arXiv subjects

Wolfgang Nejdl

Publications and source records attributed to Wolfgang Nejdl.

At least 37 records · Page 2Linked to original sources

arXiv2025

Comply: Learning Sentences with Complex Weights inspired by Fruit Fly Olfaction

Biologically inspired neural networks offer alternative avenues to model data distributions. FlyVec is a recent example that draws inspiration from the fruit fly's olfactory circuit to tackle the task of learning word embeddings. Surprisingly, this model performs competitively even against deep learning approaches specifically designed to encode text, and it does so with the highest degree of computational efficiency. We pose the question of whether this performance can be improved further. For this, we introduce Comply. By incorporating positional information through complex weights, we enable a single-layer neural network to learn sequence representations. Our experiments show that Comply not only supersedes FlyVec but also performs on par with significantly larger state-of-the-art models. We achieve this without additional parameters. Comply yields sparse contextual representations of sentences that can be interpreted explicitly from the neuron weights.

cs.CL↗

arXiv2025

Enhancing Offline Reinforcement Learning with Curriculum Learning-Based Trajectory Valuation

The success of deep reinforcement learning (DRL) relies on the availability and quality of training data, often requiring extensive interactions with specific environments. In many real-world scenarios, where data collection is costly and risky, offline reinforcement learning (RL) offers a solution by utilizing data collected by domain experts and searching for a batch-constrained optimal policy. This approach is further augmented by incorporating external data sources, expanding the range and diversity of data collection possibilities. However, existing offline RL methods often struggle with challenges posed by non-matching data from these external sources. In this work, we specifically address the problem of source-target domain mismatch in scenarios involving mixed datasets, characterized by a predominance of source data generated from random or suboptimal policies and a limited amount of target data generated from higher-quality policies. To tackle this problem, we introduce Transition Scoring (TS), a novel method that assigns scores to transitions based on their similarity to the target domain, and propose Curriculum Learning-Based Trajectory Valuation (CLTV), which effectively leverages these transition scores to identify and prioritize high-quality trajectories through a curriculum learning approach. Our extensive experiments across various offline RL methods and MuJoCo environments, complemented by rigorous theoretical analysis, demonstrate that CLTV enhances the overall performance and transferability of policies learned by offline RL algorithms.

cs.LG↗

arXiv2024

Towards Precision Healthcare: Robust Fusion of Time Series and Image Data

With the increasing availability of diverse data types, particularly images and time series data from medical experiments, there is a growing demand for techniques designed to combine various modalities of data effectively. Our motivation comes from the important areas of predicting mortality and phenotyping where using different modalities of data could significantly improve our ability to predict. To tackle this challenge, we introduce a new method that uses two separate encoders, one for each type of data, allowing the model to understand complex patterns in both visual and time-based information. Apart from the technical challenges, our goal is to make the predictive model more robust in noisy conditions and perform better than current methods. We also deal with imbalanced datasets and use an uncertainty loss function, yielding improved results while simultaneously providing a principled means of modeling uncertainty. Additionally, we include attention mechanisms to fuse different modalities, allowing the model to focus on what's important for each task. We tested our approach using the comprehensive multimodal MIMIC dataset, combining MIMIC-IV and MIMIC-CXR datasets. Our experiments show that our method is effective in improving multimodal deep learning for clinical applications. The code will be made available online.

eess.IV↗

arXiv2024

TIGQA:An Expert Annotated Question Answering Dataset in Tigrinya

The absence of explicitly tailored, accessible annotated datasets for educational purposes presents a notable obstacle for NLP tasks in languages with limited resources.This study initially explores the feasibility of using machine translation (MT) to convert an existing dataset into a Tigrinya dataset in SQuAD format. As a result, we present TIGQA, an expert annotated educational dataset consisting of 2.68K question-answer pairs covering 122 diverse topics such as climate, water, and traffic. These pairs are from 537 context paragraphs in publicly accessible Tigrinya and Biology books. Through comprehensive analyses, we demonstrate that the TIGQA dataset requires skills beyond simple word matching, requiring both single-sentence and multiple-sentence inference abilities. We conduct experiments using state-of-the art MRC methods, marking the first exploration of such models on TIGQA. Additionally, we estimate human performance on the dataset and juxtapose it with the results obtained from pretrained models.The notable disparities between human performance and best model performance underscore the potential for further enhancements to TIGQA through continued research. Our dataset is freely accessible via the provided link to encourage the research community to address the challenges in the Tigrinya MRC.

