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Xiangdong Wang

Publications and source records attributed to Xiangdong Wang.

At least 19 recordsLinked to original sources

PA-MIL: Phenotype-Aware Multiple Instance Learning Guided by Language Prompting and Genotype-to-Phenotype Relationships

Deep learning has been extensively researched in the analysis of pathology whole-slide images (WSIs). However, most existing methods are limited to providing prediction interpretability by locating the model's salient areas in a post-hoc manner, failing to offer more reliable and accountable explanations. In this work, we propose Phenotype-Aware Multiple Instance Learning (PA-MIL), a novel ante-hoc interpretable framework that identifies cancer-related phenotypes from WSIs and utilizes them for cancer subtyping. To facilitate PA-MIL in learning phenotype-aware features, we 1) construct a phenotype knowledge base containing cancer-related phenotypes and their associated genotypes. 2) utilize the morphological descriptions of phenotypes as language prompting to aggregate phenotype-related features. 3) devise the Genotype-to-Phenotype Neural Network (GP-NN) grounded in genotype-to-phenotype relationships, which provides multi-level guidance for PA-MIL. Experimental results on multiple datasets demonstrate that PA-MIL achieves competitive performance compared to existing MIL methods while offering improved interpretability. PA-MIL leverages phenotype saliency as evidence and, using a linear classifier, achieves competitive results compared to state-of-the-art methods. Additionally, we thoroughly analyze the genotype-phenotype relationships, as well as cohort-level and case-level interpretability, demonstrating the reliability and accountability of PA-MIL.

cs.LG

Listening Between the Frames: Bridging Temporal Gaps in Large Audio-Language Models

Recent Large Audio-Language Models (LALMs) exhibit impressive capabilities in understanding audio content for conversational QA tasks. However, these models struggle to accurately understand timestamps for temporal localization (e.g., Temporal Audio Grounding) and are restricted to short audio perception, leading to constrained capabilities on fine-grained tasks. We identify three key aspects that limit their temporal localization and long audio understanding: (i) timestamp representation, (ii) architecture, and (iii) data. To address this, we introduce TimeAudio, a novel method that empowers LALMs to connect their understanding of audio content with precise temporal perception. Specifically, we incorporate unique temporal markers to improve time-sensitive reasoning and apply an absolute time-aware encoding that explicitly grounds the acoustic features with absolute time information. Moreover, to achieve end-to-end long audio understanding, we introduce a segment-level token merging module to substantially reduce audio token redundancy and enhance the efficiency of information extraction. Due to the lack of suitable datasets and evaluation metrics, we consolidate existing audio datasets into a new dataset focused on temporal tasks and establish a series of metrics to evaluate the fine-grained performance. Evaluations show strong performance across a variety of fine-grained tasks, such as dense captioning, temporal grounding, and timeline speech summarization, demonstrating TimeAudio's robust temporal localization and reasoning capabilities.

cs.SD

Natural Selection via Foundation Models for Soft Robot Evolution

Designing soft robots is a complex and iterative process that demands cross-disciplinary expertise in materials science, mechanics, and control, often relying on intuition and extensive experimentation. While foundation models, especially Large Language Models (LLMs), have demonstrated impressive reasoning abilities, their capacity to conduct embodied design remains largely unexplored. This paper introduces RoboCrafter-QA, a novel benchmark to evaluate whether LLMs can learn representations of soft robot designs that effectively bridge the gap between high-level task descriptions and low-level morphological and material choices. RoboCrafter-QA leverages the EvoGym simulator to generate a diverse set of soft robot design challenges, spanning robotic locomotion, manipulation, and balancing tasks. Our experiments with SOTA multi-modal LLMs reveal that while these models exhibit promising capabilities in learning design representations, they struggle with fine-grained distinctions between designs with subtle performance differences. To overcome these limitations, we finetune an efficient, open-source LLM that achieves SOTA performance on our benchmark, demonstrating superior capabilities in both design selection and direct generation of high-performing robot morphologies. Furthermore, we construct a physical replica of the modular soft robot and demonstrate a strong sim-to-real correlation, validating that superior benchmark performance has the potential to translate to effective real-world design selection. Our full system will be open-sourced to foster this exciting direction.

