentation of myocardial scar from late gadolinium enhanced (LGE) cardiac MRI is essential for evaluating tissue viability, yet remains challenging due to variable contrast and imaging artifacts. Electrocardiogram (ECG) signals provide complementary physiological information, as conduction abnormalities can help localize or suggest scarred myocardial regions. In this work, we propose a novel multimodal framework that integrates ECG-derived electrophysiological information with anatomical priors from the AHA-17 atlas for physiologically consistent LGE-based scar segmentation. As ECGs and LGE-MRIs are not acquired simultaneously, we introduce a Temporal Aware Feature Fusion (TAFF) mechanism that dynamically weights and fuses features based on their acquisition time difference. Our method was evaluated on a clinical dataset and achieved substantial gains over the state-of-the-art image-only baseline (nnU-Net), increasing the average Dice score for scars from 0.6149 to 0.8463 and achieving high performance in both precision (0.9115) and sensitivity (0.9043). These results show that integrating physiological and anatomical knowledge allows the model to "see beyond the image", setting a new direction for robust and physiologically grounded cardiac scar segmentation.

cs.CV↗

arXiv2026

EchoLVFM: One-Step Video Generation via Latent Flow Matching for Echocardiogram Synthesis

Echocardiography is widely used for assessing cardiac function, where clinically meaningful parameters such as left-ventricular ejection fraction (EF) play a central role in diagnosis and management. Generative models capable of synthesising realistic echocardiogram videos with explicit control over such parameters are valuable for data augmentation, counterfactual analysis, and specialist training. However, existing approaches typically rely on computationally expensive multi-step sampling and aggressive temporal normalisation, limiting efficiency and applicability to heterogeneous real-world data. We introduce EchoLVFM, a one-step latent video flow-matching framework for controllable echocardiogram generation. Operating in the latent space, EchoLVFM synthesises temporally coherent videos in a single inference step, achieving a $\mathbf{\sim 50\times}$ improvement in sampling efficiency compared to multi-step flow baselines while maintaining visual fidelity. The model supports global conditioning on clinical variables, demonstrated through precise control of EF, and enables reconstruction and counterfactual generation from partially observed sequences. A masked conditioning strategy further removes fixed-length constraints, allowing shorter sequences to be retained rather than discarded. We evaluate EchoLVFM on the CAMUS dataset under challenging single-frame conditioning. Quantitative and qualitative results demonstrate competitive video quality, strong EF adherence, and 57.9% discrimination accuracy by expert clinicians which is close to chance. These findings indicate that efficient, one-step flow matching can enable practical, controllable echocardiogram video synthesis without sacrificing fidelity. Code available at: https://github.com/EngEmmanuel/EchoLVFM

eess.IV↗

arXiv2025

Female anatomies disguise ECG abnormalities following myocardial infarction: an AI-enabled modelling and simulation study

The electrocardiogram (ECG) is modulated by torso-heart anatomy, and this challenges patients' diagnosis and risk stratification. This study aims to quantify how torso-heart anatomical factors affect sex-differences in ECG biomarkers in acute and chronic myocardial infarction (MI). We exploit the perfect control of AI-augmented multiscale modelling and simulation, based on clinical magnetic resonance imaging (MRI) data and ECGs for model construction and validation. A cohort of 1720 torso-ventricular anatomies (50% female) was constructed from MRIs of healthy and post-MI participants in the UK Biobank study. 8600 ECG simulations were performed considering anatomical variability and 3 electrophysiological stages (healthy, acutely ischemic, and infarcted). The effect of cardiac size, position, and orientation on each ECG biomarker was quantified. Female anatomies had larger distances between the infarct and ECG electrodes (relative to cardiac size), and larger angles between the infarct normal and ECG lead axes, both primarily caused by their more superior cardiac position. This reduced ST-elevation and caused low-amplitude late depolarisation and repolarisation tails to be missed, shortening QRS duration (QRSd) and T-peak-to-end interval (TpTe). The position and orientation of the heart impacted TpTe more severely than QRSd. AI-enabled mechanistic modelling and simulation identify smaller ventricles, superior cardiac position, and different ventricular orientation as key anatomical contributors of shorter QRS and T waves, and lower ST-elevation, in female versus male anatomies. This provides a blueprint for quantifying the impact of anatomical sex differences on functional markers and enables future work in tailoring clinical guidelines considering unique patient anatomy to reduce biased outcomes.

