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Wenxuan Li

Publications and source records attributed to Wenxuan Li.

At least 19 recordsLinked to original sources

Multimodal Hierarchical Mixture-of-Experts for 3D Medical Vision-Language Modeling

Medical 3D scans and reports are inherently hierarchical, with diagnostic cues concentrated in specific anatomical regions across multiple levels of organization. Yet, most medical vision-language models ignore this structure and fail to focus on clinically relevant anatomy. We introduce MedHiVE, which combines hierarchical vision-language Soft Mixture-of-Experts (SMoE) with contrastive learning to jointly model fine-grained anatomy and global scan context. To our knowledge, MedHiVE is the first framework to route both vision and text tokens through a two-level SMoE hierarchy organized by anatomical scale, coupling this with report-derived anatomy-level contrastive alignment for 3D medical imaging. This replaces the direct region-text alignment of statically pooled features and vision-only hierarchical routing of prior work with dynamic, slot-based cross-modal information flow across anatomical scales. MedHiVE operates via a two-level, learnable token-routing mechanism, where local image and text features are first routed through a local SMoE and then fused by a global SMoE into unified multimodal representations. Contrastive learning aligns both anatomy-level and global vision-language representations in a unified space. Pre-trained on 25,000+ CT scans with anatomical supervision, MedHiVE consistently surpasses 11 state-of-the-art methods across 6 datasets on 3 tasks: segmentation, classification, and detection, demonstrating the importance of hierarchical modeling. The code for MedHiVE is at github.com/szczurek-lab/MedHiVE.

cs.CV↗

Realtime-Bench: Can Frontier Models Solve Real-time Interactive Problems?

Real-time interaction requires agents to perceive evolving environments and act under temporal constraints, yet existing evaluations of real-time streaming models focus on conversational quality and streaming perception, leaving effective action under strict temporal constraints untested. We introduce Realtime-Bench, a suite of carefully curated dynamic tasks where delayed actions directly affect success. Under Wall Clock, where environments advance according to actual inference latency, the best success rate reaches only 44% and the best Pass^3 is only 36%, demonstrating that real-time interaction remains challenging. To separate serving latency from models' real-time streaming capability, we compare Wall Clock with Paused Clock, which removes inference delays as an idealized reference, and introduce Token Clock, which advances simulated time according to generated token counts, testing temporal awareness independently of physical serving speed. We find that temporal costs limit success in evolving environments and that higher reasoning effort has mixed effects under time pressure, reflecting a trade-off between decision quality and timely execution. Based on these results, we discuss future directions for improving real-time multimodal models, including adaptive reasoning with temporal awareness and continuous perception and action.

cs.AI↗

Diagnostic Loss: Asymmetric Supervision for Radiology Report Generation

Automated radiology report generation requires models to do more than produce fluent clinical narratives: they must explicitly state supported diagnoses while avoiding unsupported ones. However, existing medical vision-language models (MedVLMs) are typically trained with token-level maximum likelihood objectives, which prioritize text agreement over diagnostically critical terms. As a result, models can miss key diagnoses and introduce wrong ones. We identify this as an objective misalignment between conventional language modeling and the asymmetric diagnostic requirements of radiology reporting. To encode these requirements, we introduce Diagnostic Loss (DLoss), a differentiable, architecture-agnostic objective that operates directly on decoder token probabilities. DLoss separately aggregates probability mass over vocabularies associated with diagnoses supported by the reference report and with unsupported alternatives. Using asymmetric pooling across token positions in the report, it encourages supported diagnoses to receive sufficient probability in at least one position while suppressing spurious probability spikes for unsupported diagnoses across all positions during training. The loss can be applied to existing 3D MedVLMs without modifying their vision backbones, language decoders, or inference procedures, and introduces no additional inference-time computation. We train and evaluate DLoss on 50,000 abdominal CT scans across several 3D MedVLM architectures on both in-distribution and out-of-distribution report-generation benchmarks. Across these settings, DLoss improves diagnostic faithfulness while maintaining competitive performance on conventional language-generation metrics, showing the value of asymmetric sequence-level supervision for radiology report generation. The code for DLoss is available at https://github.com/gmum/DLoss.