cs.RO

Multi-topological phases of matter

The discovery of topological phases of matter and topological boundary states had tremendous impact on condensed matter physics and photonics, where topological phases are defined via energy bands, giving rise to topological band theory. However, topological systems that cannot be described by band topology but still support non-trivial boundary states are little-known and largely unexplored. Here, we uncover a new kind of topological phase of matter named "multi-topological phase" (MTP) that features multiple sets of boundary states, where each set is associated with one distinct topological invariant. Unlike conventional topological phase transitions, the MTP transitions can occur without band-gap closing. We present typical examples of MTPs in a one-dimensional topological insulator and a two-dimensional higher-order topological insulator, where the systems are otherwise trivial according to band topology. Furthermore, MTPs can exist also in indirectly gapped Chern insulators, beyond the regime where the conventional bulk-boundary correspondence predicts the existence of boundary states. Experimentally, we demonstrate the first two examples of MTPs in laser-written photonic lattices. Our findings constitute a fundamental advance in topological physics and provide a route for designing novel topological materials.

physics.optics

SCMIL: Sparse Context-aware Multiple Instance Learning for Predicting Cancer Survival Probability Distribution in Whole Slide Images

Cancer survival prediction is a challenging task that involves analyzing of the tumor microenvironment within Whole Slide Image (WSI). Previous methods cannot effectively capture the intricate interaction features among instances within the local area of WSI. Moreover, existing methods for cancer survival prediction based on WSI often fail to provide better clinically meaningful predictions. To overcome these challenges, we propose a Sparse Context-aware Multiple Instance Learning (SCMIL) framework for predicting cancer survival probability distributions. SCMIL innovatively segments patches into various clusters based on their morphological features and spatial location information, subsequently leveraging sparse self-attention to discern the relationships between these patches with a context-aware perspective. Considering many patches are irrelevant to the task, we introduce a learnable patch filtering module called SoftFilter, which ensures that only interactions between task-relevant patches are considered. To enhance the clinical relevance of our prediction, we propose a register-based mixture density network to forecast the survival probability distribution for individual patients. We evaluate SCMIL on two public WSI datasets from the The Cancer Genome Atlas (TCGA) specifically focusing on lung adenocarcinom (LUAD) and kidney renal clear cell carcinoma (KIRC). Our experimental results indicate that SCMIL outperforms current state-of-the-art methods for survival prediction, offering more clinically meaningful and interpretable outcomes. Our code is accessible at https://github.com/yang-ze-kang/SCMIL.

cs.CV

A Multimodal Object-level Contrast Learning Method for Cancer Survival Risk Prediction

Computer-aided cancer survival risk prediction plays an important role in the timely treatment of patients. This is a challenging weakly supervised ordinal regression task associated with multiple clinical factors involved such as pathological images, genomic data and etc. In this paper, we propose a new training method, multimodal object-level contrast learning, for cancer survival risk prediction. First, we construct contrast learning pairs based on the survival risk relationship among the samples in the training sample set. Then we introduce the object-level contrast learning method to train the survival risk predictor. We further extend it to the multimodal scenario by applying cross-modal constrast. Considering the heterogeneity of pathological images and genomics data, we construct a multimodal survival risk predictor employing attention-based and self-normalizing based nerural network respectively. Finally, the survival risk predictor trained by our proposed method outperforms state-of-the-art methods on two public multimodal cancer datasets for survival risk prediction.

