arXiv subjects

Xiaofeng Liu

Publications and source records attributed to Xiaofeng Liu.

At least 145 records · Page 8Linked to original sources

arXiv2022

Self-semantic contour adaptation for cross modality brain tumor segmentation

Unsupervised domain adaptation (UDA) between two significantly disparate domains to learn high-level semantic alignment is a crucial yet challenging task.~To this end, in this work, we propose exploiting low-level edge information to facilitate the adaptation as a precursor task, which has a small cross-domain gap, compared with semantic segmentation.~The precise contour then provides spatial information to guide the semantic adaptation. More specifically, we propose a multi-task framework to learn a contouring adaptation network along with a semantic segmentation adaptation network, which takes both magnetic resonance imaging (MRI) slice and its initial edge map as input.~These two networks are jointly trained with source domain labels, and the feature and edge map level adversarial learning is carried out for cross-domain alignment. In addition, self-entropy minimization is incorporated to further enhance segmentation performance. We evaluated our framework on the BraTS2018 database for cross-modality segmentation of brain tumors, showing the validity and superiority of our approach, compared with competing methods.

cs.CV↗

arXiv2021

TPPO: A Novel Trajectory Predictor with Pseudo Oracle

Forecasting pedestrian trajectories in dynamic scenes remains a critical problem in various applications, such as autonomous driving and socially aware robots. Such forecasting is challenging due to human-human and human-object interactions and future uncertainties caused by human randomness. Generative model-based methods handle future uncertainties by sampling a latent variable. However, few studies explored the generation of the latent variable. In this work, we propose the Trajectory Predictor with Pseudo Oracle (TPPO), which is a generative model-based trajectory predictor. The first pseudo oracle is pedestrians' moving directions, and the second one is the latent variable estimated from ground truth trajectories. A social attention module is used to aggregate neighbors' interactions based on the correlation between pedestrians' moving directions and future trajectories. This correlation is inspired by the fact that pedestrians' future trajectories are often influenced by pedestrians in front. A latent variable predictor is proposed to estimate latent variable distributions from observed and ground-truth trajectories. Moreover, the gap between these two distributions is minimized during training. Therefore, the latent variable predictor can estimate the latent variable from observed trajectories to approximate that estimated from ground-truth trajectories. We compare the performance of TPPO with related methods on several public datasets. Results demonstrate that TPPO outperforms state-of-the-art methods with low average and final displacement errors. The ablation study shows that the prediction performance will not dramatically decrease as sampling times decline during tests.

cs.CV↗

arXiv2021

Surrogate Model for Shallow Water Equations Solvers with Deep Learning

Shallow water equations are the foundation of most models for flooding and river hydraulics analysis. These physics-based models are usually expensive and slow to run, thus not suitable for real-time prediction or parameter inversion. An attractive alternative is surrogate model. This work introduces an efficient, accurate, and flexible surrogate model, NN-p2p, based on deep learning and it can make point-to-point predictions on unstructured or irregular meshes. The new method was evaluated and compared against existing methods based on convolutional neural networks (CNNs), which can only make image-to-image predictions on structured or regular meshes. In NN-p2p, the input includes both spatial coordinates and boundary features that can describe the geometry of hydraulic structures, such as bridge piers. All surrogate models perform well in predicting flow around different types of piers in the training domain. However, only NN-p2p works well when spatial extrapolation is performed. The limitations of CNN-based methods are rooted in their raster-image nature which cannot capture boundary geometry and flow features exactly, which are of paramount importance to fluid dynamics. NN-p2p also has good performance in predicting flow around piers unseen by the neural network. The NN-p2p model also respects conservation laws more strictly. The application of the proposed surrogate model was demonstrated by calculating the drag coefficient $C_D$ for piers and a new linear relationship between $C_D$ and the logarithmic transformation of pier's length/width ratio was discovered.

