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William H. Weir

Publications and source records attributed to William H. Weir.

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Multilayer Modularity Belief Propagation To Assess Detectability Of Community Structure

Modularity based community detection encompasses a number of widely used, efficient heuristics for identification of structure in networks. Recently, a belief propagation approach to modularity optimization provided a useful guide for identifying non-trivial structure in single-layer networks in a way that other optimization heuristics have not. In this paper, we extend modularity belief propagation to multilayer networks. As part of this development, we also directly incorporate a resolution parameter. We show that adjusting the resolution parameter affects the convergence properties of the algorithm and yields different community structures than the baseline. We compare our approach with a widely used community detection tool, GenLouvain, across a range of synthetic, multilayer benchmark networks, demonstrating that our method performs comparably to the state of the art. Finally, we demonstrate the practical advantages of the additional information provided by our tool by way of two real-world network examples. We show how the convergence properties of the algorithm can be used in selecting the appropriate resolution and coupling parameters and how the node-level marginals provide an interpretation for the strength of attachment to the identified communities. We have released our tool as a Python package for convenient use.

cs.SI

Post-processing partitions to identify domains of modularity optimization

We introduce the Convex Hull of Admissible Modularity Partitions (CHAMP) algorithm to prune and prioritize different network community structures identified across multiple runs of possibly various computational heuristics. Given a set of partitions, CHAMP identifies the domain of modularity optimization for each partition ---i.e., the parameter-space domain where it has the largest modularity relative to the input set---discarding partitions with empty domains to obtain the subset of partitions that are "admissible" candidate community structures that remain potentially optimal over indicated parameter domains. Importantly, CHAMP can be used for multi-dimensional parameter spaces, such as those for multilayer networks where one includes a resolution parameter and interlayer coupling. Using the results from CHAMP, a user can more appropriately select robust community structures by observing the sizes of domains of optimization and the pairwise comparisons between partitions in the admissible subset. We demonstrate the utility of CHAMP with several example networks. In these examples, CHAMP focuses attention onto pruned subsets of admissible partitions that are 20-to-1785 times smaller than the sets of unique partitions obtained by community detection heuristics that were input into CHAMP.

cs.SI