physics.med-ph↗

arXiv2025

Anatomical basis of sex differences in the electrocardiogram identified by three-dimensional torso-heart imaging reconstruction pipeline

The electrocardiogram (ECG) is used for diagnosis and risk stratification in myocardial infarction (MI). Women have a higher incidence of missed MI diagnosis and complications following infarction, and to address this we aim to provide quantitative information on sex-differences in ECG and torso-ventricular anatomical features and their interdependence. A novel computational automated pipeline is presented enabling the three-dimensional reconstruction of torso-ventricular anatomies for 425 post-MI subjects and 1051 healthy controls from UK Biobank clinical images. Regression models were created relating torso-ventricular and ECG parameters. We found that female hearts were positioned more posteriorly and superiorly than male, and in MI hearts were oriented more horizontally, especially for women. Post-MI women exhibited less QRS prolongation, requiring 27% more prolongation than men to exceed 120ms. Only half of the sex difference in QRS duration was associated with smaller female cavities. Lower STj amplitude in women was striking, associated with smaller ventricles, but also more superior and posterior cardiac position. Post-MI, T wave amplitude and R axis deviations were more strongly associated with posterior and horizontal cardiac positioning in women than in men. Our study highlights the need to quantify sex differences in anatomical features, their implications in ECG interpretation, and the application of clinical ECG thresholds in post-MI.

physics.med-ph↗

arXiv2025

AortaDiff: A Unified Multitask Diffusion Framework For Contrast-Free AAA Imaging

While contrast-enhanced CT (CECT) is standard for assessing abdominal aortic aneurysms (AAA), the required iodinated contrast agents pose significant risks, including nephrotoxicity, patient allergies, and environmental harm. To reduce contrast agent use, recent deep learning methods have focused on generating synthetic CECT from non-contrast CT (NCCT) scans. However, most adopt a multi-stage pipeline that first generates images and then performs segmentation, which leads to error accumulation and fails to leverage shared semantic and anatomical structures. To address this, we propose a unified deep learning framework that generates synthetic CECT images from NCCT scans while simultaneously segmenting the aortic lumen and thrombus. Our approach integrates conditional diffusion models (CDM) with multi-task learning, enabling end-to-end joint optimization of image synthesis and anatomical segmentation. Unlike previous multitask diffusion models, our approach requires no initial predictions (e.g., a coarse segmentation mask), shares both encoder and decoder parameters across tasks, and employs a semi-supervised training strategy to learn from scans with missing segmentation labels, a common constraint in real-world clinical data. We evaluated our method on a cohort of 264 patients, where it consistently outperformed state-of-the-art single-task and multi-stage models. For image synthesis, our model achieved a PSNR of 25.61 dB, compared to 23.80 dB from a single-task CDM. For anatomical segmentation, it improved the lumen Dice score to 0.89 from 0.87 and the challenging thrombus Dice score to 0.53 from 0.48 (nnU-Net). These segmentation enhancements led to more accurate clinical measurements, reducing the lumen diameter MAE to 4.19 mm from 5.78 mm and the thrombus area error to 33.85% from 41.45% when compared to nnU-Net. Code is available at https://github.com/yuxuanou623/AortaDiff.git.

cs.CV↗

arXiv2025

AngioDG: Interpretable Channel-informed Feature-modulated Single-source Domain Generalization for Coronary Vessel Segmentation in X-ray Angiography

