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Volker Schmidt

Publications and source records attributed to Volker Schmidt.

At least 19 recordsLinked to original sources

Statistical analysis of virion-cell interactions mediated by peptide nanofibrils and peptide amphiphiles using STEM tomography

Peptide nanofibrils (PNFs) and peptide amphiphiles (PAs) are promising tools for enhancing viral transduction and gene transfer. However, quantitative insight into how their supramolecular architecture governs virion-cell interactions is limited. Here, we introduce a framework for the acquisition, processing, and statistical analysis of scanning transmission electron microscopy (STEM) tomograms to objectively quantify peptide-virion-cell interactions. Using four transduction-enhancing peptides (D4, Vectofusin-1, palmitic acid-PA (pal-PA), and eicosapentaenoic-PA (eic-PA)), peptide aggregate morphology, interfacial contact areas, and the spatial organization of virions with respect to peptides and cells were analyzed using advanced geometric descriptors. All peptides efficiently captured virions, resulting in few free virions, but they differ in how strictly virions were spatially confined near the cell surface. These differences reflect alternative spatial organization strategies, which are likely crucial factors influencing transduction-enhancing efficacy. Our approach provides a novel, generalizable method to evaluate infection-enhancing nanomaterials and guides the rational design of next-generation peptide assemblies for therapeutic viral delivery.

physics.bio-ph

Virtual materials testing of ASSB cathodes combining AI-based stochastic 3D modeling and numerical simulations

The performance of all-solid-state battery (ASSB) cathodes strongly depends on their microstructure. Optimizing the cathode morphology can therefore enhance effective macroscopic properties such as ionic and electronic conductivity. The search for optimized microstructures can be facilitated by virtual materials testing: By integrating image analysis and stochastic microstructure modeling to generate a wide range of realistic 3D microstructures and evaluate their effective macroscopic properties by means of numerical simulations, thereby reducing the need for extensive physical experiments. This approach allows for the investigation of structure-property relationships through parametric regression models that incorporate relevant geometrical descriptors of microstructures such as volume fractions, mean geodesic tortuosities, specific surface areas, and constrictivities. By linking these geometrical descriptors to macroscopic properties, virtual materials testing provides quantitative insight into how microstructure influences material performance. In the present paper, this framework is applied for ASSB cathodes. In addition, by systematically varying model parameters, a broad range of 3D microstructures can be generated, which remain close to the original cathode morphology while inducing targeted changes in selected geometrical descriptors. The resulting database enables the calibration of regression models whose predictive performance is assessed by comparing predicted and simulated effective properties such as the ionic and electronic conductivity, thereby quantifying how accurately combinations of geometrical descriptors can explain and predict variations in effective macroscopic properties.

cond-mat.mtrl-sci

Predicting the 3D microstructure of SOFC anodes from 2D SEM images using stochastic microstructure modeling and CNNs

The 3D microstructure of solid oxide fuel cell anodes significantly influences their electrochemical performance, but conventional methods for acquiring high-resolution microstructural 3D data such as focused ion beam scanning electron microscopy (FIB-SEM) are costly in both time and resources. In contrast, obtaining 2D images, such as from scanning electron microscopy (SEM), is more accessible, though typically providing insufficient information to accurately characterize the 3D microstructure. To address this challenge, we propose a novel approach that predicts the 3D microstructure from 2D SEM images. The presented method utilizes a low-parametric 3D model from stochastic geometry to generate a large number of virtual 3D microstructures and employs a physics-based SEM simulation tool to obtain the corresponding 2D SEM images. By systematically varying the underlying model parameters, a large dataset can be generated to train convolutional neural networks (CNNs). By doing so, we can statistically reconstruct the 3D microstructure from 2D SEM images by drawing realizations from the stochastic 3D model using the predicted model parameters. In addition, we conducted an error analysis on key geometrical descriptors to quantitatively evaluate the accuracy and reliability of this stereological prediction tool.

cond-mat.mtrl-sci

Fitting Generalized Power Diagrams to 3D Image Data: A Prerequisite for Virtual Materials Testing

