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William P. Marnane

Publications and source records attributed to William P. Marnane.

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Classifying absence seizure generation mechanisms: A critical transitions framework

Understanding how the brain switches from normal activity to an epileptic seizure is essential for improving seizure therapy, yet the underlying seizure generation mechanisms remain largely unknown. In particular, while seizure onset has been described as a critical transition (CT), there is no consensus on whether (i) bifurcation-induced, (ii) noise-induced, or (iii) bifurcation/noise-induced CTs are responsible. To clarify this, we develop a versatile CT-classification framework that can be applied to seizures in both animals and humans. First, we identify a canonical mathematical model which displays CTs that closely resemble voltage recordings of real seizures and can be of the three types mentioned above. We then identify distinctive properties of each CT-type in the model's output and use them to train a machine learning CT-type classifier. Finally, we apply the model-trained classifier to voltage recordings from epileptic rodents which consist of thousands of real absence seizures. We find that the largest proportion of analysed seizures are classified as noise-induced CTs. In other words, our results on absence seizures in rodents are in contrast to the conventional view that seizures are predominantly bifurcation-induced, and indicate that different CT mechanisms may dominate different seizure types.

math.DS

Tracé alternant detector for grading hypoxic-ischemic encephalopathy in neonatal EEG

Electroencephalography (EEG) is an important clinical tool to capture sleep-wake cycling. It can also be used for grading injury, known as hypoxic-ischaemic encephalopathy(HIE), caused by lack of oxygen or blood to the brain during birth. Tracé alternant (TA) is a distinctive component of normal quiet sleep which consists of alternating periods of high-voltage activity (bursts) separated by lower-voltage activity (inter-bursts). This study presents an automated method to grade the severity of injury in HIE, using an automated method to first detect activity. The TA detector uses the output of an existing method to detect inter-bursts. Features are extracted from a processed output and then combined in a support vector machine (SVM). Next, we develop an HIE grading system using the TA detector by combining different features from the temporal organisation of the detected TA mask, again using an SVM. Training and testing for both models use a leave-one-baby-out cross-validation procedure, with model hyper-parameters selected from nested cross validations. The TA detector, tested on EEG from 71 healthy term neonates, has an accuracy of 79.1% (Cohen's \k{appa}=0.55). the grading system, tested on EEG from 54 term neonates in intensive care, has an accuracy of 81.5% (\k{appa}=0.74). These results validate how detecting the presence or absence of TA can be used to quantify the grade of HIE injury in neonatal EEG and open up the possibility of a clinically-meaningful grading system.

eess.SP