Cardiovascular diseases are the leading cause of death globally, with X-ray Coronary Angiography (XCA) as the gold standard during real-time cardiac interventions. Segmentation of coronary vessels from XCA can facilitate downstream quantitative assessments, such as measurement of the stenosis severity and enhancing clinical decision-making. However, developing generalizable vessel segmentation models for XCA is challenging due to variations in imaging protocols and patient demographics that cause domain shifts. These limitations are exacerbated by the lack of annotated datasets, making Single-source Domain Generalization (SDG) a necessary solution for achieving generalization. Existing SDG methods are largely augmentation-based, which may not guarantee the mitigation of overfitting to augmented or synthetic domains. We propose a novel approach, ``AngioDG", to bridge this gap by channel regularization strategy to promote generalization. Our method identifies the contributions of early feature channels to task-specific metrics for DG, facilitating interpretability, and then reweights channels to calibrate and amplify domain-invariant features while attenuating domain-specific ones. We evaluate AngioDG on 6 x-ray angiography datasets for coronary vessels segmentation, achieving the best out-of-distribution performance among the compared methods, while maintaining consistent in-domain test performance.

cs.CV↗

arXiv2025

From Gaze to Insight: Bridging Human Visual Attention and Vision Language Model Explanation for Weakly-Supervised Medical Image Segmentation

Medical image segmentation remains challenging due to the high cost of pixel-level annotations for training. In the context of weak supervision, clinician gaze data captures regions of diagnostic interest; however, its sparsity limits its use for segmentation. In contrast, vision-language models (VLMs) provide semantic context through textual descriptions but lack the explanation precision required. Recognizing that neither source alone suffices, we propose a teacher-student framework that integrates both gaze and language supervision, leveraging their complementary strengths. Our key insight is that gaze data indicates where clinicians focus during diagnosis, while VLMs explain why those regions are significant. To implement this, the teacher model first learns from gaze points enhanced by VLM-generated descriptions of lesion morphology, establishing a foundation for guiding the student model. The teacher then directs the student through three strategies: (1) Multi-scale feature alignment to fuse visual cues with textual semantics; (2) Confidence-weighted consistency constraints to focus on reliable predictions; (3) Adaptive masking to limit error propagation in uncertain areas. Experiments on the Kvasir-SEG, NCI-ISBI, and ISIC datasets show that our method achieves Dice scores of 80.78%, 80.53%, and 84.22%, respectively-improving 3-5% over gaze baselines without increasing the annotation burden. By preserving correlations among predictions, gaze data, and lesion descriptions, our framework also maintains clinical interpretability. This work illustrates how integrating human visual attention with AI-generated semantic context can effectively overcome the limitations of individual weak supervision signals, thereby advancing the development of deployable, annotation-efficient medical AI systems. Code is available at: https://github.com/jingkunchen/FGI.

cs.CV↗

arXiv2025

From Transthoracic to Transesophageal: Cross-Modality Generation using LoRA Diffusion

Deep diffusion models excel at realistic image synthesis but demand large training sets-an obstacle in data-scarce domains like transesophageal echocardiography (TEE). While synthetic augmentation has boosted performance in transthoracic echo (TTE), TEE remains critically underrepresented, limiting the reach of deep learning in this high-impact modality. We address this gap by adapting a TTE-trained, mask-conditioned diffusion backbone to TEE with only a limited number of new cases and adapters as small as $10^5$ parameters. Our pipeline combines Low-Rank Adaptation with MaskR$^2$, a lightweight remapping layer that aligns novel mask formats with the pretrained model's conditioning channels. This design lets users adapt models to new datasets with a different set of anatomical structures to the base model's original set. Through a targeted adaptation strategy, we find that adapting only MLP layers suffices for high-fidelity TEE synthesis. Finally, mixing less than 200 real TEE frames with our synthetic echoes improves the dice score on a multiclass segmentation task, particularly boosting performance on underrepresented right-heart structures. Our results demonstrate that (1) semantically controlled TEE images can be generated with low overhead, (2) MaskR$^2$ effectively transforms unseen mask formats into compatible formats without damaging downstream task performance, and (3) our method generates images that are effective for improving performance on a downstream task of multiclass segmentation.