cs.LG

Advancing Multi-grained Alignment for Contrastive Language-Audio Pre-training

Recent advances have been witnessed in audio-language joint learning, such as CLAP, that shows much success in multi-modal understanding tasks. These models usually aggregate uni-modal local representations, namely frame or word features, into global ones, on which the contrastive loss is employed to reach coarse-grained cross-modal alignment. However, frame-level correspondence with texts may be ignored, making it ill-posed on explainability and fine-grained challenges which may also undermine performances on coarse-grained tasks. In this work, we aim to improve both coarse- and fine-grained audio-language alignment in large-scale contrastive pre-training. To unify the granularity and latent distribution of two modalities, a shared codebook is adopted to represent multi-modal global features with common bases, and each codeword is regularized to encode modality-shared semantics, bridging the gap between frame and word features. Based on it, a locality-aware block is involved to purify local patterns, and a hard-negative guided loss is devised to boost alignment. Experiments on eleven zero-shot coarse- and fine-grained tasks suggest that our model not only surpasses the baseline CLAP significantly but also yields superior or competitive results compared to current SOTA works.

eess.AS

Leveraging Language Model Capabilities for Sound Event Detection

Large language models reveal deep comprehension and fluent generation in the field of multi-modality. Although significant advancements have been achieved in audio multi-modality, existing methods are rarely leverage language model for sound event detection (SED). In this work, we propose an end-to-end framework for understanding audio features while simultaneously generating sound event and their temporal location. Specifically, we employ pretrained acoustic models to capture discriminative features across different categories and language models for autoregressive text generation. Conventional methods generally struggle to obtain features in pure audio domain for classification. In contrast, our framework utilizes the language model to flexibly understand abundant semantic context aligned with the acoustic representation. The experimental results showcase the effectiveness of proposed method in enhancing timestamps precision and event classification.

cs.SD

Audio Generation with Multiple Conditional Diffusion Model

Text-based audio generation models have limitations as they cannot encompass all the information in audio, leading to restricted controllability when relying solely on text. To address this issue, we propose a novel model that enhances the controllability of existing pre-trained text-to-audio models by incorporating additional conditions including content (timestamp) and style (pitch contour and energy contour) as supplements to the text. This approach achieves fine-grained control over the temporal order, pitch, and energy of generated audio. To preserve the diversity of generation, we employ a trainable control condition encoder that is enhanced by a large language model and a trainable Fusion-Net to encode and fuse the additional conditions while keeping the weights of the pre-trained text-to-audio model frozen. Due to the lack of suitable datasets and evaluation metrics, we consolidate existing datasets into a new dataset comprising the audio and corresponding conditions and use a series of evaluation metrics to evaluate the controllability performance. Experimental results demonstrate that our model successfully achieves fine-grained control to accomplish controllable audio generation. Audio samples and our dataset are publicly available at https://conditionaudiogen.github.io/conditionaudiogen/

cs.SD

Frame Pairwise Distance Loss for Weakly-supervised Sound Event Detection

Weakly-supervised learning has emerged as a promising approach to leverage limited labeled data in various domains by bridging the gap between fully supervised methods and unsupervised techniques. Acquisition of strong annotations for detecting sound events is prohibitively expensive, making weakly supervised learning a more cost-effective and broadly applicable alternative. In order to enhance the recognition rate of the learning of detection of weakly-supervised sound events, we introduce a Frame Pairwise Distance (FPD) loss branch, complemented with a minimal amount of synthesized data. The corresponding sampling and label processing strategies are also proposed. Two distinct distance metrics are employed to evaluate the proposed approach. Finally, the method is validated on the DCASE 2023 task4 dataset. The obtained experimental results corroborated the efficacy of this approach.

cs.HC

Semi-supervised Sound Event Detection with Local and Global Consistency Regularization

Learning meaningful frame-wise features on a partially labeled dataset is crucial to semi-supervised sound event detection. Prior works either maintain consistency on frame-level predictions or seek feature-level similarity among neighboring frames, which cannot exploit the potential of unlabeled data. In this work, we design a Local and Global Consistency (LGC) regularization scheme to enhance the model on both label- and feature-level. The audio CutMix is introduced to change the contextual information of clips. Then, the local consistency is adopted to encourage the model to leverage local features for frame-level predictions, and the global consistency is applied to force features to align with global prototypes through a specially designed contrastive loss. Experiments on the DESED dataset indicate the superiority of LGC, surpassing its respective competitors largely with the same settings as the baseline system. Besides, combining LGC with existing methods can obtain further improvements. The code will be released soon.