This paper reviews algorithmic and modeling approaches for fitting generalized power diagrams to three-dimensional image data, a key step in virtual materials testing (VMT). Beyond their practical relevance to materials science, these tessellation models connect to several active areas of applied mathematics, including optimization, computational geometry, stochastic modeling, and optimal transport. Their formulation combines concepts from convex analysis and geometric clustering, offering a rich interplay between theory and computation. We survey recent applications and quantitatively compare algorithmic strategies for fitting Voronoi diagrams, power diagrams, and generalized balanced power diagrams (GBPDs), including linear and nonlinear programming, stochastic optimization via the cross-entropy method, and gradient-based approaches. Comparative results on real datasets illustrate trade-offs between algorithmic complexity and model accuracy.

cs.CV

Predicting air flow in calendered paper sheets from $\mu$-CT data: combining physics with morphology

Predicting the macroscopic properties of thin fiber-based porous materials from their microscopic morphology remains challenging because of the structural heterogeneity of these materials. In this study, computational fluid dynamics simulations were performed to compute volume air flow based on tomographic image data of uncompressed and compressed paper sheets. To reduce computational demands, a pore network model was employed, allowing volume air flow to be approximated with less computational effort. To improve prediction accuracy, geometric descriptors of the pore space, such as porosity, surface area, median pore radius, and geodesic tortuosity, were combined with predictions of the pore network model. This integrated approach significantly improves the predictive power of the pore network model and indicates which aspects of the pore space morphology are not accurately represented within the pore network model. In particular, we illustrate that a high correlation among descriptors does not necessarily imply redundancy in a combined prediction.

physics.flu-dyn

Efficient Rare-Event Simulation for Random Geometric Graphs via Importance Sampling

Random geometric graphs defined on Euclidean subspaces, also called Gilbert graphs, are widely used to model spatially embedded networks across various domains. In such graphs, nodes are located at random in Euclidean space, and any two nodes are connected by an edge if they lie within a certain distance threshold. Accurately estimating rare-event probabilities related to key properties of these graphs, such as the number of edges and the size of the largest connected component, is important in the assessment of risk associated with catastrophic incidents, for example. However, this task is computationally challenging, especially for large networks. Importance sampling offers a viable solution by concentrating computational efforts on significant regions of the graph. This paper explores the application of an importance sampling method to estimate rare-event probabilities, highlighting its advantages in reducing variance and enhancing accuracy. Through asymptotic analysis and numerical studies, we demonstrate the effectiveness of our methodology, contributing to improved analysis of Gilbert graphs and showcasing the broader applicability of importance sampling in complex network analysis.

math.PR

Quantitative characterization of hydrophobic agglomeration at different mixing intensities using a copula-based probabilistic modeling approach

The agglomeration of small poorly wetted alumina particles in a stirred tank is investigated. For different experimental conditions, two bivariate probability densities for the area-equivalent diameter and aspect ratio of primary particles and agglomerates, respectively, are determined, using 2D image data from an inline camera system. Throughout each experiment, these densities do not change since the geometries of primary particles are unaffected by the experimental conditions, while large agglomerates fragment into multiple smaller ones, which results in an equilibrium state regarding the distribution of agglomerate descriptors. Mixtures of these densities are used to model the contents of the stirred tank at each time step of the experiments. Analytical functions, whose parameters characterize the agglomeration dynamics, are fitted to the time-dependent weights of these mixtures. This enables a quantitative comparison of agglomeration processes, highlighting the impact of mixing intensity on the joint distribution of agglomerate descriptors.

cond-mat.soft

Statistical learning of structure-property relationships for transport in porous media, using hybrid AI modeling

The 3D microstructure of porous media, such as electrodes in lithium-ion batteries or fiber-based materials, significantly impacts the resulting macroscopic properties, including effective diffusivity or permeability. Consequently, quantitative structure-property relationships, which link structural descriptors of 3D microstructures such as porosity or geodesic tortuosity to effective transport properties, are crucial for further optimizing the performance of porous media. To overcome the limitations of 3D imaging, parametric stochastic 3D microstructure modeling is a powerful tool to generate many virtual but realistic structures at the cost of computer simulations. The present paper uses 90,000 virtually generated 3D microstructures of porous media derived from literature by systematically varying parameters of stochastic 3D microstructure models. Previously, this data set has been used to establish quantitative microstructure-property relationships. The present paper extends these findings by applying a hybrid AI framework to this data set. More precisely, symbolic regression, powered by deep neural networks, genetic algorithms, and graph attention networks, is used to derive precise and robust analytical equations. These equations model the relationships between structural descriptors and effective transport properties without requiring manual specification of the underlying functional relationship. By integrating AI with traditional computational methods, the hybrid AI framework not only generates predictive equations but also enhances conventional modeling approaches by capturing relationships influenced by specific microstructural features traditionally underrepresented. Thus, this paper significantly advances the predictive modeling capabilities in materials science, offering vital insights for designing and optimizing new materials with tailored transport properties.

