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Xiaofeng He

Publications and source records attributed to Xiaofeng He.

43 records · Page 3Linked to original sources

SMedBERT: A Knowledge-Enhanced Pre-trained Language Model with Structured Semantics for Medical Text Mining

Recently, the performance of Pre-trained Language Models (PLMs) has been significantly improved by injecting knowledge facts to enhance their abilities of language understanding. For medical domains, the background knowledge sources are especially useful, due to the massive medical terms and their complicated relations are difficult to understand in text. In this work, we introduce SMedBERT, a medical PLM trained on large-scale medical corpora, incorporating deep structured semantic knowledge from neighbors of linked-entity.In SMedBERT, the mention-neighbor hybrid attention is proposed to learn heterogeneous-entity information, which infuses the semantic representations of entity types into the homogeneous neighboring entity structure. Apart from knowledge integration as external features, we propose to employ the neighbors of linked-entities in the knowledge graph as additional global contexts of text mentions, allowing them to communicate via shared neighbors, thus enrich their semantic representations. Experiments demonstrate that SMedBERT significantly outperforms strong baselines in various knowledge-intensive Chinese medical tasks. It also improves the performance of other tasks such as question answering, question matching and natural language inference.

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HMRL: Hyper-Meta Learning for Sparse Reward Reinforcement Learning Problem

In spite of the success of existing meta reinforcement learning methods, they still have difficulty in learning a meta policy effectively for RL problems with sparse reward. In this respect, we develop a novel meta reinforcement learning framework called Hyper-Meta RL(HMRL), for sparse reward RL problems. It is consisted with three modules including the cross-environment meta state embedding module which constructs a common meta state space to adapt to different environments; the meta state based environment-specific meta reward shaping which effectively extends the original sparse reward trajectory by cross-environmental knowledge complementarity and as a consequence the meta policy achieves better generalization and efficiency with the shaped meta reward. Experiments with sparse-reward environments show the superiority of HMRL on both transferability and policy learning efficiency.

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TCL: Transformer-based Dynamic Graph Modelling via Contrastive Learning

Dynamic graph modeling has recently attracted much attention due to its extensive applications in many real-world scenarios, such as recommendation systems, financial transactions, and social networks. Although many works have been proposed for dynamic graph modeling in recent years, effective and scalable models are yet to be developed. In this paper, we propose a novel graph neural network approach, called TCL, which deals with the dynamically-evolving graph in a continuous-time fashion and enables effective dynamic node representation learning that captures both the temporal and topology information. Technically, our model contains three novel aspects. First, we generalize the vanilla Transformer to temporal graph learning scenarios and design a graph-topology-aware transformer. Secondly, on top of the proposed graph transformer, we introduce a two-stream encoder that separately extracts representations from temporal neighborhoods associated with the two interaction nodes and then utilizes a co-attentional transformer to model inter-dependencies at a semantic level. Lastly, we are inspired by the recently developed contrastive learning and propose to optimize our model by maximizing mutual information (MI) between the predictive representations of two future interaction nodes. Benefiting from this, our dynamic representations can preserve high-level (or global) semantics about interactions and thus is robust to noisy interactions. To the best of our knowledge, this is the first attempt to apply contrastive learning to representation learning on dynamic graphs. We evaluate our model on four benchmark datasets for interaction prediction and experiment results demonstrate the superiority of our model.

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KEML: A Knowledge-Enriched Meta-Learning Framework for Lexical Relation Classification

Lexical relations describe how concepts are semantically related, in the form of relation triples. The accurate prediction of lexical relations between concepts is challenging, due to the sparsity of patterns indicating the existence of such relations. We propose the Knowledge-Enriched Meta-Learning (KEML) framework to address the task of lexical relation classification. In KEML, the LKB-BERT (Lexical Knowledge Base-BERT) model is presented to learn concept representations from massive text corpora, with rich lexical knowledge injected by distant supervision. A probabilistic distribution of auxiliary tasks is defined to increase the model's ability to recognize different types of lexical relations. We further combine a meta-learning process over the auxiliary task distribution and supervised learning to train the neural lexical relation classifier. Experiments over multiple datasets show that KEML outperforms state-of-the-art methods.

