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Weidi Xie

Publications and source records attributed to Weidi Xie.

At least 109 records · Page 6Linked to original sources
arXiv2023

Can GPT-4V(ision) Serve Medical Applications? Case Studies on GPT-4V for Multimodal Medical Diagnosis

Driven by the large foundation models, the development of artificial intelligence has witnessed tremendous progress lately, leading to a surge of general interest from the public. In this study, we aim to assess the performance of OpenAI's newest model, GPT-4V(ision), specifically in the realm of multimodal medical diagnosis. Our evaluation encompasses 17 human body systems, including Central Nervous System, Head and Neck, Cardiac, Chest, Hematology, Hepatobiliary, Gastrointestinal, Urogenital, Gynecology, Obstetrics, Breast, Musculoskeletal, Spine, Vascular, Oncology, Trauma, Pediatrics, with images taken from 8 modalities used in daily clinic routine, e.g., X-ray, Computed Tomography (CT), Magnetic Resonance Imaging (MRI), Positron Emission Tomography (PET), Digital Subtraction Angiography (DSA), Mammography, Ultrasound, and Pathology. We probe the GPT-4V's ability on multiple clinical tasks with or without patent history provided, including imaging modality and anatomy recognition, disease diagnosis, report generation, disease localisation. Our observation shows that, while GPT-4V demonstrates proficiency in distinguishing between medical image modalities and anatomy, it faces significant challenges in disease diagnosis and generating comprehensive reports. These findings underscore that while large multimodal models have made significant advancements in computer vision and natural language processing, it remains far from being used to effectively support real-world medical applications and clinical decision-making. All images used in this report can be found in https://github.com/chaoyi-wu/GPT-4V_Medical_Evaluation.

cs.CV↗
arXiv2023

Diagnosing Human-object Interaction Detectors

We have witnessed significant progress in human-object interaction (HOI) detection. The reliance on mAP (mean Average Precision) scores as a summary metric, however, does not provide sufficient insight into the nuances of model performance (e.g., why one model is better than another), which can hinder further innovation in this field. To address this issue, in this paper, we introduce a diagnosis toolbox to provide detailed quantitative break-down analysis of HOI detection models, inspired by the success of object detection diagnosis toolboxes. We first conduct holistic investigations in the pipeline of HOI detection. By defining a set of errors and the oracles to fix each of them, we can have a quantitative analysis of the significance of different errors according to the mAP improvement obtained from fixing each error. We then delve into two sub-tasks of HOI detection: human-object pair detection and interaction classification, respectively. For the first detection task, we compute the coverage of ground-truth human-object pairs as well as the noisiness level in the detection results. For the second classification task, we measure a model's performance of differentiating positive and negative detection results and also classifying the actual interactions when the human-object pairs are correctly detected. We analyze eight state-of-the-art HOI detection models and provide valuable diagnosis insights to foster future research. For instance, our diagnosis shows that state-of-the-art model RLIPv2 outperforms others mainly because it significantly improves the multi-label interaction classification accuracy. Our toolbox is applicable for different methods across different datasets and available at https://github.com/neu-vi/Diag-HOI.

cs.CV↗
arXiv2023

Towards Generalist Foundation Model for Radiology by Leveraging Web-scale 2D&3D Medical Data

In this study, we aim to initiate the development of Radiology Foundation Model, termed as RadFM. We consider the construction of foundational models from three perspectives, namely, dataset construction, model design, and thorough evaluation. Our contribution can be concluded as follows: (i), we construct a large-scale Medical Multi-modal Dataset, MedMD, which consists of 16M 2D and 3D medical scans with high-quality text descriptions or reports across various data formats, modalities, and tasks, covering over 5000 distinct diseases. To the best of our knowledge, this is the first large-scale, high-quality, medical visual-language dataset, with both 2D and 3D scans; (ii), we propose an architecture that enables visually conditioned generative pre-training, i.e., allowing for integration of text input with 2D or 3D medical scans, and generate responses for diverse radiologic tasks. The model was initially pre-trained on MedMD and subsequently fine-tuned on the domain-specific dataset, which is a radiologic cleaned version of MedMD, containing 3M radiologic visual-language pairs, termed as RadMD; (iii), we propose a new evaluation benchmark, RadBench, that comprises five tasks, including modality recognition, disease diagnosis, visual question answering, report generation and rationale diagnosis, aiming to comprehensively assess the capability of foundation models in handling practical clinical problems. We conduct both automatic and human evaluation on RadBench, in both cases, RadFM outperforms existing multi-modal foundation models, that are publicaly accessible, including Openflamingo, MedFlamingo, MedVInT and GPT-4V. Additionally, we also adapt RadFM for different public benchmarks, surpassing existing SOTAs on diverse datasets. All codes, data, and model checkpoint will all be made publicly available to promote further research and development in the field.