cs.CL↗

arXiv2024

Beyond Accuracy: Investigating Error Types in GPT-4 Responses to USMLE Questions

GPT-4 demonstrates high accuracy in medical QA tasks, leading with an accuracy of 86.70%, followed by Med-PaLM 2 at 86.50%. However, around 14% of errors remain. Additionally, current works use GPT-4 to only predict the correct option without providing any explanation and thus do not provide any insight into the thinking process and reasoning used by GPT-4 or other LLMs. Therefore, we introduce a new domain-specific error taxonomy derived from collaboration with medical students. Our GPT-4 USMLE Error (G4UE) dataset comprises 4153 GPT-4 correct responses and 919 incorrect responses to the United States Medical Licensing Examination (USMLE) respectively. These responses are quite long (258 words on average), containing detailed explanations from GPT-4 justifying the selected option. We then launch a large-scale annotation study using the Potato annotation platform and recruit 44 medical experts through Prolific, a well-known crowdsourcing platform. We annotated 300 out of these 919 incorrect data points at a granular level for different classes and created a multi-label span to identify the reasons behind the error. In our annotated dataset, a substantial portion of GPT-4's incorrect responses is categorized as a "Reasonable response by GPT-4," by annotators. This sheds light on the challenge of discerning explanations that may lead to incorrect options, even among trained medical professionals. We also provide medical concepts and medical semantic predications extracted using the SemRep tool for every data point. We believe that it will aid in evaluating the ability of LLMs to answer complex medical questions. We make the resources available at https://github.com/roysoumya/usmle-gpt4-error-taxonomy .

cs.CL↗

arXiv2024

ECOR: Explainable CLIP for Object Recognition

Large Vision Language Models (VLMs), such as CLIP, have significantly contributed to various computer vision tasks, including object recognition and object detection. Their open vocabulary feature enhances their value. However, their black-box nature and lack of explainability in predictions make them less trustworthy in critical domains. Recently, some work has been done to force VLMs to provide reasonable rationales for object recognition, but this often comes at the expense of classification accuracy. In this paper, we first propose a mathematical definition of explainability in the object recognition task based on the joint probability distribution of categories and rationales, then leverage this definition to fine-tune CLIP in an explainable manner. Through evaluations of different datasets, our method demonstrates state-of-the-art performance in explainable classification. Notably, it excels in zero-shot settings, showcasing its adaptability. This advancement improves explainable object recognition, enhancing trust across diverse applications. The code will be made available online upon publication.

cs.CV↗

arXiv2024

Multiple Models for Recommending Temporal Aspects of Entities

Entity aspect recommendation is an emerging task in semantic search that helps users discover serendipitous and prominent information with respect to an entity, of which salience (e.g., popularity) is the most important factor in previous work. However, entity aspects are temporally dynamic and often driven by events happening over time. For such cases, aspect suggestion based solely on salience features can give unsatisfactory results, for two reasons. First, salience is often accumulated over a long time period and does not account for recency. Second, many aspects related to an event entity are strongly time-dependent. In this paper, we study the task of temporal aspect recommendation for a given entity, which aims at recommending the most relevant aspects and takes into account time in order to improve search experience. We propose a novel event-centric ensemble ranking method that learns from multiple time and type-dependent models and dynamically trades off salience and recency characteristics. Through extensive experiments on real-world query logs, we demonstrate that our method is robust and achieves better effectiveness than competitive baselines.