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Meta Fine-Tuning Neural Language Models for Multi-Domain Text Mining

Pre-trained neural language models bring significant improvement for various NLP tasks, by fine-tuning the models on task-specific training sets. During fine-tuning, the parameters are initialized from pre-trained models directly, which ignores how the learning process of similar NLP tasks in different domains is correlated and mutually reinforced. In this paper, we propose an effective learning procedure named Meta Fine-Tuning (MFT), served as a meta-learner to solve a group of similar NLP tasks for neural language models. Instead of simply multi-task training over all the datasets, MFT only learns from typical instances of various domains to acquire highly transferable knowledge. It further encourages the language model to encode domain-invariant representations by optimizing a series of novel domain corruption loss functions. After MFT, the model can be fine-tuned for each domain with better parameter initializations and higher generalization ability. We implement MFT upon BERT to solve several multi-domain text mining tasks. Experimental results confirm the effectiveness of MFT and its usefulness for few-shot learning.

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Learning Robust Representations with Graph Denoising Policy Network

Graph representation learning, aiming to learn low-dimensional representations which capture the geometric dependencies between nodes in the original graph, has gained increasing popularity in a variety of graph analysis tasks, including node classification and link prediction. Existing representation learning methods based on graph neural networks and their variants rely on the aggregation of neighborhood information, which makes it sensitive to noises in the graph. In this paper, we propose Graph Denoising Policy Network (short for GDPNet) to learn robust representations from noisy graph data through reinforcement learning. GDPNet first selects signal neighborhoods for each node, and then aggregates the information from the selected neighborhoods to learn node representations for the down-stream tasks. Specifically, in the signal neighborhood selection phase, GDPNet optimizes the neighborhood for each target node by formulating the process of removing noisy neighborhoods as a Markov decision process and learning a policy with task-specific rewards received from the representation learning phase. In the representation learning phase, GDPNet aggregates features from signal neighbors to generate node representations for down-stream tasks, and provides task-specific rewards to the signal neighbor selection phase. These two phases are jointly trained to select optimal sets of neighbors for target nodes with maximum cumulative task-specific rewards, and to learn robust representations for nodes. Experimental results on node classification task demonstrate the effectiveness of GDNet, outperforming the state-of-the-art graph representation learning methods on several well-studied datasets. Additionally, GDPNet is mathematically equivalent to solving the submodular maximizing problem, which theoretically guarantees the best approximation to the optimal solution with GDPNet.

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Supervised Reinforcement Learning with Recurrent Neural Network for Dynamic Treatment Recommendation

Dynamic treatment recommendation systems based on large-scale electronic health records (EHRs) become a key to successfully improve practical clinical outcomes. Prior relevant studies recommend treatments either use supervised learning (e.g. matching the indicator signal which denotes doctor prescriptions), or reinforcement learning (e.g. maximizing evaluation signal which indicates cumulative reward from survival rates). However, none of these studies have considered to combine the benefits of supervised learning and reinforcement learning. In this paper, we propose Supervised Reinforcement Learning with Recurrent Neural Network (SRL-RNN), which fuses them into a synergistic learning framework. Specifically, SRL-RNN applies an off-policy actor-critic framework to handle complex relations among multiple medications, diseases and individual characteristics. The "actor" in the framework is adjusted by both the indicator signal and evaluation signal to ensure effective prescription and low mortality. RNN is further utilized to solve the Partially-Observed Markov Decision Process (POMDP) problem due to the lack of fully observed states in real world applications. Experiments on the publicly real-world dataset, i.e., MIMIC-3, illustrate that our model can reduce the estimated mortality, while providing promising accuracy in matching doctors' prescriptions.

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