cond-mat.mtrl-sci

Stochastic modeling of particle structures in spray fluidized bed agglomeration using methods from machine learning

Agglomeration is an industrially relevant process for the production of bulk materials in which the product properties depend on the morphology of the agglomerates, e.g., on the distribution of size and shape descriptors. Thus, accurate characterization and control of agglomerate morphologies is essential to ensure high and consistent product quality. This paper presents a pipeline for image-based inline agglomerate characterization and prediction of their time-dependent multivariate morphology distributions within a spray fluidized bed process with transparent glass beads as primary particles. The framework classifies observed objects in image data into three distinct morphological classes--primary particles, chain-like agglomerates and raspberry-like agglomerates--using various size and shape descriptors. To this end, a fast and robust random forest classifier is trained. Additionally, the fraction of primary particles belonging to each of these classes, either as individual primary particles or as part of a larger structure in the form of chain-like or raspberry-like agglomerates, is described using parametric regression functions. Finally, the temporal evolution of bivariate size and shape descriptor distributions of these classes is modeled using low-parametric regression functions and Archimedean copulas. This approach improves the understanding of agglomerate formation and allows the prediction of process kinetics, facilitating precise control over class fractions and morphology distributions.

stat.AP

Generative adversarial framework to calibrate excursion set models for the 3D morphology of all-solid-state battery cathodes

This paper presents a computational method for generating virtual 3D morphologies of functional materials using low-parametric stochastic geometry models, i.e., digital twins, calibrated with 2D microscopy images. These digital twins allow systematic parameter variations to simulate various morphologies, that can be deployed for virtual materials testing by means of spatially resolved numerical simulations of macroscopic properties. Generative adversarial networks (GANs) have gained popularity for calibrating models to generate realistic 3D morphologies. However, GANs often comprise of numerous uninterpretable parameters make systematic variation of morphologies for virtual materials testing challenging. In contrast, low-parametric stochastic geometry models (e.g., based on Gaussian random fields) enable targeted variation but may struggle to mimic complex morphologies. Combining GANs with advanced stochastic geometry models (e.g., excursion sets of more general random fields) addresses these limitations, allowing model calibration solely from 2D image data. This approach is demonstrated by generating a digital twin of all-solid-state battery (ASSB) cathodes. Since the digital twins are parametric, they support systematic exploration of structural scenarios and their macroscopic properties. The proposed method facilitates simulation studies for optimizing 3D morphologies, benefiting not only ASSB cathodes but also other materials with similar structures.

stat.ML

Stereological 3D modeling of nano-scale catalyst particles using TEM projections

Catalysis, particularly heterogeneous catalysis, is crucial in the chemical industry and energy storage. Approximately 80% of all chemical products produced by heterogeneous catalysis are produced by solid catalysts, which are essential for the synthesizing of ammonia, methanol, and hydrocarbons. Despite extensive use, challenges in catalyst development remain, including enhancing selectivity, stability, and activity. These effective properties are influenced by the nanoscale morphology of the catalysts, whereby the size of the nanoparticles is only one key descriptor. To investigate the relationship between nanoparticle morphology and catalytic performance, a comprehensive 3D analysis of nano-scale catalyst particles is necessary. However, traditional imaging techniques for a representative recording of this size range, such as transmission electron microscopy (TEM), are mostly limited to 2D. Thus, in the present paper, a stochastic 3D model is developed for a data-driven analysis of the nanostructure of catalyst particles. The calibration of this model is achieved using 2D TEM data from two different length scales, allowing for a statistically representative 3D modeling of catalyst particles. Furthermore, digital twins of catalyst particles can be drawn for the stochastic 3D model for virtual materials testing, enhancing the understanding of the relationship between catalyst nanostructure and performance.

cond-mat.mtrl-sci

Comparing the 3D morphology of solid-oxide fuel cell anodes for different manufacturing processes, annealing times, and operating temperatures

