arXiv subjects

Vinicius Diniz Mayrink

Publications and source records attributed to Vinicius Diniz Mayrink.

2 recordsLinked to original sources

arXiv2024

A Class of Semiparametric Yang and Prentice Frailty Models

The Yang and Prentice (YP) regression models have garnered interest from the scientific community due to their ability to analyze data whose survival curves exhibit intersection. These models include proportional hazards (PH) and proportional odds (PO) models as specific cases. However, they encounter limitations when dealing with multivariate survival data due to potential dependencies between the times-to-event. A solution is introducing a frailty term into the hazard functions, making it possible for the times-to-event to be considered independent, given the frailty term. In this study, we propose a new class of YP models that incorporate frailty. We use the exponential distribution, the piecewise exponential distribution (PE), and Bernstein polynomials (BP) as baseline functions. Our approach adopts a Bayesian methodology. The proposed models are evaluated through a simulation study, which shows that the YP frailty models with BP and PE baselines perform similarly to the generator parametric model of the data. We apply the models in two real data sets.

stat.ME↗

arXiv2013

Sparse latent factor models with interactions: Analysis of gene expression data

Sparse latent multi-factor models have been used in many exploratory and predictive problems with high-dimensional multivariate observations. Because of concerns with identifiability, the latent factors are almost always assumed to be linearly related to measured feature variables. Here we explore the analysis of multi-factor models with different structures of interactions between latent factors, including multiplicative effects as well as a more general framework for nonlinear interactions introduced via the Gaussian Process. We utilize sparsity priors to test whether the factors and interaction terms have significant effect. The performance of the models is evaluated through simulated and real data applications in genomics. Variation in the number of copies of regions of the genome is a well-known and important feature of most cancers. We examine interactions between factors directly associated with different chromosomal regions detected with copy number alteration in breast cancer data. In this context, significant interaction effects for specific genes suggest synergies between duplications and deletions in different regions of the chromosome.

stat.AP↗