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Xi Li

Publications and source records attributed to Xi Li.

At least 217 records · Page 12Linked to original sources

GNN-PT: Enhanced Prediction of Compound-protein Interactions by Integrating Protein Transformer

The prediction of protein interactions (CPIs) is crucial for the in-silico screening step in drug discovery. Recently, many end-to-end representation learning methods using deep neural networks have achieved significantly better performance than traditional machine learning algorithms. Much effort has focused on the compound representation or the information extraction from the compound-protein interaction to improve the model capability by taking the advantage of the neural attention mechanism. However, previous studies have paid little attention to representing the protein sequences, in which the long-range interactions of residue pairs are essential for characterizing the structural properties arising from the protein folding. We incorporate the self-attention mechanism into the protein representation module for CPI modeling, which aims at capturing the long-range interaction information within proteins. The proposed module concerning protein representation, called Protein Transformer, with an integration with an existing CPI model, has shown a significant improvement in the prediction performance when compared with several existing CPI models.

q-bio.QM↗

TapLab: A Fast Framework for Semantic Video Segmentation Tapping into Compressed-Domain Knowledge

Real-time semantic video segmentation is a challenging task due to the strict requirements of inference speed. Recent approaches mainly devote great efforts to reducing the model size for high efficiency. In this paper, we rethink this problem from a different viewpoint: using knowledge contained in compressed videos. We propose a simple and effective framework, dubbed TapLab, to tap into resources from the compressed domain. Specifically, we design a fast feature warping module using motion vectors for acceleration. To reduce the noise introduced by motion vectors, we design a residual-guided correction module and a residual-guided frame selection module using residuals. TapLab significantly reduces redundant computations of the state-of-the-art fast semantic image segmentation models, running 3 to 10 times faster with controllable accuracy degradation. The experimental results show that TapLab achieves 70.6% mIoU on the Cityscapes dataset at 99.8 FPS with a single GPU card for the 1024x2048 videos. A high-speed version even reaches the speed of 160+ FPS. Codes will be available soon at https://github.com/Sixkplus/TapLab.

cs.CV↗

TextRay: Contour-based Geometric Modeling for Arbitrary-shaped Scene Text Detection

Arbitrary-shaped text detection is a challenging task due to the complex geometric layouts of texts such as large aspect ratios, various scales, random rotations and curve shapes. Most state-of-the-art methods solve this problem from bottom-up perspectives, seeking to model a text instance of complex geometric layouts with simple local units (e.g., local boxes or pixels) and generate detections with heuristic post-processings. In this work, we propose an arbitrary-shaped text detection method, namely TextRay, which conducts top-down contour-based geometric modeling and geometric parameter learning within a single-shot anchor-free framework. The geometric modeling is carried out under polar system with a bidirectional mapping scheme between shape space and parameter space, encoding complex geometric layouts into unified representations. For effective learning of the representations, we design a central-weighted training strategy and a content loss which builds propagation paths between geometric encodings and visual content. TextRay outputs simple polygon detections at one pass with only one NMS post-processing. Experiments on several benchmark datasets demonstrate the effectiveness of the proposed approach. The code is available at https://github.com/LianaWang/TextRay.

cs.CV↗

Ultra Fast Structure-aware Deep Lane Detection

Modern methods mainly regard lane detection as a problem of pixel-wise segmentation, which is struggling to address the problem of challenging scenarios and speed. Inspired by human perception, the recognition of lanes under severe occlusion and extreme lighting conditions is mainly based on contextual and global information. Motivated by this observation, we propose a novel, simple, yet effective formulation aiming at extremely fast speed and challenging scenarios. Specifically, we treat the process of lane detection as a row-based selecting problem using global features. With the help of row-based selecting, our formulation could significantly reduce the computational cost. Using a large receptive field on global features, we could also handle the challenging scenarios. Moreover, based on the formulation, we also propose a structural loss to explicitly model the structure of lanes. Extensive experiments on two lane detection benchmark datasets show that our method could achieve the state-of-the-art performance in terms of both speed and accuracy. A light-weight version could even achieve 300+ frames per second with the same resolution, which is at least 4x faster than previous state-of-the-art methods. Our code will be made publicly available.