eess.IV↗

arXiv2025

3D Cardiac Anatomy Generation Using Mesh Latent Diffusion Models

Diffusion models have recently gained immense interest for their generative capabilities, specifically the high quality and diversity of the synthesized data. However, examples of their applications in 3D medical imaging are still scarce, especially in cardiology. Generating diverse realistic cardiac anatomies is crucial for applications such as in silico trials, electromechanical computer simulations, or data augmentations for machine learning models. In this work, we investigate the application of Latent Diffusion Models (LDMs) for generating 3D meshes of human cardiac anatomies. To this end, we propose a novel LDM architecture -- MeshLDM. We apply the proposed model on a dataset of 3D meshes of left ventricular cardiac anatomies from patients with acute myocardial infarction and evaluate its performance in terms of both qualitative and quantitative clinical and 3D mesh reconstruction metrics. The proposed MeshLDM successfully captures characteristics of the cardiac shapes at end-diastolic (relaxation) and end-systolic (contraction) cardiac phases, generating meshes with a 2.4% difference in population mean compared to the gold standard.

eess.IV↗

arXiv2025

Personalized 4D Whole Heart Geometry Reconstruction from Cine MRI for Cardiac Digital Twins

Cardiac digital twins (CDTs) provide personalized in-silico cardiac representations and hold great potential for precision medicine in cardiology. However, whole-heart CDT models that simulate the full organ-scale electromechanics of all four heart chambers remain limited. In this work, we propose a weakly supervised learning model to reconstruct 4D (3D+t) heart mesh directly from multi-view 2D cardiac cine MRIs. This is achieved by learning a self-supervised mapping between cine MRIs and 4D cardiac meshes, enabling the generation of personalized heart models that closely correspond to input cine MRIs. The resulting 4D heart meshes can facilitate the automatic extraction of key cardiac variables, including ejection fraction and dynamic chamber volume changes with high temporal resolution. It demonstrates the feasibility of inferring personalized 4D heart models from cardiac MRIs, paving the way for an efficient CDT platform for precision medicine. The code will be publicly released once the manuscript is accepted.

eess.IV↗

arXiv2025

An Automated Computational Pipeline for Generating Large-Scale Cohorts of Patient-Specific Ventricular Models in Electromechanical In Silico Trials

In recent years, human in silico trials have gained significant traction as a powerful approach to evaluate the effects of drugs, clinical interventions, and medical devices. In silico trials not only minimise patient risks but also reduce reliance on animal testing. However, the implementation of in silico trials presents several time-consuming challenges. It requires the creation of large cohorts of virtual patients. Each virtual patient is described by their anatomy with a volumetric mesh and electrophysiological and mechanical dynamics through mathematical equations and parameters. Furthermore, simulated conditions need definition including stimulation protocols and therapy evaluation. For large virtual cohorts, this requires automatic and efficient pipelines for generation of corresponding files. In this work, we present a computational pipeline to automatically create large virtual patient cohort files to conduct large-scale in silico trials through cardiac electromechanical simulations. The pipeline generates the files describing meshes, labels, and data required for the simulations directly from unprocessed surface meshes. We applied the pipeline to generate over 100 virtual patients from various datasets and performed simulations to demonstrate capacity to conduct in silico trials for virtual patients using verified and validated electrophysiology and electromechanics models for the context of use. The proposed pipeline is adaptable to accommodate different types of ventricular geometries and mesh processing tools, ensuring its versatility in handling diverse clinical datasets. By establishing an automated framework for large scale simulation studies as required for in silico trials and providing open-source code, our work aims to support scalable, personalised cardiac simulations in research and clinical applications.