cs.IR↗

arXiv2024

IVP-VAE: Modeling EHR Time Series with Initial Value Problem Solvers

Continuous-time models such as Neural ODEs and Neural Flows have shown promising results in analyzing irregularly sampled time series frequently encountered in electronic health records. Based on these models, time series are typically processed with a hybrid of an initial value problem (IVP) solver and a recurrent neural network within the variational autoencoder architecture. Sequentially solving IVPs makes such models computationally less efficient. In this paper, we propose to model time series purely with continuous processes whose state evolution can be approximated directly by IVPs. This eliminates the need for recurrent computation and enables multiple states to evolve in parallel. We further fuse the encoder and decoder with one IVP solver utilizing its invertibility, which leads to fewer parameters and faster convergence. Experiments on three real-world datasets show that the proposed method can systematically outperform its predecessors, achieve state-of-the-art results, and have significant advantages in terms of data efficiency.

cs.LG↗

arXiv2023

Efficient ECG-based Atrial Fibrillation Detection via Parameterised Hypercomplex Neural Networks

Atrial fibrillation (AF) is the most common cardiac arrhythmia and associated with a high risk for serious conditions like stroke. The use of wearable devices embedded with automatic and timely AF assessment from electrocardiograms (ECGs) has shown to be promising in preventing life-threatening situations. Although deep neural networks have demonstrated superiority in model performance, their use on wearable devices is limited by the trade-off between model performance and complexity. In this work, we propose to use lightweight convolutional neural networks (CNNs) with parameterised hypercomplex (PH) layers for AF detection based on ECGs. The proposed approach trains small-scale CNNs, thus overcoming the limited computing resources on wearable devices. We show comparable performance to corresponding real-valued CNNs on two publicly available ECG datasets using significantly fewer model parameters. PH models are more flexible than other hypercomplex neural networks and can operate on any number of input ECG leads.

eess.SP↗

arXiv2023

Quantum Algorithm for Maximum Biclique Problem

Identifying a biclique with the maximum number of edges bears considerable implications for numerous fields of application, such as detecting anomalies in E-commerce transactions, discerning protein-protein interactions in biology, and refining the efficacy of social network recommendation algorithms. However, the inherent NP-hardness of this problem significantly complicates the matter. The prohibitive time complexity of existing algorithms is the primary bottleneck constraining the application scenarios. Aiming to address this challenge, we present an unprecedented exploration of a quantum computing approach. Efficient quantum algorithms, as a crucial future direction for handling NP-hard problems, are presently under intensive investigation, of which the potential has already been proven in practical arenas such as cybersecurity. However, in the field of quantum algorithms for graph databases, little work has been done due to the challenges presented by the quantum representation of complex graph topologies. In this study, we delve into the intricacies of encoding a bipartite graph on a quantum computer. Given a bipartite graph with n vertices, we propose a ground-breaking algorithm qMBS with time complexity O^*(2^(n/2)), illustrating a quadratic speed-up in terms of complexity compared to the state-of-the-art. Furthermore, we detail two variants tailored for the maximum vertex biclique problem and the maximum balanced biclique problem. To corroborate the practical performance and efficacy of our proposed algorithms, we have conducted proof-of-principle experiments utilizing IBM quantum simulators, of which the results provide a substantial validation of our approach to the extent possible to date.