cs.CV↗

DART: Scaling a Shape Representation Across Anatomical Classes and Imaging Modalities

Current state-of-the-art segmentation models still produce anatomically implausible shapes, such as broken vessels and fragmented glands, on the structures that are hardest to segment. Learned shape representations capture what structures look like and can help correct these errors, but most cover a fixed set of anatomical classes. Extending this coverage across classes and imaging modalities is costly because it often requires new voxel-level annotations. We propose Diffusion for Anatomical Reshaping with Text (DART), which learns a shared shape representation from segmentation probabilities. It uses anatomical descriptions to correct these probabilities without receiving medical images. Across 13 public benchmarks, absolute Dice gains reach 31% for individual gallbladder cases in CT and 10% for individual prostate cases in MRI. Using existing segmentation predictions, we scale a single shape representation from 50 to 377 anatomical classes without new voxel-level annotations for correction training. The shared representation also corrects four lesion classes absent from training and transfers from CT to MRI without retraining. Corrected labels also improve segmentation models, raising one model's Dice from 57.1% to 67.5%. The same pipeline supports annotations for 45,000 CT scans. These results suggest that sharing shape information within and across classes can reduce the need for new voxel-level annotations when extending segmentation to more anatomical classes and imaging modalities. The model is available at https://huggingface.co/Koushik45/DART-Seg

cs.CV↗

ETH: Data-Balanced Heterogeneous Pipeline Parallelism for Training Large Models

Current heterogeneity-aware training systems for large models balance workloads by assigning unequal numbers of layers across pipeline stages, a strategy aimed at equalizing execution time through a unique pipeline configuration. However, this approach fails to address critical memory constraints and suffers from inherently coarse balancing granularity. In this paper, we propose Heterogeneous Pipeline Parallelism (HPP), a novel approach enabling efficient and fine-grained data balance across heterogeneous pipelines. To address HPP's key challenges, prohibitive search overhead for optimal configurations and high communication overhead from asymmetric All-Reduce, we design the ETH training system. ETH employs a hierarchical workload balance framework that jointly optimizes balance across heterogeneous pipelines and within individual pipeline stages. To mitigate asymmetric communication costs, ETH implements block-wise gradient aggregation. Furthermore, it integrates specialized optimizations that dramatically reduce HPP configuration search overhead. Evaluations demonstrate ETH achieves up to 2x training speedup while reducing configuration generation overhead by up to 56x compared to state-of-the-art systems. The code is available at https://github.com/YuMJie/ETH.

cs.DC↗

Merlin Plus: A Large-Scale, Multi-Cancer, Image-Mask-Report Dataset

Multi-cancer segmentation in computed tomography (CT) is fundamentally limited by the scarcity of tumor masks across different organs. We present Merlin Plus, the first large-scale CT dataset with radiologist-created tumor masks across 9 organs. Merlin Plus extends the Merlin dataset by adding 1,153 per-voxel tumor masks and longitudinal metadata. To create these tumor masks, we developed a report-based active-learning framework in which radiology reports identify tumor cases for annotation and support training of a tumor segmentation model. The model generates initial masks, which radiologists review and correct to produce the final masks, reducing annotation burden while maintaining high-quality annotations. Besides tumor masks, the longitudinal metadata in Merlin Plus enables temporal modeling of cancer progression. By directly addressing the major bottleneck of limited multi-cancer segmentation masks, Merlin Plus supports scalable multi-organ cancer detection, segmentation, and longitudinal analysis in CT. Dataset is available at: https://github.com/MrGiovanni/MerlinPlus