cs.CE↗

arXiv2025

Personalized Topology-Informed Localization of Standard 12-Lead ECG Electrode Placement from Incomplete Cardiac MRIs for Efficient Cardiac Digital Twins

Cardiac digital twins (CDTs) offer personalized in-silico cardiac representations for the inference of multi-scale properties tied to cardiac mechanisms. The creation of CDTs requires precise information about the electrode position on the torso, especially for the personalized electrocardiogram (ECG) calibration. However, current studies commonly rely on additional acquisition of torso imaging and manual/semi-automatic methods for ECG electrode localization. In this study, we propose a novel and efficient topology-informed model to fully automatically extract personalized ECG standard electrode locations from 2D clinically standard cardiac MRIs. Specifically, we obtain the sparse torso contours from the cardiac MRIs and then localize the standard electrodes of 12-lead ECG from the contours. Cardiac MRIs aim at imaging of the heart instead of the torso, leading to incomplete torso geometry within the imaging. To tackle the missing topology, we incorporate the electrodes as a subset of the keypoints, which can be explicitly aligned with the 3D torso topology. The experimental results demonstrate that the proposed model outperforms the time-consuming conventional model projection-based method in terms of accuracy (Euclidean distance: $1.24 \pm 0.293$ cm vs. $1.48 \pm 0.362$ cm) and efficiency ($2$~s vs. $30$-$35$~min). We further demonstrate the effectiveness of using the detected electrodes for in-silico ECG simulation, highlighting their potential for creating accurate and efficient CDT models. The code is available at https://github.com/lileitech/12lead_ECG_electrode_localizer.

eess.IV↗

arXiv2025

Unsupervised Patch-GAN with Targeted Patch Ranking for Fine-Grained Novelty Detection in Medical Imaging

Detecting novel anomalies in medical imaging is challenging due to the limited availability of labeled data for rare abnormalities, which often display high variability and subtlety. This challenge is further compounded when small abnormal regions are embedded within larger normal areas, as whole-image predictions frequently overlook these subtle deviations. To address these issues, we propose an unsupervised Patch-GAN framework designed to detect and localize anomalies by capturing both local detail and global structure. Our framework first reconstructs masked images to learn fine-grained, normal-specific features, allowing for enhanced sensitivity to minor deviations from normality. By dividing these reconstructed images into patches and assessing the authenticity of each patch, our approach identifies anomalies at a more granular level, overcoming the limitations of whole-image evaluation. Additionally, a patch-ranking mechanism prioritizes regions with higher abnormal scores, reinforcing the alignment between local patch discrepancies and the global image context. Experimental results on the ISIC 2016 skin lesion and BraTS 2019 brain tumor datasets validate our framework's effectiveness, achieving AUCs of 95.79% and 96.05%, respectively, and outperforming three state-of-the-art baselines.

cs.CV↗

arXiv2025

Contrast-Free Myocardial Scar Segmentation in Cine MRI using Motion and Texture Fusion

Late gadolinium enhancement MRI (LGE MRI) is the gold standard for the detection of myocardial scars for post myocardial infarction (MI). LGE MRI requires the injection of a contrast agent, which carries potential side effects and increases scanning time and patient discomfort. To address these issues, we propose a novel framework that combines cardiac motion observed in cine MRI with image texture information to segment the myocardium and scar tissue in the left ventricle. Cardiac motion tracking can be formulated as a full cardiac image cycle registration problem, which can be solved via deep neural networks. Experimental results prove that the proposed method can achieve scar segmentation based on non-contrasted cine images with comparable accuracy to LGE MRI. This demonstrates its potential as an alternative to contrast-enhanced techniques for scar detection.

eess.IV↗

arXiv2024

DeepCA: Deep Learning-based 3D Coronary Artery Tree Reconstruction from Two 2D Non-simultaneous X-ray Angiography Projections

