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Wilmer Leal

Publications and source records attributed to Wilmer Leal.

7 recordsLinked to original sources

Time-Varying Data as Sheaves: an Invitation to Narratives

Modern science and engineering increasingly rely on time-varying data, yet the mathematical tools used to model temporal phenomena are often developed within separate disciplines, obscuring common principles and limiting the transfer of ideas across fields. This chapter presents the theory of narratives, an abstract framework for time-varying objects of any mathematical kind that supports both theoretical investigations and applications. To illustrate this perspective, the chapter develops three vignettes, each illustrating a different research direction. The first addresses a general concern: What information loss can occur when switching between different representations of temporal data? The second concerns structural and algorithmic approaches: How can we systematically decompose time-varying data into simple pieces and obtain invariants describing its structural complexity? The third is an application to control theory: How can we model multi-agent systems with switching communication topologies? More important than any individual vignette, the central message of this invitation is that a suitable abstract perspective can organize and guide research across remarkably diverse mathematical and scientific domains.

cs.AI

Dialectica Petri Nets

The categorical modeling of Petri nets has received much attention recently. The Dialectica construction has also had its fair share of attention. We revisit the use of the Dialectica construction as a categorical model for Petri nets generalising the original application to suggest that Petri nets with different kinds of transitions can be modelled in the same categorical framework. Transitions representing truth-values, probabilities, rates or multiplicities, evaluated in different algebraic structures called lineales are useful and are modelled here in the same category. We investigate (categorical instances of) this generalised model and its connections to more recent models of categorical nets.

math.CT

Towards a Unified Theory of Time-Varying Data

What is a time-varying graph, a time-varying topological space, or, more generally, a mathematical structure that evolves over time? In this work, we lay the foundations for a general theory of temporal data by introducing categories of narratives. These are sheaves on posets of time intervals that encode snapshots of a temporal object along with the relationships between them. This theory satisfies five desiderata distilled from the burgeoning field of time-varying graphs: (D1) it defines both time-varying objects and their morphisms; (D2) it distinguishes between cumulative and persistent interpretations and provides principled methods for transitioning between them; (D3) it systematically lifts static notions to their temporal analogues; (D4) it is object agnostic; (D5) it integrates with theories of dynamical systems. To achieve this, we build upon existing categorical and sheaf-theoretic approaches to temporal graph theory, generalizing them to any category with limits and colimits. We also formalize tacit intuitions that, while present, often remain implicit in temporal graph theory. Beyond synthesizing and reformulating existing ideas in categorical language, we introduce sheaf-theoretic constructions and prove results that, to our knowledge, have not appeared in the temporal data literature - such as the adjunction between persistent and cumulative narratives. More importantly, we integrate these existing and novel elements into a consistent and coherent framework, setting the stage for a unified theory of time-varying data.

math.CT

Diachronic Data Analysis Supports and Refines Conceptual Metaphor Theory

As a contribution to metaphor analysis, we introduce a statistical, data-based investigation with empirical analysis of long-standing conjectures and a first-ever empirical exploration of the systematic features of metaphors. Conversely, this also makes metaphor theory available as a basis of meaning emergence that can be quantitatively explored and integrated into the framework of NLP.

cs.CL

Edge-based analysis of networks: Curvatures of graphs and hypergraphs

The relations, rather than the elements, constitute the structure of networks. We therefore develop a systematic approach to the analysis of networks, modelled as graphs or hypergraphs, that is based on structural properties of (hyper)edges, instead of vertices. For that purpose, we utilize so-called network curvatures. These curvatures quantify the local structural properties of (hyper)edges, that is, how, and how well, they are connected to others. In the case of directed networks, they assess the input they receive and the output they produce, and relations between them. With those tools, we can investigate biological networks. As examples, we apply our methods here to protein-protein interaction, transcriptional regulatory and metabolic networks.

cs.DM

Formal structure of periodic system of elements

For more than 150 years the structure of the periodic system of the chemical elements has intensively motivated research in different areas of chemistry and physics. However, there is still no unified picture of what a periodic system is. Herein, based on the relations of order and similarity, we report a formal mathematical structure for the periodic system, which corresponds to an ordered hypergraph. It is shown that the current periodic system of chemical elements is an instance of the general structure. The definition is used to devise a tailored periodic system of polarizability of single covalent bonds, where order relationships are quantified within subsets of similar bonds and among these classes. The generalised periodic system allows envisioning periodic systems in other disciplines of science and humanities.

cs.DM

Forman-Ricci Curvature for Hypergraphs

In contrast to graph-based models for complex networks, hypergraphs are more general structures going beyond binary relations of graphs. For graphs, statistics gauging different aspects of their structures have been devised and there is undergoing research for devising them for hypergraphs. Forman-Ricci curvature is a statistics for graphs, which is based on Riemannian geometry, and that stresses the relational character of vertices in a network through the analysis of edges rather than vertices. In spite of the different applications of this curvature, it has not yet been formulated for hypergraphs. Here we devise the Forman-Ricci curvature for directed and undirected hypergraphs, where the curvature for graphs is a particular case. We report its upper and lower bounds and the respective bounds for the graph case. The curvature quantifies the trade-off between hyperedge(arc) size and the degree of participation of hyperedge(arc) vertices in other hyperedges(arcs). We calculated the curvature for two large networks: Wikipedia vote network and \emph{Escherichia coli} metabolic network. In the first case the curvature is ruled by hyperedge size, while in the second by hyperedge degree. We found that the number of users involved in Wikipedia elections goes hand-in-hand with the participation of experienced users. The curvature values of the metabolic network allowed detecting redundant and bottle neck reactions. It is found that ADP phosphorilation is the metabolic bottle neck reaction but that the reverse reaction is not that central for the metabolism.

cs.DM