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W. Wenzel

Publications and source records attributed to W. Wenzel.

17 recordsLinked to original sources

The Interoperability Challenge in DFT Workflows Across Implementations

Interoperability and cross-validation remains a significant challenge in the computational materials discovery community. In this context, we introduce a common input/output standard designed for internal translation by various workflow managers (AiiDA, PerQueue, Pipeline Pilot, and SimStack) to produce results in a unified schema. This standard aims to enable engine-agnostic workflow execution across multiple density functional theory (DFT) codes, including CASTEP, GPAW, Quantum ESPRESSO, and VASP. As a demonstration, we have implemented a workflow to calculate the open-circuit voltage across several battery cathode materials using the proposed universal input/output schema. We analyze and resolve the challenges of reconciling energetics computed by different DFT engines and document the code-specific idiosyncrasies that make straightforward comparisons difficult. Motivated by these challenges, we outline general design principles for robust automated DFT workflows. This work represents a practical step towards more reproducible and interoperable workflows for high-throughput materials screening, while highlighting challenges of aligning electronic properties, especially for non-pristine structures.

cond-mat.mtrl-sci

Influence of structural disorder and large-scale geometric fluctuations on the Coherent Transport of Metallic Junctions and Molecular Wires

Structural disorder is present in almost all experimental measurements of electronic transport through single molecules or molecular wires. To assess its influence on the conductance is computationally demanding, because a large number of conformations must be considered. Here we analyze an approximate recursive layer Green function approach for the ballistic transport through quasi one-dimensional nano-junctions. We find a rapid convergence of the method with its control parameter, the layer thickness, and good agreement with existing experimental and theoretical data. Because the computational effort rises only linearly with system size, this method permits treatment of very large systems. We investigate the conductance of gold- and silver wires of different sizes and conformations. For weak electrode disorder and imperfect coupling between electrode and wire we find conductance variations of approximately 20%. Overall we find the conductance of silver junctions well described by the immediate vicinity of narrowest point in the junction, a result that may explain the observation of well-conserved conductance plateaus in recent experiments on silver junctions. In an application to flexible oligophene wires, we find that strongly distorted conformations that are sterically forbidden at zero temperature, contribute significantly to the observed average zero-bias conductance of the molecular wire.

cond-mat.mes-hall

Independently switchable atomic quantum transistors by reversible contact reconstruction

The controlled fabrication of actively switchable atomic-scale devices, in particular transistors, has remained elusive to date. Here we explain operation of an atomic-scale three-terminal device by a novel switching mechanism of bistable, self-stabilizing reconstruction of the electrode contacts at the atomic level: While the device is manufactured by electrochemical deposition, it operates entirely on the basis of mechanical effects of the solid-liquid interface. We analyze mechanically and thermally stable metallic junctions with a predefined quantized conductance of 1-5 G_0 in experiment and atomistic simulation. Atomistic modeling of structural and conductance properties elucidates bistable electrode reconstruction as the underlying mechanism of the device. Independent room-temperature operation of two transistors at low voltage demonstrates intriguing perspectives for quantum electronics and logics on the atomic scale.

cond-mat.mes-hall

Pre-selectable integer quantum conductance of electrochemically fabricated silver point contacts

The controlled fabrication of well-ordered atomic-scale metallic contacts is of great interest: it is expected that the experimentally observed high percentage of point contacts with a conductance at non-integer multiples of the conductance quantum G_0 = 2e^2/h in simple metals is correlated to defects resulting from the fabrication process. Here we demonstrate a combined electrochemical deposition and annealing method which allows the controlled fabrication of point contacts with pre-selectable integer quantum conductance. The resulting conductance measurements on silver point contacts are compared with tight-binding-like conductance calculations of modeled idealized junction geometries between two silver crystals with a predefined number of contact atoms.