cs.CV↗
arXiv2023

Joint-Relation Transformer for Multi-Person Motion Prediction

Multi-person motion prediction is a challenging problem due to the dependency of motion on both individual past movements and interactions with other people. Transformer-based methods have shown promising results on this task, but they miss the explicit relation representation between joints, such as skeleton structure and pairwise distance, which is crucial for accurate interaction modeling. In this paper, we propose the Joint-Relation Transformer, which utilizes relation information to enhance interaction modeling and improve future motion prediction. Our relation information contains the relative distance and the intra-/inter-person physical constraints. To fuse relation and joint information, we design a novel joint-relation fusion layer with relation-aware attention to update both features. Additionally, we supervise the relation information by forecasting future distance. Experiments show that our method achieves a 13.4% improvement of 900ms VIM on 3DPW-SoMoF/RC and 17.8%/12.0% improvement of 3s MPJPE on CMU-Mpcap/MuPoTS-3D dataset.

cs.CV↗
arXiv2023

AutoAD II: The Sequel -- Who, When, and What in Movie Audio Description

Audio Description (AD) is the task of generating descriptions of visual content, at suitable time intervals, for the benefit of visually impaired audiences. For movies, this presents notable challenges -- AD must occur only during existing pauses in dialogue, should refer to characters by name, and ought to aid understanding of the storyline as a whole. To this end, we develop a new model for automatically generating movie AD, given CLIP visual features of the frames, the cast list, and the temporal locations of the speech; addressing all three of the 'who', 'when', and 'what' questions: (i) who -- we introduce a character bank consisting of the character's name, the actor that played the part, and a CLIP feature of their face, for the principal cast of each movie, and demonstrate how this can be used to improve naming in the generated AD; (ii) when -- we investigate several models for determining whether an AD should be generated for a time interval or not, based on the visual content of the interval and its neighbours; and (iii) what -- we implement a new vision-language model for this task, that can ingest the proposals from the character bank, whilst conditioning on the visual features using cross-attention, and demonstrate how this improves over previous architectures for AD text generation in an apples-to-apples comparison.

cs.CV↗
arXiv2023

Self-supervised Object-Centric Learning for Videos

Unsupervised multi-object segmentation has shown impressive results on images by utilizing powerful semantics learned from self-supervised pretraining. An additional modality such as depth or motion is often used to facilitate the segmentation in video sequences. However, the performance improvements observed in synthetic sequences, which rely on the robustness of an additional cue, do not translate to more challenging real-world scenarios. In this paper, we propose the first fully unsupervised method for segmenting multiple objects in real-world sequences. Our object-centric learning framework spatially binds objects to slots on each frame and then relates these slots across frames. From these temporally-aware slots, the training objective is to reconstruct the middle frame in a high-level semantic feature space. We propose a masking strategy by dropping a significant portion of tokens in the feature space for efficiency and regularization. Additionally, we address over-clustering by merging slots based on similarity. Our method can successfully segment multiple instances of complex and high-variety classes in YouTube videos.