cs.CV↗

RT-Super: Learning Tumor Segmentation from Longitudinal Images and Reports

Multi-tumor segmentation is important for early cancer detection and allows radiologists to visualize, verify, and understand AI predictions. However, tumor segmentation masks are expensive, time-consuming, and unavailable for many tumor types in public data. Instead, hospitals have vast, readily available data that can guide segmentation: radiology reports, longitudinal images, and multi-phase images. We use this readily available data to substitute for tumor masks in training AI for tumor segmentation. To this end, we propose a new architecture, RT-Super. It has a teacher network, which analyzes the patient's longitudinal images and reports to create high-quality tumor masks. These masks train a student network, which sees a single image and no report. At inference, when longitudinal images and reports are unavailable, we use the student. RT-Super uses a new CNN-Transformer architecture and novel Consistency Losses that exploit tumor location consistency across longitudinal images. We train RT-Super to segment esophagus, uterus and spleen tumors, which have few or no public masks. Even without training masks, RT-Super can segment these tumors and surpass public AI models. Overall, we demonstrate that learning from longitudinal images, multi-phase images, and reports can overcome mask scarcity and advance multi-cancer detection and segmentation. Code: https://github.com/MrGiovanni/RT-Super

cs.CV↗

NV-Reason-CT: 3D Visual Language Model for CT Analysis

We present NV-Reason-CT, a generative vision--language model for chest and abdominal CT combining native 3D visual encoding with radiologist-guided reasoning. The model couples a native 3D vision transformer with a language model, passing all visual tokens and their explicit 3D coordinates into language decoding without further spatial token merging. This retains volumetric spatial information within the vision encoder and through the language model's positional encoding during joint processing with text. We train on a curated corpus of approximately 550,000 multimodal instruction examples from 70,111 unique CT image inputs, combining standardized reports, abnormality-focused and anatomy-specific questions, multi-turn interactions, and radiologist-authored reasoning from recorded and transcribed expert CT interpretations. Expert annotations provide direct supervision and guide additional report-grounded synthetic reasoning. End-to-end supervised fine-tuning (SFT) is followed by Group Relative Policy Optimization (GRPO), with verifiable rewards over chest and abdominal abnormality sets. The model supports abnormality classification, report generation, and interactive reasoning with reviewable observations, differential diagnoses, and uncertainty. Evaluation spans public CT benchmarks and a held-out NIH cohort. On CT-RATE, NV-Reason-CT achieves a macro-F1 of 0.614 and macro-AUROC of 0.871 without a task-specific classification head; generated reports achieve a report-derived macro-F1 of 0.592. In a preliminary study with expert radiologists, AI-assisted review received favorable confidence ratings and was associated with a 50% reduction in average reported interpretation and reporting time. We release the model and training code to support reproducible research on explainable AI for volumetric medical imaging.

cs.CV↗

LeCor: Learning to Be Corrected by Meta-Learned Test-Time Training for Interactive 3D Lung-Tumour Segmentation

Delineating lung tumours on computed tomography (CT) takes a considerable share of the time spent on radiotherapy planning, and a contour proposed by a model can be refined interactively by the clinician. Promptable foundation models such as SAM 3 support this workflow by writing each correction into a session memory that conditions the remaining slices, while the model weights stay fixed. On 690 test cases from five public CT cohorts, fine-tuning SAM 3 on lung tumours raises the Dice obtained from a single point prompt from 0.298 to 0.757, and seven rounds of corrections raise it further to 0.765, but under memory conditioning alone the accuracy on slices the annotator has not touched stops improving after six rounds. We therefore treat each correction as a training signal and propose LeCor, which performs test-time training on a small set of case adapters that are reset for every case and meta-learned such that a single gradient step driven by a click improves the slices that were not clicked. On the 133 test cases that span at least eight slices, LeCor raises the Dice reached after seven correction rounds from 0.787 with the fine-tuned model to 0.827, reduces the number of cases that never reach a Dice of 0.80 from 47 to 27, and reaches in three correction rounds the accuracy that the fine-tuned model attains in seven.