cond-mat.mes-hall

Charge-induced maximal spin states of a polynuclear transition-metal complex

We theoretically investigate the ground state spin of a polynuclear transition-metal complex as a function of the number of added electrons taking into account strong electron correlations. Our phenomenological model of the so-called [$2\times2$]-grid molecule incorporates the relevant electronic degrees of freedom on the four transition-metal centers (either Fe$^{2+}$ or Co$^{2+}$) and the four organic bridging ligands. Extra electrons preferably occupy redox orbitals on the ligands. Magnetic interactions between these ligands are mediated by transition-metal ions {\em and vice versa}. Using both perturbation theory and exact diagonalization we find that for certain charge states the maximally attainable total spin (either $S_{\mathsf{tot}}=3/2$ or $S_{\mathsf{tot}}=7/2$) may actually be achieved. Due to the Nagaoka mechanism, all unpaired electron spins couple to a total maximal spin, including unpaired electron spins on the metal-ions in the case of Co$^{2+}$. The parameters are chosen to be consistent with cyclovoltammetry experiments in which up to twelve redox states have been observed. The above effect may also be realized in other complexes with an appropriate connectivity between the redox sites. The maximal spin states of such a charge-switchable molecular magnet may be experimentally observed as spin-blockade effects on the electron tunneling in a three-terminal transport setup.

cond-mat.str-el

In-silico folding of a three helix protein and characterization of its free-energy landscape in an all-atom forcefield

We report the reproducible first-principles folding of the 40 amino acid, three-helix headpiece of the HIV accessory protein in a recently developed all-atom free-energy forcefield. Six of twenty simulations using an adapted basin-hopping method converged to better than 3 Åbackbone RMS deviation to the experimental structure. Using over 60,000 low-energy conformations of this protein, we constructed a decoy tree that completely characterizes its folding funnel.

physics.bio-ph

Conductance of a hydrogen molecule

Recently Smit et al. [Nature 419, 906 (2002)] have reported that a single hydrogen molecule can form a bridge between Pt electrodes, which has a conductance close to one quantum unit, carried by a single channel. We present density functional calculations explaining these experimental findings. We show that the symmetry of the molecular orbitals selects a single conduction channel. The transmission of this channel is close to unity due to a combination of the charge transfer between hydrogen and the Pt contacts and the strong hybridization between the bonding state of the molecule and the d-band of the Pt leads.

cond-mat.mes-hall

A new two-pole accretion polar: RX J1846.9+5538

We report the discovery of a new, bright (V = 17 mag) AM Her system as the optical counterpart of the soft ROSAT All-Sky-Survey source RX J1846.9+5538 (= 1RXS J184659.4+553834). Optical photometric and spectroscopic follow-up observations reveal a single period of 128.7 min, consistent with a high degree of spin-orbit synchronization, and a low polar field strength ($B<20$ MG) of the primary accretion region. The system was observed in optical intermediate and high states that differ by about 1 mag. These brightness variations were accompanied by a correlated change of the optical light curve, which we interpret as a switch between one- and two-pole accretion. This explanation is also supported by the X-ray light curves, which at two different epochs display emission from two equally bright accretion regions separated by 160 degrees. Both spots possess distinct spectral X-ray properties as seen from the X-ray hardness ratio, where the secondary accretion region appears significantly softer, thus probably indicating a higher field strength compared to the primary region. In all ROSAT pointings a deep dip is present during the primary flux maxima, very likely caused by absorption in one of the accretion streams.

astro-ph

Current collapse in tunneling transport through benzene

We investigate the electrical transport through a system of benzene coupled to metal electrodes by electron tunneling. Using electronic structure calculations, a semi--quantitative model for the pi-electrons of the benzene is derived that includes general two-body interactions. After exact diagonalization of the benzene model the transport is computed using perturbation theory for weak electrode-benzene coupling (golden rule approximation). We include the effect of an applied electric field on the molecular states, as well as radiative relaxation. We predict a current collapse and strong negative differential conductance due to a ``blocking'' state when the electrode is coupled to the para-position of benzene. In contrast, for coupling to the meta-position, a series of steps in the I-V curve is found.

cond-mat.mes-hall

Disorder Induced Quantum Phase Transition in Random-Exchange Spin-1/2 Chains

We investigate the effect of quenched bond-disorder on the anisotropic spin-1/2 (XXZ) chain as a model for disorder induced quantum phase transitions. We find non-universal behavior of the average correlation functions for weak disorder, followed by a quantum phase transition into a strongly disordered phase with only short-range xy-correlations. We find no evidence for the universal strong-disorder fixed point predicted by the real-space renormalization group, suggesting a qualitatively different view of the relationship between quantum fluctuations and disorder.