Cardiovascular diseases (CVDs) are the most common cause of death worldwide. Invasive x-ray coronary angiography (ICA) is one of the most important imaging modalities for the diagnosis of CVDs. ICA typically acquires only two 2D projections, which makes the 3D geometry of coronary vessels difficult to interpret, thus requiring 3D coronary artery tree reconstruction from two projections. State-of-the-art approaches require significant manual interactions and cannot correct the non-rigid cardiac and respiratory motions between non-simultaneous projections. In this study, we propose a novel deep learning pipeline named \emph{DeepCA}. We leverage the Wasserstein conditional generative adversarial network with gradient penalty, latent convolutional transformer layers, and a dynamic snake convolutional critic to implicitly compensate for the non-rigid motion and provide 3D coronary artery tree reconstruction. Through simulating projections from coronary computed tomography angiography (CCTA), we achieve the generalisation of 3D coronary tree reconstruction on real non-simultaneous ICA projections. We incorporate an application-specific evaluation metric to validate our proposed model on both a CCTA dataset and a real ICA dataset, together with Chamfer $\ell_2$ distance. The results demonstrate promising performance of our DeepCA model in vessel topology preservation, recovery of missing features, and generalisation ability to real ICA data. To the best of our knowledge, this is the first study that leverages deep learning to achieve 3D coronary tree reconstruction from two real non-simultaneous x-ray angiographic projections.

eess.IV↗

arXiv2024

NeCA: 3D Coronary Artery Tree Reconstruction from Two 2D Projections via Neural Implicit Representation

Cardiovascular diseases (CVDs) are the most common health threats worldwide. 2D X-ray invasive coronary angiography (ICA) remains the most widely adopted imaging modality for CVD assessment during real-time cardiac interventions. However, it is often difficult for cardiologists to interpret the 3D geometry of coronary vessels based on 2D planes. Moreover, due to the radiation limit, often only two angiographic projections are acquired, providing limited information of the vessel geometry and necessitating 3D coronary tree reconstruction based only on two ICA projections. In this paper, we propose a self-supervised deep learning method called NeCA, which is based on neural implicit representation using the multiresolution hash encoder and differentiable cone-beam forward projector layer, in order to achieve 3D coronary artery tree reconstruction from two 2D projections. We validate our method using six different metrics on a dataset generated from coronary computed tomography angiography of right coronary artery and left anterior descending artery. The evaluation results demonstrate that our NeCA method, without requiring 3D ground truth for supervision or large datasets for training, achieves promising performance in both vessel topology and branch-connectivity preservation compared to the supervised deep learning model.

eess.IV↗

arXiv2024

Medical Graph RAG: Towards Safe Medical Large Language Model via Graph Retrieval-Augmented Generation

We introduce a novel graph-based Retrieval-Augmented Generation (RAG) framework specifically designed for the medical domain, called \textbf{MedGraphRAG}, aimed at enhancing Large Language Model (LLM) capabilities for generating evidence-based medical responses, thereby improving safety and reliability when handling private medical data. Graph-based RAG (GraphRAG) leverages LLMs to organize RAG data into graphs, showing strong potential for gaining holistic insights from long-form documents. However, its standard implementation is overly complex for general use and lacks the ability to generate evidence-based responses, limiting its effectiveness in the medical field. To extend the capabilities of GraphRAG to the medical domain, we propose unique Triple Graph Construction and U-Retrieval techniques over it. In our graph construction, we create a triple-linked structure that connects user documents to credible medical sources and controlled vocabularies. In the retrieval process, we propose U-Retrieval which combines Top-down Precise Retrieval with Bottom-up Response Refinement to balance global context awareness with precise indexing. These effort enable both source information retrieval and comprehensive response generation. Our approach is validated on 9 medical Q\&A benchmarks, 2 health fact-checking benchmarks, and one collected dataset testing long-form generation. The results show that MedGraphRAG consistently outperforms state-of-the-art models across all benchmarks, while also ensuring that responses include credible source documentation and definitions. Our code is released at: https://github.com/MedicineToken/Medical-Graph-RAG.

cs.CV↗