physics.flu-dyn↗

arXiv2021

Structured Directional Pruning via Perturbation Orthogonal Projection

Structured pruning is an effective compression technique to reduce the computation of neural networks, which is usually achieved by adding perturbations to reduce network parameters at the cost of slightly increasing training loss. A more reasonable approach is to find a sparse minimizer along the flat minimum valley found by optimizers, i.e. stochastic gradient descent, which keeps the training loss constant. To achieve this goal, we propose the structured directional pruning based on orthogonal projecting the perturbations onto the flat minimum valley. We also propose a fast solver sDprun and further prove that it achieves directional pruning asymptotically after sufficient training. Experiments using VGG-Net and ResNet on CIFAR-10 and CIFAR-100 datasets show that our method obtains the state-of-the-art pruned accuracy (i.e. 93.97% on VGG16, CIFAR-10 task) without retraining. Experiments using DNN, VGG-Net and WRN28X10 on MNIST, CIFAR-10 and CIFAR-100 datasets demonstrate our method performs structured directional pruning, reaching the same minimum valley as the optimizer.

cs.LG↗

arXiv2021

PNS: Population-Guided Novelty Search for Reinforcement Learning in Hard Exploration Environments

Reinforcement Learning (RL) has made remarkable achievements, but it still suffers from inadequate exploration strategies, sparse reward signals, and deceptive reward functions. To alleviate these problems, a Population-guided Novelty Search (PNS) parallel learning method is proposed in this paper. In PNS, the population is divided into multiple sub-populations, each of which has one chief agent and several exploring agents. The chief agent evaluates the policies learned by exploring agents and shares the optimal policy with all sub-populations. The exploring agents learn their policies in collaboration with the guidance of the optimal policy and, simultaneously, upload their policies to the chief agent. To balance exploration and exploitation, the Novelty Search (NS) is employed in every chief agent to encourage policies with high novelty while maximizing per-episode performance. We apply PNS to the twin delayed deep deterministic (TD3) policy gradient algorithm. The effectiveness of PNS to promote exploration and improve performance in continuous control domains is demonstrated in the experimental section. Notably, PNS-TD3 achieves rewards that far exceed the SOTA methods in environments with sparse or delayed reward signals. We also demonstrate that PNS enables robotic agents to learn control policies directly from pixels for sparse-reward manipulation in both simulated and real-world settings.

cs.LG↗

arXiv2021

Deep learning-based GTV contouring modeling inter- and intra- observer variability in sarcomas

Background and purpose: The delineation of the gross tumor volume (GTV) is a critical step for radiation therapy treatment planning. The delineation procedure is typically performed manually which exposes two major issues: cost and reproducibility. Delineation is a time-consuming process that is subject to inter- and intra-observer variability. While methods have been proposed to predict GTV contours, typical approaches ignore variability and therefore fail to utilize the valuable confidence information offered by multiple contours. Materials and methods: In this work we propose an automatic GTV contouring method for soft-tissue sarcomas from X-ray computed tomography (CT) images, using deep learning by integrating inter- and intra-observer variability in the learned model. Sixty-eight patients with soft tissue and bone sarcomas were considered in this evaluation, all underwent pre-operative CT imaging used to perform GTV delineation. Four radiation oncologists and radiologists performed three contouring trials each for all patients. We quantify variability by defining confidence levels based on the frequency of inclusion of a given voxel into the GTV and use a deep convolutional neural network to learn GTV confidence maps. Results: Results were compared to confidence maps from the four readers as well as ground-truth consensus contours established jointly by all readers. The resulting continuous Dice score between predicted and true confidence maps was 87% and the Hausdorff distance was 14 mm. Conclusion: Results demonstrate the ability of the proposed method to predict accurate contours while utilizing variability and as such it can be used to improve clinical workflow.

physics.med-ph↗

arXiv2021

Recursively Conditional Gaussian for Ordinal Unsupervised Domain Adaptation

The unsupervised domain adaptation (UDA) has been widely adopted to alleviate the data scalability issue, while the existing works usually focus on classifying independently discrete labels. However, in many tasks (e.g., medical diagnosis), the labels are discrete and successively distributed. The UDA for ordinal classification requires inducing non-trivial ordinal distribution prior to the latent space. Target for this, the partially ordered set (poset) is defined for constraining the latent vector. Instead of the typically i.i.d. Gaussian latent prior, in this work, a recursively conditional Gaussian (RCG) set is adapted for ordered constraint modeling, which admits a tractable joint distribution prior. Furthermore, we are able to control the density of content vector that violates the poset constraints by a simple "three-sigma rule". We explicitly disentangle the cross-domain images into a shared ordinal prior induced ordinal content space and two separate source/target ordinal-unrelated spaces, and the self-training is worked on the shared space exclusively for ordinal-aware domain alignment. Extensive experiments on UDA medical diagnoses and facial age estimation demonstrate its effectiveness.