cs.CV↗

On a caching system with object sharing

We consider a content-caching system thatis shared by a number of proxies. The cache could belocated in an edge-cloud datacenter and the proxies couldeach serve a large population of mobile end-users. Eachproxy operates its own LRU-list of a certain capacity inthe shared cache. The length of objects simultaneouslyappearing in plural LRU-lists is equally divided amongthem,i.e., object sharing among the LRUs. We provide a "working-set" approximation for this system to quicklyestimate the cache-hit probabilities under such objectsharing, which can be used to facilitate admission control.Also, a way to reduce ripple evictions,i.e.,setrequestoverhead, is suggested. We give numerical results for ourMemCacheD with Object Sharing (MCD-OS) prototype.

cs.PF↗

A Multi-Semantic Metapath Model for Large Scale Heterogeneous Network Representation Learning

Network Embedding has been widely studied to model and manage data in a variety of real-world applications. However, most existing works focus on networks with single-typed nodes or edges, with limited consideration of unbalanced distributions of nodes and edges. In real-world applications, networks usually consist of billions of various types of nodes and edges with abundant attributes. To tackle these challenges, in this paper we propose a multi-semantic metapath (MSM) model for large scale heterogeneous representation learning. Specifically, we generate multi-semantic metapath-based random walks to construct the heterogeneous neighborhood to handle the unbalanced distributions and propose a unified framework for the embedding learning. We conduct systematical evaluations for the proposed framework on two challenging datasets: Amazon and Alibaba. The results empirically demonstrate that MSM can achieve relatively significant gains over previous state-of-arts on link prediction.

cs.SI↗

Multitask Non-Autoregressive Model for Human Motion Prediction

Human motion prediction, which aims at predicting future human skeletons given the past ones, is a typical sequence-to-sequence problem. Therefore, extensive efforts have been continued on exploring different RNN-based encoder-decoder architectures. However, by generating target poses conditioned on the previously generated ones, these models are prone to bringing issues such as error accumulation problem. In this paper, we argue that such issue is mainly caused by adopting autoregressive manner. Hence, a novel Non-auToregressive Model (NAT) is proposed with a complete non-autoregressive decoding scheme, as well as a context encoder and a positional encoding module. More specifically, the context encoder embeds the given poses from temporal and spatial perspectives. The frame decoder is responsible for predicting each future pose independently. The positional encoding module injects positional signal into the model to indicate temporal order. Moreover, a multitask training paradigm is presented for both low-level human skeleton prediction and high-level human action recognition, resulting in the convincing improvement for the prediction task. Our approach is evaluated on Human3.6M and CMU-Mocap benchmarks and outperforms state-of-the-art autoregressive methods.

cs.CV↗

Adaptive Graph Representation Learning for Video Person Re-identification

Recent years have witnessed the remarkable progress of applying deep learning models in video person re-identification (Re-ID). A key factor for video person Re-ID is to effectively construct discriminative and robust video feature representations for many complicated situations. Part-based approaches employ spatial and temporal attention to extract representative local features. While correlations between parts are ignored in the previous methods, to leverage the relations of different parts, we propose an innovative adaptive graph representation learning scheme for video person Re-ID, which enables the contextual interactions between relevant regional features. Specifically, we exploit the pose alignment connection and the feature affinity connection to construct an adaptive structure-aware adjacency graph, which models the intrinsic relations between graph nodes. We perform feature propagation on the adjacency graph to refine regional features iteratively, and the neighbor nodes' information is taken into account for part feature representation. To learn compact and discriminative representations, we further propose a novel temporal resolution-aware regularization, which enforces the consistency among different temporal resolutions for the same identities. We conduct extensive evaluations on four benchmarks, i.e. iLIDS-VID, PRID2011, MARS, and DukeMTMC-VideoReID, experimental results achieve the competitive performance which demonstrates the effectiveness of our proposed method. The code is available at https://github.com/weleen/AGRL.pytorch.

cs.CV↗

A Survey on Generative Adversarial Networks: Variants, Applications, and Training

The Generative Models have gained considerable attention in the field of unsupervised learning via a new and practical framework called Generative Adversarial Networks (GAN) due to its outstanding data generation capability. Many models of GAN have proposed, and several practical applications emerged in various domains of computer vision and machine learning. Despite GAN's excellent success, there are still obstacles to stable training. The problems are due to Nash-equilibrium, internal covariate shift, mode collapse, vanishing gradient, and lack of proper evaluation metrics. Therefore, stable training is a crucial issue in different applications for the success of GAN. Herein, we survey several training solutions proposed by different researchers to stabilize GAN training. We survey, (I) the original GAN model and its modified classical versions, (II) detail analysis of various GAN applications in different domains, (III) detail study about the various GAN training obstacles as well as training solutions. Finally, we discuss several new issues as well as research outlines to the topic.