quant-ph↗

arXiv2023

GeneMask: Fast Pretraining of Gene Sequences to Enable Few-Shot Learning

Large-scale language models such as DNABert and LOGO aim to learn optimal gene representations and are trained on the entire Human Reference Genome. However, standard tokenization schemes involve a simple sliding window of tokens like k-mers that do not leverage any gene-based semantics and thus may lead to (trivial) masking of easily predictable sequences and subsequently inefficient Masked Language Modeling (MLM) training. Therefore, we propose a novel masking algorithm, GeneMask, for MLM training of gene sequences, where we randomly identify positions in a gene sequence as mask centers and locally select the span around the mask center with the highest Normalized Pointwise Mutual Information (NPMI) to mask. We observe that in the absence of human-understandable semantics in the genomics domain (in contrast, semantic units like words and phrases are inherently available in NLP), GeneMask-based models substantially outperform the SOTA models (DNABert and LOGO) over four benchmark gene sequence classification datasets in five few-shot settings (10 to 1000-shot). More significantly, the GeneMask-based DNABert model is trained for less than one-tenth of the number of epochs of the original SOTA model. We also observe a strong correlation between top-ranked PMI tokens and conserved DNA sequence motifs, which may indicate the incorporation of latent genomic information. The codes (including trained models) and datasets are made publicly available at https://github.com/roysoumya/GeneMask.

cs.CL↗

arXiv2023

A Review of the Role of Causality in Developing Trustworthy AI Systems

State-of-the-art AI models largely lack an understanding of the cause-effect relationship that governs human understanding of the real world. Consequently, these models do not generalize to unseen data, often produce unfair results, and are difficult to interpret. This has led to efforts to improve the trustworthiness aspects of AI models. Recently, causal modeling and inference methods have emerged as powerful tools. This review aims to provide the reader with an overview of causal methods that have been developed to improve the trustworthiness of AI models. We hope that our contribution will motivate future research on causality-based solutions for trustworthy AI.

cs.AI↗

arXiv2022

Discrimination and Class Imbalance Aware Online Naive Bayes

Fairness-aware mining of massive data streams is a growing and challenging concern in the contemporary domain of machine learning. Many stream learning algorithms are used to replace humans at critical decision-making points e.g., hiring staff, assessing credit risk, etc. This calls for handling massive incoming information with minimum response delay while ensuring fair and high quality decisions. Recent discrimination-aware learning methods are optimized based on overall accuracy. However, the overall accuracy is biased in favor of the majority class; therefore, state-of-the-art methods mainly diminish discrimination by partially or completely ignoring the minority class. In this context, we propose a novel adaptation of Naïve Bayes to mitigate discrimination embedded in the streams while maintaining high predictive performance for both the majority and minority classes. Our proposed algorithm is simple, fast, and attains multi-objective optimization goals. To handle class imbalance and concept drifts, a dynamic instance weighting module is proposed, which gives more importance to recent instances and less importance to obsolete instances based on their membership in minority or majority class. We conducted experiments on a range of streaming and static datasets and deduced that our proposed methodology outperforms existing state-of-the-art fairness-aware methods in terms of both discrimination score and balanced accuracy.

cs.LG↗

arXiv2022

A Multi-task Model for Sentiment Aided Stance Detection of Climate Change Tweets

Climate change has become one of the biggest challenges of our time. Social media platforms such as Twitter play an important role in raising public awareness and spreading knowledge about the dangers of the current climate crisis. With the increasing number of campaigns and communication about climate change through social media, the information could create more awareness and reach the general public and policy makers. However, these Twitter communications lead to polarization of beliefs, opinion-dominated ideologies, and often a split into two communities of climate change deniers and believers. In this paper, we propose a framework that helps identify denier statements on Twitter and thus classifies the stance of the tweet into one of the two attitudes towards climate change (denier/believer). The sentimental aspects of Twitter data on climate change are deeply rooted in general public attitudes toward climate change. Therefore, our work focuses on learning two closely related tasks: Stance Detection and Sentiment Analysis of climate change tweets. We propose a multi-task framework that performs stance detection (primary task) and sentiment analysis (auxiliary task) simultaneously. The proposed model incorporates the feature-specific and shared-specific attention frameworks to fuse multiple features and learn the generalized features for both tasks. The experimental results show that the proposed framework increases the performance of the primary task, i.e., stance detection by benefiting from the auxiliary task, i.e., sentiment analysis compared to its uni-modal and single-task variants.