cs.CV↗

arXiv2021

Adversarial Unsupervised Domain Adaptation with Conditional and Label Shift: Infer, Align and Iterate

In this work, we propose an adversarial unsupervised domain adaptation (UDA) approach with the inherent conditional and label shifts, in which we aim to align the distributions w.r.t. both $p(x|y)$ and $p(y)$. Since the label is inaccessible in the target domain, the conventional adversarial UDA assumes $p(y)$ is invariant across domains, and relies on aligning $p(x)$ as an alternative to the $p(x|y)$ alignment. To address this, we provide a thorough theoretical and empirical analysis of the conventional adversarial UDA methods under both conditional and label shifts, and propose a novel and practical alternative optimization scheme for adversarial UDA. Specifically, we infer the marginal $p(y)$ and align $p(x|y)$ iteratively in the training, and precisely align the posterior $p(y|x)$ in testing. Our experimental results demonstrate its effectiveness on both classification and segmentation UDA, and partial UDA.

cs.CV↗

arXiv2021

Deep 3D-CNN for Depression Diagnosis with Facial Video Recording of Self-Rating Depression Scale Questionnaire

The Self-Rating Depression Scale (SDS) questionnaire is commonly utilized for effective depression preliminary screening. The uncontrolled self-administered measure, on the other hand, maybe readily influenced by insouciant or dishonest responses, yielding different findings from the clinician-administered diagnostic. Facial expression (FE) and behaviors are important in clinician-administered assessments, but they are underappreciated in self-administered evaluations. We use a new dataset of 200 participants to demonstrate the validity of self-rating questionnaires and their accompanying question-by-question video recordings in this study. We offer an end-to-end system to handle the face video recording that is conditioned on the questionnaire answers and the responding time to automatically interpret sadness from the SDS assessment and the associated video. We modified a 3D-CNN for temporal feature extraction and compared various state-of-the-art temporal modeling techniques. The superior performance of our system shows the validity of combining facial video recording with the SDS score for more accurate self-diagnose.

cs.CV↗

arXiv2021

Segmentation of Cardiac Structures via Successive Subspace Learning with Saab Transform from Cine MRI

Assessment of cardiovascular disease (CVD) with cine magnetic resonance imaging (MRI) has been used to non-invasively evaluate detailed cardiac structure and function. Accurate segmentation of cardiac structures from cine MRI is a crucial step for early diagnosis and prognosis of CVD, and has been greatly improved with convolutional neural networks (CNN). There, however, are a number of limitations identified in CNN models, such as limited interpretability and high complexity, thus limiting their use in clinical practice. In this work, to address the limitations, we propose a lightweight and interpretable machine learning model, successive subspace learning with the subspace approximation with adjusted bias (Saab) transform, for accurate and efficient segmentation from cine MRI. Specifically, our segmentation framework is comprised of the following steps: (1) sequential expansion of near-to-far neighborhood at different resolutions; (2) channel-wise subspace approximation using the Saab transform for unsupervised dimension reduction; (3) class-wise entropy guided feature selection for supervised dimension reduction; (4) concatenation of features and pixel-wise classification with gradient boost; and (5) conditional random field for post-processing. Experimental results on the ACDC 2017 segmentation database, showed that our framework performed better than state-of-the-art U-Net models with 200$\times$ fewer parameters in delineating the left ventricle, right ventricle, and myocardium, thus showing its potential to be used in clinical practice.

eess.IV↗

arXiv2021

Domain Generalization under Conditional and Label Shifts via Variational Bayesian Inference

In this work, we propose a domain generalization (DG) approach to learn on several labeled source domains and transfer knowledge to a target domain that is inaccessible in training. Considering the inherent conditional and label shifts, we would expect the alignment of $p(x|y)$ and $p(y)$. However, the widely used domain invariant feature learning (IFL) methods relies on aligning the marginal concept shift w.r.t. $p(x)$, which rests on an unrealistic assumption that $p(y)$ is invariant across domains. We thereby propose a novel variational Bayesian inference framework to enforce the conditional distribution alignment w.r.t. $p(x|y)$ via the prior distribution matching in a latent space, which also takes the marginal label shift w.r.t. $p(y)$ into consideration with the posterior alignment. Extensive experiments on various benchmarks demonstrate that our framework is robust to the label shift and the cross-domain accuracy is significantly improved, thereby achieving superior performance over the conventional IFL counterparts.