cs.CV↗

Algorithm for Finding the Maximum Clique Based on Continuous Time Quantum Walk

In this work, we consider the application of continuous time quantum walking(CTQW) to the Maximum Clique(MC) Problem. Performing CTQW on graphs will generate distinct periodic probability amplitude for different vertices. We will show that the intensity of the probability amplitude at frequency indeed implies the clique structure of some special kinds of graph. And recursive algorithms with time complexity $O(N^5)$ in classical computers for finding the maximum clique are proposed. We have experimented on random graphs where each edge exists with probabilities 0.3, 0.5 and 0.7. Although counter examples are not found for random graphs, whether these algorithms are universal is not known to us.

cs.DS↗

Unsupervised segmentation via semantic-apparent feature fusion

Foreground segmentation is an essential task in the field of image understanding. Under unsupervised conditions, different images and instances always have variable expressions, which make it difficult to achieve stable segmentation performance based on fixed rules or single type of feature. In order to solve this problem, the research proposes an unsupervised foreground segmentation method based on semantic-apparent feature fusion (SAFF). Here, we found that key regions of foreground object can be accurately responded via semantic features, while apparent features (represented by saliency and edge) provide richer detailed expression. To combine the advantages of the two type of features, an encoding method for unary region features and binary context features is established, which realizes a comprehensive description of the two types of expressions. Then, a method for adaptive parameter learning is put forward to calculate the most suitable feature weights and generate foreground confidence score map. Furthermore, segmentation network is used to learn foreground common features from different instances. By fusing semantic and apparent features, as well as cascading the modules of intra-image adaptive feature weight learning and inter-image common feature learning, the research achieves performance that significantly exceeds baselines on the PASCAL VOC 2012 dataset.

cs.CV↗

Semantic Neighborhood-Aware Deep Facial Expression Recognition

Different from many other attributes, facial expression can change in a continuous way, and therefore, a slight semantic change of input should also lead to the output fluctuation limited in a small scale. This consistency is important. However, current Facial Expression Recognition (FER) datasets may have the extreme imbalance problem, as well as the lack of data and the excessive amounts of noise, hindering this consistency and leading to a performance decreasing when testing. In this paper, we not only consider the prediction accuracy on sample points, but also take the neighborhood smoothness of them into consideration, focusing on the stability of the output with respect to slight semantic perturbations of the input. A novel method is proposed to formulate semantic perturbation and select unreliable samples during training, reducing the bad effect of them. Experiments show the effectiveness of the proposed method and state-of-the-art results are reported, getting closer to an upper limit than the state-of-the-art methods by a factor of 30\% in AffectNet, the largest in-the-wild FER database by now.

cs.CV↗

Graph-guided Architecture Search for Real-time Semantic Segmentation

Designing a lightweight semantic segmentation network often requires researchers to find a trade-off between performance and speed, which is always empirical due to the limited interpretability of neural networks. In order to release researchers from these tedious mechanical trials, we propose a Graph-guided Architecture Search (GAS) pipeline to automatically search real-time semantic segmentation networks. Unlike previous works that use a simplified search space and stack a repeatable cell to form a network, we introduce a novel search mechanism with new search space where a lightweight model can be effectively explored through the cell-level diversity and latencyoriented constraint. Specifically, to produce the cell-level diversity, the cell-sharing constraint is eliminated through the cell-independent manner. Then a graph convolution network (GCN) is seamlessly integrated as a communication mechanism between cells. Finally, a latency-oriented constraint is endowed into the search process to balance the speed and performance. Extensive experiments on Cityscapes and CamVid datasets demonstrate that GAS achieves the new state-of-the-art trade-off between accuracy and speed. In particular, on Cityscapes dataset, GAS achieves the new best performance of 73.5% mIoU with speed of 108.4 FPS on Titan Xp.

