arXiv subjects

Xiancheng Zhang

Publications and source records attributed to Xiancheng Zhang.

2 recordsLinked to original sources

arXiv2026

BioProBench: A Corpus and Benchmark for Biological Protocol Reasoning in Autonomous Science

The realization of autonomous scientific experimentation is currently limited by LLMs' struggle to grasp the strict procedural logic and accuracy required by biological protocols. To address this fundamental challenge, we present \textbf{BioProBench}, a comprehensive resource for procedural reasoning in biology. BioProBench is grounded in \textbf{BioProCorpus}, a foundational collection of 22,413 human-written protocols. From this corpus, we systematically constructed a dataset of 523,784 task instances, offering both a large-scale training resource and a rigorous benchmark with novel metrics. Evaluating 10 mainstream LLMs, we find that while general comprehension is high, performance drops significantly on tasks demanding deep reasoning, quantitative precision, and safety awareness. To demonstrate the value of BioProCorpus in mitigating these issues, we developed \textbf{ProAgent}, grounded in our corpus, ProAgent substantially advances the state-of-the-art. https://github.com/YuyangSunshine/bioprobench and https://huggingface.co/BioProBench.

cs.CL↗

arXiv2020

Fifth-degree elastic potential for predictive stress-strain relations and elastic instabilities under large strain and complex loading in Si

Materials under complex loading develop large strains and often transition via an elastic instability, as observed in both simple and complex systems. Here, we present Si I under large strain in terms of Lagrangian strain by an $5^{th}$-order elastic potential found by minimizing error relative to density functional theory (DFT) results. The Cauchy stress-Lagrangian strain curves for arbitrary complex loadings are in excellent correspondence with DFT results, including elastic instability driving Si I$\rightarrow$II phase transformation (PT) and the shear instabilities. PT conditions for Si I$\rightarrow$II under action of cubic axial stresses are linear in Cauchy stresses in agreement with DFT predictions. Such elastic potential permits study of elastic instabilities and orientational dependence leading to different PTs, slip, twinning, or fracture, providing a fundamental basis for continuum simulations of crystal behavior under extreme loading.

cond-mat.mtrl-sci↗