cs.LG↗

arXiv2021

Interpreting Depression From Question-wise Long-term Video Recording of SDS Evaluation

Self-Rating Depression Scale (SDS) questionnaire has frequently been used for efficient depression preliminary screening. However, the uncontrollable self-administered measure can be easily affected by insouciantly or deceptively answering, and producing the different results with the clinician-administered Hamilton Depression Rating Scale (HDRS) and the final diagnosis. Clinically, facial expression (FE) and actions play a vital role in clinician-administered evaluation, while FE and action are underexplored for self-administered evaluations. In this work, we collect a novel dataset of 200 subjects to evidence the validity of self-rating questionnaires with their corresponding question-wise video recording. To automatically interpret depression from the SDS evaluation and the paired video, we propose an end-to-end hierarchical framework for the long-term variable-length video, which is also conditioned on the questionnaire results and the answering time. Specifically, we resort to a hierarchical model which utilizes a 3D CNN for local temporal pattern exploration and a redundancy-aware self-attention (RAS) scheme for question-wise global feature aggregation. Targeting for the redundant long-term FE video processing, our RAS is able to effectively exploit the correlations of each video clip within a question set to emphasize the discriminative information and eliminate the redundancy based on feature pair-wise affinity. Then, the question-wise video feature is concatenated with the questionnaire scores for final depression detection. Our thorough evaluations also show the validity of fusing SDS evaluation and its video recording, and the superiority of our framework to the conventional state-of-the-art temporal modeling methods.

cs.CV↗

arXiv2021

Adapting Off-the-Shelf Source Segmenter for Target Medical Image Segmentation

Unsupervised domain adaptation (UDA) aims to transfer knowledge learned from a labeled source domain to an unlabeled and unseen target domain, which is usually trained on data from both domains. Access to the source domain data at the adaptation stage, however, is often limited, due to data storage or privacy issues. To alleviate this, in this work, we target source free UDA for segmentation, and propose to adapt an ``off-the-shelf" segmentation model pre-trained in the source domain to the target domain, with an adaptive batch-wise normalization statistics adaptation framework. Specifically, the domain-specific low-order batch statistics, i.e., mean and variance, are gradually adapted with an exponential momentum decay scheme, while the consistency of domain shareable high-order batch statistics, i.e., scaling and shifting parameters, is explicitly enforced by our optimization objective. The transferability of each channel is adaptively measured first from which to balance the contribution of each channel. Moreover, the proposed source free UDA framework is orthogonal to unsupervised learning methods, e.g., self-entropy minimization, which can thus be simply added on top of our framework. Extensive experiments on the BraTS 2018 database show that our source free UDA framework outperformed existing source-relaxed UDA methods for the cross-subtype UDA segmentation task and yielded comparable results for the cross-modality UDA segmentation task, compared with a supervised UDA methods with the source data.

cs.CV↗

arXiv2021

Generative Self-training for Cross-domain Unsupervised Tagged-to-Cine MRI Synthesis

Self-training based unsupervised domain adaptation (UDA) has shown great potential to address the problem of domain shift, when applying a trained deep learning model in a source domain to unlabeled target domains. However, while the self-training UDA has demonstrated its effectiveness on discriminative tasks, such as classification and segmentation, via the reliable pseudo-label selection based on the softmax discrete histogram, the self-training UDA for generative tasks, such as image synthesis, is not fully investigated. In this work, we propose a novel generative self-training (GST) UDA framework with continuous value prediction and regression objective for cross-domain image synthesis. Specifically, we propose to filter the pseudo-label with an uncertainty mask, and quantify the predictive confidence of generated images with practical variational Bayes learning. The fast test-time adaptation is achieved by a round-based alternative optimization scheme. We validated our framework on the tagged-to-cine magnetic resonance imaging (MRI) synthesis problem, where datasets in the source and target domains were acquired from different scanners or centers. Extensive validations were carried out to verify our framework against popular adversarial training UDA methods. Results show that our GST, with tagged MRI of test subjects in new target domains, improved the synthesis quality by a large margin, compared with the adversarial training UDA methods.

