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Walid G. Aref

Publications and source records attributed to Walid G. Aref.

38 records · Page 3Linked to original sources

Spatial Queries with Two kNN Predicates

The widespread use of location-aware devices has led to countless location-based services in which a user query can be arbitrarily complex, i.e., one that embeds multiple spatial selection and join predicates. Amongst these predicates, the k-Nearest-Neighbor (kNN) predicate stands as one of the most important and widely used predicates. Unlike related research, this paper goes beyond the optimization of queries with single kNN predicates, and shows how queries with two kNN predicates can be optimized. In particular, the paper addresses the optimization of queries with: (i) two kNN-select predicates, (ii) two kNN-join predicates, and (iii) one kNN-join predicate and one kNN-select predicate. For each type of queries, conceptually correct query evaluation plans (QEPs) and new algorithms that optimize the query execution time are presented. Experimental results demonstrate that the proposed algorithms outperform the conceptually correct QEPs by orders of magnitude.

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bdbms -- A Database Management System for Biological Data

Biologists are increasingly using databases for storing and managing their data. Biological databases typically consist of a mixture of raw data, metadata, sequences, annotations, and related data obtained from various sources. Current database technology lacks several functionalities that are needed by biological databases. In this paper, we introduce bdbms, an extensible prototype database management system for supporting biological data. bdbms extends the functionalities of current DBMSs to include: (1) Annotation and provenance management including storage, indexing, manipulation, and querying of annotation and provenance as first class objects in bdbms, (2) Local dependency tracking to track the dependencies and derivations among data items, (3) Update authorization to support data curation via content-based authorization, in contrast to identity-based authorization, and (4) New access methods and their supporting operators that support pattern matching on various types of compressed biological data types. This paper presents the design of bdbms along with the techniques proposed to support these functionalities including an extension to SQL. We also outline some open issues in building bdbms.

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