cs.CV↗

Progressive Multi-Stage Learning for Discriminative Tracking

Visual tracking is typically solved as a discriminative learning problem that usually requires high-quality samples for online model adaptation. It is a critical and challenging problem to evaluate the training samples collected from previous predictions and employ sample selection by their quality to train the model. To tackle the above problem, we propose a joint discriminative learning scheme with the progressive multi-stage optimization policy of sample selection for robust visual tracking. The proposed scheme presents a novel time-weighted and detection-guided self-paced learning strategy for easy-to-hard sample selection, which is capable of tolerating relatively large intra-class variations while maintaining inter-class separability. Such a self-paced learning strategy is jointly optimized in conjunction with the discriminative tracking process, resulting in robust tracking results. Experiments on the benchmark datasets demonstrate the effectiveness of the proposed learning framework.

cs.CV↗

BANet: Bidirectional Aggregation Network with Occlusion Handling for Panoptic Segmentation

Panoptic segmentation aims to perform instance segmentation for foreground instances and semantic segmentation for background stuff simultaneously. The typical top-down pipeline concentrates on two key issues: 1) how to effectively model the intrinsic interaction between semantic segmentation and instance segmentation, and 2) how to properly handle occlusion for panoptic segmentation. Intuitively, the complementarity between semantic segmentation and instance segmentation can be leveraged to improve the performance. Besides, we notice that using detection/mask scores is insufficient for resolving the occlusion problem. Motivated by these observations, we propose a novel deep panoptic segmentation scheme based on a bidirectional learning pipeline. Moreover, we introduce a plug-and-play occlusion handling algorithm to deal with the occlusion between different object instances. The experimental results on COCO panoptic benchmark validate the effectiveness of our proposed method. Codes will be released soon at https://github.com/Mooonside/BANet.

cs.CV↗

Real-Time Semantic Segmentation via Auto Depth, Downsampling Joint Decision and Feature Aggregation

To satisfy the stringent requirements on computational resources in the field of real-time semantic segmentation, most approaches focus on the hand-crafted design of light-weight segmentation networks. Recently, Neural Architecture Search (NAS) has been used to search for the optimal building blocks of networks automatically, but the network depth, downsampling strategy, and feature aggregation way are still set in advance by trial and error. In this paper, we propose a joint search framework, called AutoRTNet, to automate the design of these strategies. Specifically, we propose hyper-cells to jointly decide the network depth and downsampling strategy, and an aggregation cell to achieve automatic multi-scale feature aggregation. Experimental results show that AutoRTNet achieves 73.9% mIoU on the Cityscapes test set and 110.0 FPS on an NVIDIA TitanXP GPU card with 768x1536 input images.

cs.CV↗

Realizing Pixel-Level Semantic Learning in Complex Driving Scenes based on Only One Annotated Pixel per Class

Semantic segmentation tasks based on weakly supervised condition have been put forward to achieve a lightweight labeling process. For simple images that only include a few categories, researches based on image-level annotations have achieved acceptable performance. However, when facing complex scenes, since image contains a large amount of classes, it becomes difficult to learn visual appearance based on image tags. In this case, image-level annotations are not effective in providing information. Therefore, we set up a new task in which only one annotated pixel is provided for each category. Based on the more lightweight and informative condition, a three step process is built for pseudo labels generation, which progressively implement optimal feature representation for each category, image inference and context-location based refinement. In particular, since high-level semantics and low-level imaging feature have different discriminative ability for each class under driving scenes, we divide each category into "object" or "scene" and then provide different operations for the two types separately. Further, an alternate iterative structure is established to gradually improve segmentation performance, which combines CNN-based inter-image common semantic learning and imaging prior based intra-image modification process. Experiments on Cityscapes dataset demonstrate that the proposed method provides a feasible way to solve weakly supervised semantic segmentation task under complex driving scenes.

cs.CV↗

Quantum approximate algorithm for NP optimization problems with constraints

The Quantum Approximate Optimization Algorithm (QAOA) is an algorithmic framework for finding approximate solutions to combinatorial optimization problems, derived from an approximation to the Quantum Adiabatic Algorithm (QAA). In solving combinatorial optimization problems with constraints in the context of QAOA or QAA, one needs to find a way to encode problem constraints into the scheme. In this paper, we formalize different constraint types to linear equalities, linear inequalities, and arbitrary form. Based on this, we propose constraint-encoding schemes well-fitting into the QAOA framework for solving NP combinatorial optimization problems. The implemented algorithms demonstrate the effectiveness and efficiency of the proposed scheme by the testing results of varied instances of some well-known NP optimization problems. We argue that our work leads to a generalized framework for finding, in the context of QAOA, high-quality approximate solutions to combinatorial problems with various types of constraints.

quant-ph↗