cs.CV↗

Report Supervision

Segmentation models can surpass radiologists, classification models, and vision-language models in tumor detection. Importantly, segmentation models outline tumors, allowing radiologists to better verify and trust the AI output. Their main limitation is the scarcity of tumor masks: creating one 3D tumor mask takes up to 30 minutes, so most public CT datasets contain only a few hundred masks, and even the largest private datasets contain only a couple of thousand. Tumor masks are not produced in clinical routine, but radiology reports are. Public datasets contain tens of thousands of CT-Report pairs, and hospitals contain hundreds of thousands. These reports describe tumors in detail, providing large-scale, informative training data. Here, we introduce Report Supervision (R-Super), a training framework that uses reports to directly supervise and improve tumor segmentation. R-Super introduces new loss functions that teach segmentation models to segment tumors that match report descriptions of tumor count, sizes, and locations. Reports are only used for training. We evaluated R-Super on kidney and pancreatic tumor segmentation, exploring diverse training data sizes, up to 41,418 CT-Report plus 3,488 pancreatic tumor CT-Mask pairs. On external validation, R-Super increased tumor detection F1-Score and segmentation DSC by up to +15% with respect to mask-only training. It also surpassed alternative methods such as CLIP and multi-task learning. Leveraging numerous readily available reports to supplement scarce masks, R-Super strongly improves AI performance when very few training masks are available (e.g., 50), and when many masks are available (e.g., 3,488), unlocking scale in tumor segmentation.

cs.CV↗

A data-driven stage-structured host-parasitoid model for optimizing Trichogramma interventions against soybean pod borer (Leguminivora glycinivorella) outbreaks

The soybean pod borer (Leguminivora glycinivorella) poses a severe threat to global soybean production.In this study, we developed a stage-structured host-parasitoid dynamic model that explicitly couples the holometabolous life cycle of the pest with the obligate egg-parasitism mechanism of Trichogramma wasps. Utilizing field monitoring data from Changchun, Jilin Province, key biological parameters were rigorously estimated via the Markov Chain Monte Carlo (MCMC) method.This calibration facilitated the establishment of a precise Economic Injury Level ($Q_{EIL}$) of 0.0389 individuals/$m^2$, based solely on the destructive larval stage. Through theoretical and numerical analyses of different intervention scenarios, we identified an optimal continuous release rate ($C^* = 2.645$) that efficiently suppresses the outbreak without causing wasteful parasitoid accumulation. Furthermore, simulations demonstrate that a 5-day impulsive release interval provides the optimal balance between strict pest suppression and field operational costs. This study bridges the gap between theoretical population dynamics and applied agricultural management, providing a directly applicable mathematical decision-making tool for the precise biological control of crop pests.

q-bio.PE↗

BenchX: Benchmarking AI Models for Cancer Detection and Localization with Demographic and Protocol Biases

Artificial intelligence (AI) has achieved remarkable success in medical imaging, but it is widely recognized that these models often perform inconsistently across real-world clinical settings. Such inconsistencies occur when patient demographics and imaging protocols vary, for example, in detecting small tumors, analyzing scans from different contrast phases, or evaluating patients of different ages or sexes. To quantify these inconsistencies, we develop a large-scale, open benchmark of 85,355 CT scans that systematically evaluates 12 tumor-detection AI models across tumor size, location, patient subgroup, and imaging protocol. We leverage large language models (LLMs) to extract and organize subgroup information from clinical data, which makes the analysis both scalable and reproducible. Our benchmark reveals that current state-of-the-art AI models, optimized for average accuracy, perform poorly in rare or underrepresented subgroups, such as young, female African Americans. However, collecting sufficient annotated data for these rare cases is often impractical. The benchmark provides a foundation for building more reliable and robust AI models for tumor detection and highlighting the need for rigorous, subgroup-level evaluation in medical imaging and computer vision. Datasets, code

cs.CV↗

DuMate-DeepResearch: An Auditable Multi-Agent System with Recursive Search and Rubric-Grounded Reasoning