cs.CL↗

arXiv2022

This Patient Looks Like That Patient: Prototypical Networks for Interpretable Diagnosis Prediction from Clinical Text

The use of deep neural models for diagnosis prediction from clinical text has shown promising results. However, in clinical practice such models must not only be accurate, but provide doctors with interpretable and helpful results. We introduce ProtoPatient, a novel method based on prototypical networks and label-wise attention with both of these abilities. ProtoPatient makes predictions based on parts of the text that are similar to prototypical patients - providing justifications that doctors understand. We evaluate the model on two publicly available clinical datasets and show that it outperforms existing baselines. Quantitative and qualitative evaluations with medical doctors further demonstrate that the model provides valuable explanations for clinical decision support.

cs.CL↗

arXiv2022

How to reduce the search space of Entity Resolution: with Blocking or Nearest Neighbor search?

Entity Resolution suffers from quadratic time complexity. To increase its time efficiency, three kinds of filtering techniques are typically used for restricting its search space: (i) blocking workflows, which group together entity profiles with identical or similar signatures, (ii) string similarity join algorithms, which quickly detect entities more similar than a threshold, and (iii) nearest-neighbor methods, which convert every entity profile into a vector and quickly detect the closest entities according to the specified distance function. Numerous methods have been proposed for each type, but the literature lacks a comparative analysis of their relative performance. As we show in this work, this is a non-trivial task, due to the significant impact of configuration parameters on the performance of each filtering technique. We perform the first systematic experimental study that investigates the relative performance of the main methods per type over 10 real-world datasets. For each method, we consider a plethora of parameter configurations, optimizing it with respect to recall and precision. For each dataset, we consider both schema-agnostic and schema-based settings. The experimental results provide novel insights into the effectiveness and time efficiency of the considered techniques, demonstrating the superiority of blocking workflows and string similarity joins.

cs.DB↗

arXiv2022

Rites de Passage: Elucidating Displacement to Emplacement of Refugees on Twitter

Social media deliberations allow to explore refugee-related is-sues. AI-based studies have investigated refugee issues mostly around a specific event and considered unimodal approaches. Contrarily, we have employed a multimodal architecture for probing the refugee journeys from their home to host nations. We draw insights from Arnold van Gennep's anthropological work 'Les Rites de Passage', which systematically analyzed an individual's transition from one group or society to another. Based on Gennep's separation-transition-incorporation framework, we have identified four phases of refugee journeys: Arrival of Refugees, Temporal stay at Asylums, Rehabilitation, and Integration of Refugees into the host nation. We collected 0.23 million multimodal tweets from April 2020 to March 2021 for testing this proposed frame-work. We find that a combination of transformer-based language models and state-of-the-art image recognition models, such as fusion of BERT+LSTM and InceptionV4, can out-perform unimodal models. Subsequently, to test the practical implication of our proposed model in real-time, we have considered 0.01 million multimodal tweets related to the 2022 Ukrainian refugee crisis. An F1-score of 71.88 % for this 2022 crisis confirms the generalizability of our proposed framework.

cs.CY↗

arXiv2022

Example-based Explanations with Adversarial Attacks for Respiratory Sound Analysis

Respiratory sound classification is an important tool for remote screening of respiratory-related diseases such as pneumonia, asthma, and COVID-19. To facilitate the interpretability of classification results, especially ones based on deep learning, many explanation methods have been proposed using prototypes. However, existing explanation techniques often assume that the data is non-biased and the prediction results can be explained by a set of prototypical examples. In this work, we develop a unified example-based explanation method for selecting both representative data (prototypes) and outliers (criticisms). In particular, we propose a novel application of adversarial attacks to generate an explanation spectrum of data instances via an iterative fast gradient sign method. Such unified explanation can avoid over-generalisation and bias by allowing human experts to assess the model mistakes case by case. We performed a wide range of quantitative and qualitative evaluations to show that our approach generates effective and understandable explanation and is robust with many deep learning models

cs.SD↗