Solid oxide fuel cells (SOFCs) are becoming increasingly important due to their high electrical efficiency, the flexible choice of fuels and relatively low emissions of pollutants. However, the increasingly growing demands for electrochemical devices require further performance improvements. Since it is well known that the 3D morphology of the electrodes, which is significantly influenced by the underlying manufacturing process, has a profound impact on the resulting performance, a deeper understanding for the structural changes caused by modifications of the manufacturing process or degradation phenomena is desirable. In the present paper, we investigate the influence of the annealing time and the operating temperature on the 3D morphology of SOFC anodes using 3D image data obtained by focused-ion beam scanning electron microscopy, which is segmented into gadolinium-doped ceria, nickel and pore space. In addition, structural differences caused by manufacturing the anode via infiltration or powder technology, respectively, are analyzed quantitatively by means of various geometrical descriptors such as specific surface area, length of triple phase boundary per unit volume, mean geodesic tortuosity, and constrictivity. The computation of these descriptors from 3D image data is carried out both globally as well as locally to quantify the heterogeneity of the anode structure.

cond-mat.mtrl-sci

Stochastic 3D reconstruction of cracked polycrystalline NMC particles using 2D SEM data

Li-ion battery performance is strongly influenced by their cathodes' properties and consequently by the 3D microstructure of the particles the cathodes are comprised of. During calendaring and cycling, cracks develop within cathode particles, which may affect performance in multiple ways. On the one hand, cracks reduce internal connectivity such that electron transport within cathode particles is hindered. On the other hand, intra-particle cracks can increase the cathode reactive surface. Due to these contradictory effects, it is necessary to quantitatively investigate how battery cycling effects cracking and how cracking in-turn influences battery performance. Thus, it is necessary to characterize the 3D particle morphology with structural descriptors and quantitatively correlate them with effective battery properties. Typically, 3D structural characterization is performed using image data. However, informative 3D imaging techniques are time-consuming, costly and rarely available, such that analyses often have to rely on 2D image data. This paper presents a novel stereological approach for generating virtual 3D cathode particles that exhibit crack networks that are statistically equivalent to those observed in 2D sections of experimentally measured particles. Consequently, more easily available 2D image data suffices for deriving a full 3D characterization of cracked cathodes particles. In future research, the virtually generated 3D particles will be used as geometry input for spatially resolved electro-chemo-mechanical simulations, to enhance our understanding of structure-property relationships of cathodes in Li-ion batteries.

cond-mat.mtrl-sci

Data-driven stochastic 3D modeling of the nanoporous binder-conductive additive phase in battery cathodes

A stochastic 3D modeling approach for the nanoporous binder-conductive additive phase in hierarchically structured cathodes of lithium-ion batteries is presented. The binder-conductive additive phase of these electrodes consists of carbon black, polyvinylidene difluoride binder and graphite particles. For its stochastic 3D modeling, a three-step procedure based on methods from stochastic geometry is used. First, the graphite particles are described by a Boolean model with ellipsoidal grains. Second, the mixture of carbon black and binder is modeled by an excursion set of a Gaussian random field in the complement of the graphite particles. Third, large pore regions within the mixture of carbon black and binder are described by a Boolean model with spherical grains. The model parameters are calibrated to 3D image data of cathodes in lithium-ion batteries acquired by focused ion beam scanning electron microscopy. Subsequently, model validation is performed by comparing model realizations with measured image data in terms of various morphological descriptors that are not used for model fitting. Finally, we use the stochastic 3D model for predictive simulations, where we generate virtual, yet realistic, image data of nanoporous binder-conductive additives with varying amounts of graphite particles. Based on these virtual nanostructures, we can investigate structure-property relationships. In particular, we quantitatively study the influence of graphite particles on effective transport properties in the nanoporous binder-conductive additive phase, which have a crucial impact on electrochemical processes in the cathode and thus on the performance of battery cells.

cond-mat.mtrl-sci

A length-scale insensitive cohesive phase-field interface model: application to concurrent bulk and interface fracture simulation in Lithium-ion battery materials