cond-mat.dis-nn

Electrical transport through single-molecule junctions: from molecular orbitals to conduction channels

We present an atomistic theory of electronic transport through single organic molecules that reproduces the important features of the current-voltage characteristics observed in recent experiments. We trace these features to their origin in the electronic structure of the molecules and their local atomic environment. We demonstrate how conduction channels arise from the molecular orbitals and elucidate which specific properties of the individual orbitals determine their contribution to the current.

cond-mat.mes-hall

A Stochastic Tunneling Approach for Global Minimization of Complex Potential Energy Landscapes

We investigate a novel stochastic technique for the global optimization of complex potential energy surfaces (PES) that avoids the freezing problem of simulated annealing by allowing the dynamical process to tunnel energetically inaccessible regions of the PES by way of a dynamically adjusted nonlinear transformation of the original PES. We demonstrate the success of this approach, which is characterized by a single adjustable parameter, for three generic hard minimization problems.

physics.comp-ph

Structure of the Hilbert-space of the infinite-dimensional Hubbard model

An iterative procedure for the explicit construction of the nontrivial subspace of all symmetry-adapted configurations with non-zero weight in the ground-state of the infinite-dimensional Hubbard model is developed on the basis of a symmetrized representation of the transition operators on a sequence of Bethe-Lattices of finite depth. The relation ship between these operators and the well known mapping of the infinite-dimensional Hubbard model onto an effective impurity problem coupled to a (self-consistent) bath on non-interacting electrons is given. As an application we calculate the properties of various Hubbard stars and give estimates for the half-filled Hubbard model with up to 0.1% accuracy.

cond-mat.str-el

The Scaling Behaviour of Stochastic Minimization Algorithms in a Perfect Funnel Landscape

We determined scaling laws for the numerical effort to find the optimal configurations of a simple model potential energy surface (PES) with a perfect funnel structure that reflects key characteristics of the protein interactions. Generalized Monte-Carlo methods(MCM, STUN) avoid an enumerative search of the PES and thus provide a natural resolution of the Levinthal paradox. We find that the computational effort grows with approximately the eighth power of the system size for MCM and STUN, while a genetic algorithm was found to scale exponentially. The scaling behaviour of a derived lattice model is also rationalized.

physics.bio-ph

Magnon-magnon interactions in the Spin-Peierls compound CuGeO_3

In a magnetic substance the gap in the Raman spectrum, Delta_R, is approximatively twice the value of the neutron scattering gap, Delta_S, if the the magnetic excitations (magnons) are only weakly interacting. But for CuGeO_3 the experimentally observed ratio Delta_R/Delta_S is approximatively 1.49-1.78, indicating attractive magnon-magnon interactions in the quasi-1D Spin-Peierls compound CuGe_3. We present numerical estimates for Delta_R/Delta_S from exact diagonalization studies for finite chains and find agreement with experiment for intermediate values of the frustration parameter alpha. An analysis of the numerical Raman intensity leads us to postulate a continuum of two-magnon bound states in the Spin-Peierls phase. We discuss in detail the numerical method used, the dependence of the results on the model parameters and a novel matrix-element effect due to the dimerization of the Raman-operator in the Spin-Peierls phase.

cond-mat.str-el

The transition from an ordered antiferromagnet to a quantum disordered spin liquid in a solvable bilayer model

We present a spin-1/2 bilayer model for the quantum order-disorder transition which (i) can be solved by mean-field theory for bulk quantities, (ii) becomes critical at the transition, and (iii) allows to include intralayer frustration. We present numerical data (for systems with up to 240 sites) and analytical results for the critical coupling strength, ground-state energy, order parameter and for the gap. We show that the critical coupling decreases linearly with frustration.

cond-mat

Optical variability of the supersoft source RX~J0019.8+2156

We present a 100 yr optical lightcurve of the recently discovered supersoft X-ray source RX~J0019.8+2156 as deduced from photographic plates of Harvard and Sonneberg Observatory. Apart from the periodic orbital variations two different timescales of optical variability are discovered. The timescales and amplitudes of this variability are discussed in the framework of the steady nuclear burning model.

astro-ph