eess.AS

Audio-free Prompt Tuning for Language-Audio Models

Contrastive Language-Audio Pretraining (CLAP) is pre-trained to associate audio features with human language, making it a natural zero-shot classifier to recognize unseen sound categories. To adapt CLAP to downstream tasks, prior works inevitably require labeled domain audios, which limits their scalability under data scarcity and deprives them of the capability to detect novel classes as the original CLAP. In this work, by leveraging the modality alignment in CLAP, we propose an efficient audio-free prompt tuning scheme aimed at optimizing a few prompt tokens from texts instead of audios, which regularizes the model space to avoid overfitting the seen classes as well. Based on this, a multi-grained prompt design is further explored to fuse global and local information. Experiments on several tasks demonstrate that our approach can boost the CLAP and outperform other training methods on model performance and training efficiency. While conducting zero-shot inference on unseen categories, it still shows better transferability than the vanilla CLAP. Moreover, our method is flexible enough even if only knowing the downstream class names. The code will be released soon.

eess.AS

Compact Twice Fusion Network for Edge Detection

The significance of multi-scale features has been gradually recognized by the edge detection community. However, the fusion of multi-scale features increases the complexity of the model, which is not friendly to practical application. In this work, we propose a Compact Twice Fusion Network (CTFN) to fully integrate multi-scale features while maintaining the compactness of the model. CTFN includes two lightweight multi-scale feature fusion modules: a Semantic Enhancement Module (SEM) that can utilize the semantic information contained in coarse-scale features to guide the learning of fine-scale features, and a Pseudo Pixel-level Weighting (PPW) module that aggregate the complementary merits of multi-scale features by assigning weights to all features. Notwithstanding all this, the interference of texture noise makes the correct classification of some pixels still a challenge. For these hard samples, we propose a novel loss function, coined Dynamic Focal Loss, which reshapes the standard cross-entropy loss and dynamically adjusts the weights to correct the distribution of hard samples. We evaluate our method on three datasets, i.e., BSDS500, NYUDv2, and BIPEDv2. Compared with state-of-the-art methods, CTFN achieves competitive accuracy with less parameters and computational cost. Apart from the backbone, CTFN requires only 0.1M additional parameters, which reduces its computation cost to just 60% of other state-of-the-art methods. The codes are available at https://github.com/Li-yachuan/CTFN-pytorch-master.

cs.CV

Topologically protected vortex transport via chiral-symmetric disclination

Vortex phenomena are ubiquitous in nature, from vortices of quantum particles and living cells [1-7], to whirlpools, tornados, and spiral galaxies. Yet, effective control of vortex transport from one place to another at any scale has thus far remained a challenging goal. Here, by use of topological disclination [8,9], we demonstrate a scheme to confine and guide vortices of arbitrary high-order charges10,11. Such guidance demands a double topological protection: a nontrivial winding in momentum space due to chiral symmetry [12,13] and a nontrivial winding in real space arising from collective complex coupling between vortex modes. We unveil a vorticity-coordinated rotational symmetry, which sets up a universal relation between the topological charge of a guided vortex and the order of rotational symmetry of the disclination structure. As an example, we construct a C3-symmetry photonic lattice with a single-core disclination, thereby achieving robust transport of an optical vortex with preserved orbital angular momentum (OAM) that corresponds solely to one excited vortex mode pinned at zero energy. Our work reveals a fundamental interplay of vorticity, disclination and higher-order topological phases14-16, applicable broadly to different fields, promising in particular for OAM-based photonic applications that require vortex guides, fibers [17,18] and lasers [19].

physics.optics

A Hybrid System of Sound Event Detection Transformer and Frame-wise Model for DCASE 2022 Task 4