A new cohesive phase-field (CPF) interface fracture model is proposed on the basis of the Euler-Lagrange equation of the phase-field theory and the interface fracture energy check w.r.t. that of the cohesive zone model. It employs an exponential function for the interpolation of fracture energy between the bulk phase and the interface, while the effective interface fracture energy $\tilde{G}_i$ is derived in such a way that the integrated phase-field fracture energy across the diffusive interface region remains consistent with the sharp interface fracture energy $G_i$ defined in the classical cohesive zone model. This consistency is the key to ensure that the numerical results remain insensitive to the choice of length-scale parameters, particularly the regularized interface thickness $L$ and the regularized fracture surface thickness $b$. By employing this energy consistency check, various CPF interface models in the literature are reviewed. Besides the length-scale insensitivity, the proposed CPF interface model offers further advantages. Thanks to the fact that the exponential interpolation function can be obtained conveniently from the relaxation solution of an Allen-Cahn equation, the proposed CPF model is advantageous over other models with high flexibility in handling structures containing complicated interface topology. In order to demonstrate this merit and to check the length-scale insensitivity in multiphysics context, the proposed CPF interface model is employed further to derive a thermodynamically consistent chemo-mechanical model relevant to Lithium-ion battery materials. Finite element simulation results of the concurrent bulk and interface fracture in polycrystalline electrode particles, reconstructed from images with segmented interfaces, confirm the expected computational advantages and the length-scale insensitivity in chemo-mechanical context.

cond-mat.mtrl-sci

Generating multi-scale NMC particles with radial grain architectures using spatial stochastics and GANs

Understanding structure-property relationships of Li-ion battery cathodes is crucial for optimizing rate-performance and cycle-life resilience. However, correlating the morphology of cathode particles, such as in NMC811, and their inner grain architecture with electrode performance is challenging, particularly, due to the significant length-scale difference between grain and particle sizes. Experimentally, it is currently not feasible to image such a high number of particles with full granular detail to achieve representivity. A second challenge is that sufficiently high-resolution 3D imaging techniques remain expensive and are sparsely available at research institutions. To address these challenges, a stereological generative adversarial network (GAN)-based model fitting approach is presented that can generate representative 3D information from 2D data, enabling characterization of materials in 3D using cost-effective 2D data. Once calibrated, this multi-scale model is able to rapidly generate virtual cathode particles that are statistically similar to experimental data, and thus is suitable for virtual characterization and materials testing through numerical simulations. A large dataset of simulated particles with inner grain architecture has been made publicly available.

physics.app-ph

Generating Synthetic Rainfall Fields by R-vine Copulas Applied to Seamless Probabilistic Predictions

Many post-processing methods improve forecasts at individual locations but remove their correlation structure, which is crucial for predicting larger-scale events like total precipitation amount over areas such as river catchments that are relevant for weather warnings and flood predictions. We propose a method to reintroduce spatial correlation into a post-processed forecast using an R-vine copula fitted to historical observations. This method works similarly to related approaches like the Schaake shuffle and ensemble copula coupling, i.e., by rearranging predictions at individual locations and reintroducing spatial correlation while maintaining the post-processed marginal distribution. Here, the copula measures how well an arrangement compares with the historical distribution of precipitation. No close relationship is needed between the post-processed marginal distributions and the spatial correlation source. This is an advantage compared to Schaake shuffle and ensemble copula coupling, which rely on a ranking with no ties at each considered location in their source for spatial correlations. However, weather variables such as the precipitation amount, whose distribution has an atom at zero, have rankings with ties. To evaluate the proposed method, it is applied to a precipitation forecast produced by a combination model with two input forecasts that deliver calibrated marginal distributions but without spatial correlations. The obtained results indicate that the calibration of the combination model carries over to the output of the proposed model, i.e., the evaluation of area predictions shows a similar improvement in forecast quality as the predictions for individual locations. Additionally, the spatial correlation of the forecast is evaluated with the help of object-based metrics, for which the proposed model also shows an improvement compared to both input forecasts.

stat.ME

Effect of crystallographic twins on the elastoplastic response of polycrystals

We investigate the influence of crystallographic twins on the elastoplastic response of $\gamma$-TiAl intermetallics via full-field FFT-based computations. We first introduce a hierarchical stochastic model, which is used to simulate synthetic polycrystalline microstructures containing twin grains with certain morphologies, and apply it to generate representative volume elements. Second, we develop a Fourier-based method with regularization for solving the effective and local mechanical response of polycrystalline media using the M\'eric-Cailletaud crystal plasticity constitutive law. Numerical results show that, across configurations of twinning, the corresponding average effective response is similar. Although differences were quantified, the effect of twins on the yield stress is negligible in practice (less than $1\%$).

cond-mat.mtrl-sci