cs.CV↗
arXiv2023

Annotation-free Audio-Visual Segmentation

The objective of Audio-Visual Segmentation (AVS) is to localise the sounding objects within visual scenes by accurately predicting pixel-wise segmentation masks. To tackle the task, it involves a comprehensive consideration of both the data and model aspects. In this paper, first, we initiate a novel pipeline for generating artificial data for the AVS task without extra manual annotations. We leverage existing image segmentation and audio datasets and match the image-mask pairs with its corresponding audio samples using category labels in segmentation datasets, that allows us to effortlessly compose (image, audio, mask) triplets for training AVS models. The pipeline is annotation-free and scalable to cover a large number of categories. Additionally, we introduce a lightweight model SAMA-AVS which adapts the pre-trained segment anything model~(SAM) to the AVS task. By introducing only a small number of trainable parameters with adapters, the proposed model can effectively achieve adequate audio-visual fusion and interaction in the encoding stage with vast majority of parameters fixed. We conduct extensive experiments, and the results show our proposed model remarkably surpasses other competing methods. Moreover, by using the proposed model pretrained with our synthetic data, the performance on real AVSBench data is further improved, achieving 83.17 mIoU on S4 subset and 66.95 mIoU on MS3 set. The project page is https://jinxiang-liu.github.io/anno-free-AVS/.

cs.CV↗
arXiv2023

Boost Video Frame Interpolation via Motion Adaptation

Video frame interpolation (VFI) is a challenging task that aims to generate intermediate frames between two consecutive frames in a video. Existing learning-based VFI methods have achieved great success, but they still suffer from limited generalization ability due to the limited motion distribution of training datasets. In this paper, we propose a novel optimization-based VFI method that can adapt to unseen motions at test time. Our method is based on a cycle-consistency adaptation strategy that leverages the motion characteristics among video frames. We also introduce a lightweight adapter that can be inserted into the motion estimation module of existing pre-trained VFI models to improve the efficiency of adaptation. Extensive experiments on various benchmarks demonstrate that our method can boost the performance of two-frame VFI models, outperforming the existing state-of-the-art methods, even those that use extra input.

cs.CV↗
arXiv2023

UniBrain: Universal Brain MRI Diagnosis with Hierarchical Knowledge-enhanced Pre-training

Magnetic resonance imaging~(MRI) have played a crucial role in brain disease diagnosis, with which a range of computer-aided artificial intelligence methods have been proposed. However, the early explorations usually focus on the limited types of brain diseases in one study and train the model on the data in a small scale, yielding the bottleneck of generalization. Towards a more effective and scalable paradigm, we propose a hierarchical knowledge-enhanced pre-training framework for the universal brain MRI diagnosis, termed as UniBrain. Specifically, UniBrain leverages a large-scale dataset of 24,770 imaging-report pairs from routine diagnostics. Different from previous pre-training techniques for the unitary vision or textual feature, or with the brute-force alignment between vision and language information, we leverage the unique characteristic of report information in different granularity to build a hierarchical alignment mechanism, which strengthens the efficiency in feature learning. Our UniBrain is validated on three real world datasets with severe class imbalance and the public BraTS2019 dataset. It not only consistently outperforms all state-of-the-art diagnostic methods by a large margin and provides a superior grounding performance but also shows comparable performance compared to expert radiologists on certain disease types.

cs.CV↗
arXiv2023

The Making and Breaking of Camouflage

Not all camouflages are equally effective, as even a partially visible contour or a slight color difference can make the animal stand out and break its camouflage. In this paper, we address the question of what makes a camouflage successful, by proposing three scores for automatically assessing its effectiveness. In particular, we show that camouflage can be measured by the similarity between background and foreground features and boundary visibility. We use these camouflage scores to assess and compare all available camouflage datasets. We also incorporate the proposed camouflage score into a generative model as an auxiliary loss and show that effective camouflage images or videos can be synthesised in a scalable manner. The generated synthetic dataset is used to train a transformer-based model for segmenting camouflaged animals in videos. Experimentally, we demonstrate state-of-the-art camouflage breaking performance on the public MoCA-Mask benchmark.