In this paper, we describe in detail our system for DCASE 2022 Task4. The system combines two considerably different models: an end-to-end Sound Event Detection Transformer (SEDT) and a frame-wise model, Metric Learning and Focal Loss CNN (MLFL-CNN). The former is an event-wise model which learns event-level representations and predicts sound event categories and boundaries directly, while the latter is based on the widely adopted frame-classification scheme, under which each frame is classified into event categories and event boundaries are obtained by post-processing such as thresholding and smoothing. For SEDT, self-supervised pre-training using unlabeled data is applied, and semi-supervised learning is adopted by using an online teacher, which is updated from the student model using the Exponential Moving Average (EMA) strategy and generates reliable pseudo labels for weakly-labeled and unlabeled data. For the frame-wise model, the ICT-TOSHIBA system of DCASE 2021 Task 4 is used. Experimental results show that the hybrid system considerably outperforms either individual model and achieves psds1 of 0.420 and psds2 of 0.783 on the validation set without external data. The code is available at https://github.com/965694547/Hybrid-system-of-frame-wise-model-and-SEDT.

cs.SD

Photonic p-orbital higher-order topological insulators

The orbital degrees of freedom play a pivotal role in understanding fundamental phenomena in solid-state materials as well as exotic quantum states of matter including orbital superfluidity and topological semimetals. Despite tremendous efforts in engineering synthetic cold-atom, electronic and photonic lattices to explore orbital physics, thus far high orbitals in an important class of materials, namely, the higher-order topological insulators (HOTIs), have not been realized. Here, we demonstrate p-orbital corner states in a photonic HOTI, unveiling their underlying topological invariant, symmetry protection, and nonlinearity-induced dynamical rotation. In a Kagome-type HOTI, we find that topological protection of the p-orbital corner states demands an orbital-hopping symmetry, in addition to the generalized chiral symmetry. Due to orbital hybridization, the nontrivial topology of the p-orbital HOTI is hidden if bulk polarization is used as the topological invariant, but well manifested by the generalized winding number. Our work opens a pathway for the exploration of intriguing orbital phenomena mediated by higher band topology applicable to a broad spectrum of systems.

physics.optics

Sub-symmetry protected topological states

A hallmark of symmetry-protected topological phases (SPTs) are topologically protected boundary states, which are immune to perturbations that respect the protecting symmetry. It is commonly believed that any perturbation that destroys an SPT phase simultaneously destroys the boundary states. However, by introducing and exploring a weaker sub-symmetry (SubSy) requirement on perturbations, we find that the nature of boundary state protection is in fact more complex. We demonstrate that the boundary states are protected by only the SubSy using prototypical Su-Schrieffer-Heeger (SSH) and breathing Kagome lattice (BKL) models, even though the overall topological invariant and the SPT phase are destroyed by SubSy preserving perturbations. By employing judiciously controlled symmetry breaking in photonic lattices, we experimentally demonstrate such SubSy protection of topological states. Furthermore, we introduce a long-range hopping symmetry in BKLs, which resolves a debate on the topological nature of their corner states. Our results apply to other systems beyond photonics, heralding the possibility of exploring the intriguing properties of SPT phases in the absence of full symmetry in different physical contexts.

physics.optics

SP-SEDT: Self-supervised Pre-training for Sound Event Detection Transformer

Recently, an event-based end-to-end model (SEDT) has been proposed for sound event detection (SED) and achieves competitive performance. However, compared with the frame-based model, it requires more training data with temporal annotations to improve the localization ability. Synthetic data is an alternative, but it suffers from a great domain gap with real recordings. Inspired by the great success of UP-DETR in object detection, we propose to self-supervisedly pre-train SEDT (SP-SEDT) by detecting random patches (only cropped along the time axis). Experiments on the DCASE2019 task4 dataset show the proposed SP-SEDT can outperform fine-tuned frame-based model. The ablation study is also conducted to investigate the impact of different loss functions and patch size.

cs.SD