Deep Research (DR) has emerged as a new agentic paradigm to tackle complex, open-ended research tasks, demanding systems that can iteratively frame problems, acquire evidence, verify sources, and synthesize long-form reports. In practice, however, current DR systems are constrained by four interrelated limitations: long-horizon planning over an underspecified scope, the bottleneck of decomposing and scheduling such tasks within a single agent, hallucination risk in long-form synthesis, and limited process auditability. This technical report presents DuMate-DeepResearch, a multi-agent DR framework built on the Qianfan Agent Foundry. The framework decouples the Agent Core, which handles task understanding, planning, and scheduling, from an extensible Tool Ecosystem for retrieval, evidence acquisition, and report rendering, making every intermediate decision and tool invocation explicitly traceable. Building on this infrastructure, DuMate-DeepResearch further introduces three mechanisms: (i) a graph-based dynamic planning strategy expands the research roadmap coarse-to-fine and continuously revises it through reflection, re-planning, backtracking, and parallel branching; (ii) a recursive two-level execution design delegates each complex search sub-task to an inner Search Agent that runs its own planning loop, isolating noisy retrieval and stabilizing long-horizon execution; (iii) a rubric-based test-time optimization mechanism dynamically generates task-specific quality criteria and uses them as live reasoning scaffolds for evidence-grounded synthesis and adaptive stopping. Across two deep research benchmarks, DuMate-DeepResearch establishes new state-of-the-art results: the best overall score (58.03%) on DeepResearch Bench, and the best overall score (61.95%) on DeepResearch Bench II while ranking first in information recall and analysis.

cs.AI↗

Co-Fusion4D: Spatio-temporal Collaborative Fusion for Robust 3D Object Detection

In autonomous driving, 3D object detection is essential for accurate perception and reliable decision-making. However, object motion and ego-motion often induce cross-frame spatiotemporal inconsistencies in BEV-based detectors, leading to temporal BEV feature misalignment and degraded spatiotemporal consistency. To address these challenges, we propose Co-Fusion4D, a unified framework that explicitly preserves cross-frame spatiotemporal consistency and suppresses temporal feature drift. Co-Fusion4D adopts a current-frame-centric strategy, treating the current frame as the primary source of information while selectively incorporating historical frames after spatiotemporal filtering and alignment. This dominant-complementary mechanism effectively mitigates cumulative alignment errors, suppresses noisy feature propagation, and exploits reliable temporal cues for a more consistent BEV representation. In addition, Co-Fusion4D integrates a Dual Attention Fusion (DAF) module to further enhance spatiotemporal feature interaction. DAF jointly leverages intra-frame spatial attention and inter-frame temporal attention to adaptively align and fuse multi-frame features, emphasizing motion-consistent regions while suppressing spurious correlations. By departing from conventional uniform fusion paradigms, this design substantially improves the temporal stability and discriminative capability of BEV representations. Extensive experiments on the nuScenes benchmark demonstrate that Co-Fusion4D achieves state-of-the-art performance, with 74.9% mAP and 75.6% NDS, without relying on test-time augmentation or external data.

cs.CV↗

MTraining: Distributed Dynamic Sparse Attention for Efficient Ultra-Long Context Training

The adoption of long context windows has become a standard feature in Large Language Models (LLMs), as extended contexts significantly enhance their capacity for complex reasoning and broaden their applicability across diverse scenarios. Dynamic sparse attention is a promising approach for reducing the computational cost of long-context. However, efficiently training LLMs with dynamic sparse attention on ultra-long contexts-especially in distributed settings-remains a significant challenge, due in large part to worker- and step-level imbalance. This paper introduces MTraining, a novel distributed methodology leveraging dynamic sparse attention to enable efficient training for LLMs with ultra-long contexts. Specifically, MTraining integrates three key components: a dynamic sparse training pattern, balanced sparse ring attention, and hierarchical sparse ring attention. These components are designed to synergistically address the computational imbalance and communication overheads inherent in dynamic sparse attention mechanisms during the training of models with extensive context lengths. We demonstrate the efficacy of MTraining by training Qwen2.5-3B, successfully expanding its context window from 32K to 512K tokens on a cluster of 32 A100 GPUs. Our evaluations on a comprehensive suite of downstream tasks, including RULER, PG-19, InfiniteBench, and Needle In A Haystack, reveal that MTraining achieves up to a 6x higher training throughput while preserving model accuracy. Our code is available at https://github.com/microsoft/MInference/tree/main/MTraining.