cs.CV↗

arXiv2021

AI Enlightens Wireless Communication: Analyses, Solutions and Opportunities on CSI Feedback

In this paper, we give a systematic description of the 1st Wireless Communication Artificial Intelligence (AI) Competition (WAIC) which is hosted by IMT-2020(5G) Promotion Group 5G+AI Work Group. Firstly, the framework of full channel state information (F-CSI) feedback problem and its corresponding channel dataset are provided. Then the enhancing schemes for DL-based F-CSI feedback including i) channel data analysis and preprocessing, ii) neural network design and iii) quantization enhancement are elaborated. The final competition results composed of different enhancing schemes are presented. Based on the valuable experience of 1st WAIC, we also list some challenges and potential study areas for the design of AI-based wireless communication systems.

eess.SP↗

arXiv2021

Mutual Information Regularized Identity-aware Facial ExpressionRecognition in Compressed Video

How to extract effective expression representations that invariant to the identity-specific attributes is a long-lasting problem for facial expression recognition (FER). Most of the previous methods process the RGB images of a sequence, while we argue that the off-the-shelf and valuable expression-related muscle movement is already embedded in the compression format. In this paper, we target to explore the inter-subject variations eliminated facial expression representation in the compressed video domain. In the up to two orders of magnitude compressed domain, we can explicitly infer the expression from the residual frames and possibly extract identity factors from the I frame with a pre-trained face recognition network. By enforcing the marginal independence of them, the expression feature is expected to be purer for the expression and be robust to identity shifts. Specifically, we propose a novel collaborative min-min game for mutual information (MI) minimization in latent space. We do not need the identity label or multiple expression samples from the same person for identity elimination. Moreover, when the apex frame is annotated in the dataset, the complementary constraint can be further added to regularize the feature-level game. In testing, only the compressed residual frames are required to achieve expression prediction. Our solution can achieve comparable or better performance than the recent decoded image-based methods on the typical FER benchmarks with about 3 times faster inference.

cs.CV↗

arXiv2021

A Unified Conditional Disentanglement Framework for Multimodal Brain MR Image Translation

Multimodal MRI provides complementary and clinically relevant information to probe tissue condition and to characterize various diseases. However, it is often difficult to acquire sufficiently many modalities from the same subject due to limitations in study plans, while quantitative analysis is still demanded. In this work, we propose a unified conditional disentanglement framework to synthesize any arbitrary modality from an input modality. Our framework hinges on a cycle-constrained conditional adversarial training approach, where it can extract a modality-invariant anatomical feature with a modality-agnostic encoder and generate a target modality with a conditioned decoder. We validate our framework on four MRI modalities, including T1-weighted, T1 contrast enhanced, T2-weighted, and FLAIR MRI, from the BraTS'18 database, showing superior performance on synthesis quality over the comparison methods. In addition, we report results from experiments on a tumor segmentation task carried out with synthesized data.

eess.IV↗

arXiv2021

Two-Dimensional Bipolar Magnetic Semiconductor with High Curie Temperature and Electrically Controllable Spin Polarization Realized in Exfoliated Cr(pyrazine)$_2$ Monolayer

Exploring two-dimensional (2D) magnetic semiconductors with room temperature magnetic ordering and electrically controllable spin polarization is a highly desirable but challenging task for nanospintronics. Here, through first principles calculations, we propose to realize such a material by exfoliating the recently synthesized organometallic layered crystal Li$_{0.7}$[Cr(pyz)$_2$]Cl$_{0.7}$0.25$\cdot$(THF) (pyz = pyrazine, THF = tetrahydrofuran) [Science 370, 587 (2020)]. The feasibility of exfoliation is confirmed by the rather low exfoliation energy of 0.27 J/m$^2$, even smaller than that of graphite. In exfoliated Cr(pyz)$_2$ monolayer, each pyrazine ring grabs one electron from the Cr atom to become a radical anion, then a strong $d$-$p$ direct exchange magnetic interaction emerges between Cr cations and pyrazine radicals, resulting in room temperature ferrimagnetism with a Curie temperature of 342 K. Moreover, Cr(pyz)$_2$ monolayer is revealed to be an intrinsic bipolar magnetic semiconductor where electrical doping can induce half-metallic conduction with controllable spin-polarization direction.

cond-mat.mtrl-sci↗