cs.CV↗
arXiv2023

PMC-LLaMA: Towards Building Open-source Language Models for Medicine

Recently, Large Language Models (LLMs) have showcased remarkable capabilities in natural language understanding. While demonstrating proficiency in everyday conversations and question-answering situations, these models frequently struggle in domains that require precision, such as medical applications, due to their lack of domain-specific knowledge. In this paper, we describe the procedure for building a powerful, open-source language model specifically designed for medicine applications, termed as PMC-LLaMA. Our contributions are threefold: (i) we systematically investigate the process of adapting a general-purpose foundation language model towards medical domain, this involves data-centric knowledge injection through the integration of 4.8M biomedical academic papers and 30K medical textbooks, as well as comprehensive fine-tuning for alignment with domain-specific instructions; (ii) we contribute a large-scale, comprehensive dataset for instruction tuning. This dataset encompasses medical question-answering (QA), rationale for reasoning, and conversational dialogues, comprising a total of 202M tokens; (iii) we conduct thorough ablation studies to demonstrate the effectiveness of each proposed component. While evaluating on various public medical question-answering benchmarks, our lightweight PMCLLaMA, which consists of only 13 billion parameters, exhibits superior performance, even surpassing ChatGPT. All models, codes, datasets can be found in https://github.com/chaoyi-wu/PMC-LLaMA.

cs.CL↗
arXiv2023

Open-vocabulary Object Segmentation with Diffusion Models

The goal of this paper is to extract the visual-language correspondence from a pre-trained text-to-image diffusion model, in the form of segmentation map, i.e., simultaneously generating images and segmentation masks for the corresponding visual entities described in the text prompt. We make the following contributions: (i) we pair the existing Stable Diffusion model with a novel grounding module, that can be trained to align the visual and textual embedding space of the diffusion model with only a small number of object categories; (ii) we establish an automatic pipeline for constructing a dataset, that consists of {image, segmentation mask, text prompt} triplets, to train the proposed grounding module; (iii) we evaluate the performance of open-vocabulary grounding on images generated from the text-to-image diffusion model and show that the module can well segment the objects of categories beyond seen ones at training time; (iv) we adopt the augmented diffusion model to build a synthetic semantic segmentation dataset, and show that, training a standard segmentation model on such dataset demonstrates competitive performance on the zero-shot segmentation(ZS3) benchmark, which opens up new opportunities for adopting the powerful diffusion model for discriminative tasks.

cs.CV↗
arXiv2023

Towards Open-Vocabulary Video Instance Segmentation

Video Instance Segmentation (VIS) aims at segmenting and categorizing objects in videos from a closed set of training categories, lacking the generalization ability to handle novel categories in real-world videos. To address this limitation, we make the following three contributions. First, we introduce the novel task of Open-Vocabulary Video Instance Segmentation, which aims to simultaneously segment, track, and classify objects in videos from open-set categories, including novel categories unseen during training. Second, to benchmark Open-Vocabulary VIS, we collect a Large-Vocabulary Video Instance Segmentation dataset (LV-VIS), that contains well-annotated objects from 1,196 diverse categories, significantly surpassing the category size of existing datasets by more than one order of magnitude. Third, we propose an efficient Memory-Induced Transformer architecture, OV2Seg, to first achieve Open-Vocabulary VIS in an end-to-end manner with near real-time inference speed. Extensive experiments on LV-VIS and four existing VIS datasets demonstrate the strong zero-shot generalization ability of OV2Seg on novel categories. The dataset and code are released here https://github.com/haochenheheda/LVVIS.

cs.CV↗
arXiv2023

Knowledge-enhanced Visual-Language Pre-training on Chest Radiology Images

While multi-modal foundation models pre-trained on large-scale data have been successful in natural language understanding and vision recognition, their use in medical domains is still limited due to the fine-grained nature of medical tasks and the high demand for domain knowledge. To address this challenge, we propose a novel approach called Knowledge-enhanced Auto Diagnosis (KAD) which leverages existing medical domain knowledge to guide vision-language pre-training using paired chest X-rays and radiology reports. We evaluate KAD on {four} external X-ray datasets and demonstrate that its zero-shot performance is not only comparable to that of fully-supervised models, but also superior to the average of three expert radiologists for three (out of five) pathologies with statistical significance. Moreover, when few-shot annotation is available, KAD outperforms all existing approaches in fine-tuning settings, demonstrating its potential for application in different clinical scenarios.