cs.CL↗

RadThinking: A Dataset for Longitudinal Clinical Reasoning in Radiology

Cancer screening is a reasoning task. A radiologist observes findings, compares them to prior scans, integrates clinical context, and reaches a diagnostic conclusion confirmed by pathology. We present RadThinking, a Visual Question Answering (VQA) dataset that makes this reasoning explicit and trainable. RadThinking releases VQA pairs at three difficulty tiers. Foundation VQAs are atomic perception questions. Single-step reasoning VQAs apply one clinical rule. Compositional VQAs require multi-step chain-of-thought to reach a guideline category such as LI-RADS-5. For every compositional VQA, we release the chain of foundation VQAs that solves it. The chain follows the rules of the governing clinical reporting standard. The dataset spans 20,362 CT scans from 9,131 patients across 43 cancer groups, plus 2,077 verified healthy controls with >1-year follow-up. To our knowledge, RadThinking is the first cancer-screening VQA corpus that stratifies questions by reasoning depth and grounds compositions in clinical reporting standards. The foundation tier supplies atomic perception supervision. The compositional tier supplies chain-of-thought data and verifiable rewards for reinforcement-learning recipes such as DeepSeek-R1 and OpenAI o1. RadThinking enables systematic training and evaluation of whether AI systems can reason about cancer, not merely detect it.

cs.CV↗

From Anchors to Supervision: Memory-Graph Guided Corpus-Free Unlearning for Large Language Models

Large language models (LLMs) may memorize sensitive or copyrighted content, raising significant privacy and legal concerns. While machine unlearning has emerged as a potential remedy, prevailing paradigms rely on user-provided forget sets, making unlearning requests difficult to audit and exposing systems to secondary leakage and malicious abuse. We propose MAGE, a Memory-grAph Guided Erasure framework for user-minimized, corpus-free unlearning. Given only a lightweight user anchor that identifies a target entity, MAGE probes the target LLM to recover target-related memorization, organizes it into a weighted local memory graph, and synthesizes scoped supervision for unlearning. MAGE is model-agnostic, can be plugged into standard unlearning methods, and requires no access to the original training corpus. Experiments on two benchmarks, TOFU and RWKU, demonstrate that MAGE's self-generated supervision achieves effective unlearning performance comparable to supervision generated with external reference, while preserving overall utility. These results support a practical and auditable unlearning workflow driven by minimal anchors rather than user-supplied forget corpora.

cs.CL↗

CLASP: Closed-loop Asynchronous Spatial Perception for Open-vocabulary Desktop Object Grasping

Robot grasping of desktop object is widely used in intelligent manufacturing, logistics, and agriculture.Although vision-language models (VLMs) show strong potential for robotic manipulation, their deployment in low-level grasping faces key challenges: scarce high-quality multimodal demonstrations, spatial hallucination caused by weak geometric grounding, and the fragility of open-loop execution in dynamic environments. To address these challenges, we propose Closed-Loop Asynchronous Spatial Perception(CLASP), a novel asynchronous closed-loop framework that integrates multimodal perception, logical reasoning, and state-reflective feedback. First, we design a Dual-Pathway Hierarchical Perception module that decouples high-level semantic intent from geometric grounding. The design guides the output of the inference model and the definite action tuples, reducing spatial illusions. Second, an Asynchronous Closed-Loop Evaluator is implemented to compare pre- and post-execution states, providing text-based diagnostic feedback to establish a robust error-correction loop and improving the vulnerability of traditional open-loop execution in dynamic environments. Finally, we design a scalable multi-modal data engine that automatically synthesizes high-quality spatial annotations and reasoning templates from real and synthetic scenes without human teleoperation. Extensive experiments demonstrate that our approach significantly outperforms existing baselines, achieving an 87.0% overall success rate. Notably, the proposed framework exhibits remarkable generalization across diverse objects, bridging the sim-to-real gap and providing exceptional robustness in geometrically challenging categories and cluttered scenarios.

cs.RO↗