cs.CV↗
arXiv2023

arXiVeri: Automatic table verification with GPT

Without accurate transcription of numerical data in scientific documents, a scientist cannot draw accurate conclusions. Unfortunately, the process of copying numerical data from one paper to another is prone to human error. In this paper, we propose to meet this challenge through the novel task of automatic table verification (AutoTV), in which the objective is to verify the accuracy of numerical data in tables by cross-referencing cited sources. To support this task, we propose a new benchmark, arXiVeri, which comprises tabular data drawn from open-access academic papers on arXiv. We introduce metrics to evaluate the performance of a table verifier in two key areas: (i) table matching, which aims to identify the source table in a cited document that corresponds to a target table, and (ii) cell matching, which aims to locate shared cells between a target and source table and identify their row and column indices accurately. By leveraging the flexible capabilities of modern large language models (LLMs), we propose simple baselines for table verification. Our findings highlight the complexity of this task, even for state-of-the-art LLMs like OpenAI's GPT-4. The code and benchmark will be made publicly available.

cs.CL↗
arXiv2023

Multi-Modal Classifiers for Open-Vocabulary Object Detection

The goal of this paper is open-vocabulary object detection (OVOD) $\unicode{x2013}$ building a model that can detect objects beyond the set of categories seen at training, thus enabling the user to specify categories of interest at inference without the need for model retraining. We adopt a standard two-stage object detector architecture, and explore three ways for specifying novel categories: via language descriptions, via image exemplars, or via a combination of the two. We make three contributions: first, we prompt a large language model (LLM) to generate informative language descriptions for object classes, and construct powerful text-based classifiers; second, we employ a visual aggregator on image exemplars that can ingest any number of images as input, forming vision-based classifiers; and third, we provide a simple method to fuse information from language descriptions and image exemplars, yielding a multi-modal classifier. When evaluating on the challenging LVIS open-vocabulary benchmark we demonstrate that: (i) our text-based classifiers outperform all previous OVOD works; (ii) our vision-based classifiers perform as well as text-based classifiers in prior work; (iii) using multi-modal classifiers perform better than either modality alone; and finally, (iv) our text-based and multi-modal classifiers yield better performance than a fully-supervised detector.

cs.CV↗
arXiv2023

CounTR: Transformer-based Generalised Visual Counting

In this paper, we consider the problem of generalised visual object counting, with the goal of developing a computational model for counting the number of objects from arbitrary semantic categories, using arbitrary number of "exemplars", i.e. zero-shot or few-shot counting. To this end, we make the following four contributions: (1) We introduce a novel transformer-based architecture for generalised visual object counting, termed as Counting Transformer (CounTR), which explicitly capture the similarity between image patches or with given "exemplars" with the attention mechanism;(2) We adopt a two-stage training regime, that first pre-trains the model with self-supervised learning, and followed by supervised fine-tuning;(3) We propose a simple, scalable pipeline for synthesizing training images with a large number of instances or that from different semantic categories, explicitly forcing the model to make use of the given "exemplars";(4) We conduct thorough ablation studies on the large-scale counting benchmark, e.g. FSC-147, and demonstrate state-of-the-art performance on both zero and few-shot settings.

cs.CV↗
arXiv2023

Zero-shot Unsupervised Transfer Instance Segmentation

Segmentation is a core computer vision competency, with applications spanning a broad range of scientifically and economically valuable domains. To date, however, the prohibitive cost of annotation has limited the deployment of flexible segmentation models. In this work, we propose Zero-shot Unsupervised Transfer Instance Segmentation (ZUTIS), a framework that aims to meet this challenge. The key strengths of ZUTIS are: (i) no requirement for instance-level or pixel-level annotations; (ii) an ability of zero-shot transfer, i.e., no assumption on access to a target data distribution; (iii) a unified framework for semantic and instance segmentations with solid performance on both tasks compared to state-of-the-art unsupervised methods. While comparing to previous work, we show ZUTIS achieves a gain of 2.2 mask AP on COCO-20K and 14.5 mIoU on ImageNet-S with 919 categories for instance and semantic segmentations, respectively. The code is made publicly available.

cs.CV↗