arXiv subjects

Xiaoman Zhang

Publications and source records attributed to Xiaoman Zhang.

At least 19 recordsLinked to original sources

arXiv2026

Asclepius: An Adaptive Harness for Long-Horizon Clinical Agents

LLM agents are predominantly benchmarked on short, single-task trajectories, yet real deployments run for hours under contention, surfacing a different class of failures. We use the Clinical Environment Simulator (CES), in which an agent manages an entire emergency-department shift under continuous time and resource pressure, as a testbed: long-horizon execution failures manifest measurably in a single rollout under structured, multi-dimensional grading. On CES, current agents reach the correct diagnosis in most cases yet fail to deliver complete and timely critical actions, revealing an execution gap. We attribute this gap to three long-horizon failure modes, each operationalized as a per-trace counter: instruction-adherence drift, treatment incompleteness, and a severity-equity gap in timeliness. We then introduce Asclepius, an adaptive agent scaffolding with a self-evolving harness that rewrites the operating manual between shifts from trace-level feedback, an externalized clinical skills library for high-stakes regimen knowledge, and three isolated subagents that partition per-turn decisions across the patient queue. On held-out batches never observed during harness evolution, Asclepius improves critical-action correctness by 22% (p = 0.024) over a strong baseline agent framework while preserving diagnostic accuracy, with consistent gains across five LLM judges from three model families; on the full ten-batch set, improvements reach 25% on critical actions and 13% on timeliness. The three failure modes form a coupled bottleneck: decisive reductions appear only when all three components act together.

cs.AI↗

arXiv2026

ReXrank: A Public Leaderboard for AI-Powered Radiology Report Generation

AI-driven models have demonstrated significant potential in automating radiology report generation for chest X-rays. However, there is no standardized benchmark for objectively evaluating their performance. To address this, we present ReXrank, https://rexrank.ai, a public leaderboard and challenge for assessing AI-powered radiology report generation. Our framework incorporates ReXGradient, the largest test dataset consisting of 10,000 studies, and three public datasets (MIMIC-CXR, IU-Xray, CheXpert Plus) for report generation assessment. ReXrank employs 8 evaluation metrics and separately assesses models capable of generating only findings sections and those providing both findings and impressions sections. By providing this standardized evaluation framework, ReXrank enables meaningful comparisons of model performance and offers crucial insights into their robustness across diverse clinical settings. Beyond its current focus on chest X-rays, ReXrank's framework sets the stage for comprehensive evaluation of automated reporting across the full spectrum of medical imaging.

cs.CV↗

arXiv2026

Imitation Learning for Robot Assistance in Open Surgery: A Multi-Policy Evaluation on Suture Following

This study presents the first evaluation of general-purpose imitation learning for surgeon-robot collaborative assistance in open surgery, targeting suture following: the grab-pull-release motion an assistant performs at every stitch. We collect 160 teleoperated demonstrations (32,374 frames) on an open-source robot arm, benchmark four architecturally diverse imitation learning policies (ACT, Diffusion Policy, SmolVLA, $π_0$) across 28 trained models evaluated in 32 configurations along three clinically motivated dimensions: dataset size, camera viewpoint, and background variation. Our results demonstrate that under ideal conditions, the four policies achieve $50$-$75\%$ task success, with depth error as the dominant failure mode across all architectures. Among all policies, $π_0$ achieves the strongest results with a pretrained vision-language backbone, demonstrating superior data efficiency, greater robustness to background variation, and smoother trajectories compatible with surgical workflow. When deployed in a surgeon-robot suturing trial, $π_0$ yields a $92\%$ stitch completion rate. These findings establish collaborative robotic assistance in open surgery as a feasible target for imitation learning and highlight depth perception and end-effector design as key priorities for clinical translation.

cs.RO↗

arXiv2026

A Vision-language Framework for Comparative Reasoning in Radiology

Medical imaging artificial intelligence has achieved strong performance in isolated image interpretation, but remains poorly aligned with radiological practice, where diagnosis and follow-up rely on comparison across prior studies and analogous reference cases. Here we formulate radiological comparison as an entity-aware cross-image reasoning problem and introduce a framework that supports both reference-case retrieval and temporal comparative interpretation. We construct MedReCo-DB, a large-scale comparative imaging resource derived from routine image-report pairs, comprising more than 690,000 images from over 160,000 patients across eight institutions, four countries and seven imaging modalities. Reports are decomposed into anatomical structures, abnormal findings and pathological conditions to provide supervision for entity-conditioned retrieval and comparative visual question answering. Using this resource, we develop MedReCo, an entity-aware visual encoder for controllable retrieval of clinically analogous cases, and MedReCo-VLM, a vision--language extension for generative interpretation of interval change. Across internal, external and cross-center evaluations, MedReCo achieved the highest Recall@1 in all 12 internal retrieval settings and improved external retrieval by a mean of 6.0 percentage points. In clinically confusable differential groups, it consistently outperformed the strongest baselines. MedReCo-VLM achieved the best performance across all comparative generation evaluations and improved longitudinal follow-up accuracy by 14.5-46.5 percentage points on chest radiographs and 13.0-27.9 percentage points on CT. These findings suggest that entity-aware comparative reasoning can be learned from routine clinical data at scale and may provide a more clinically aligned foundation for medical imaging AI.

cs.CV↗

arXiv2026

A systematic evaluation of vision-language models for observational astronomical reasoning tasks

Vision-language models (VLMs) are increasingly proposed as general-purpose tools for scientific data interpretation, yet their reliability on real astronomical observations across diverse modalities remains untested. We present AstroVLBench, a comprehensive benchmark comprising over 4,100 expert-verified instances across five tasks spanning optical imaging, radio interferometry, multi-wavelength photometry, time-domain light curves, and optical spectroscopy. Evaluating six frontier models, we find that performance is strongly modality-dependent: while one model (Gemini 3 Pro) emerges as the most consistently capable across tasks, task-specific strengths vary, and all models substantially underperform domain-specialized methods. Mechanistic ablations reveal that performance depends not only on directing attention to salient visual features but also on grounding those features in physical knowledge. Phenomenological prompts describing what to look for improve accuracy by sharpening model focus, but physical prompts explaining why those features matter perform better overall and yield more balanced classifications with reduced class-specific bias. Consistent with this picture, presenting the underlying one-dimensional measurements directly as numerical tables instead of rendered plots yields up to 13 percentage points improvement. Reasoning quality analysis further demonstrates that, without explicit physical grounding, models may reach correct predictions from phenomenologically plausible cues while providing physically imprecise justifications, establishing that accuracy alone is insufficient for trustworthy scientific deployment. These findings provide the first systematic, multi-modal baselines for VLMs in observational astronomy and identify the specific representation, grounding, and reasoning bottlenecks where current models fail.

cs.AI↗

arXiv2026

ReXSonoVQA: A Video QA Benchmark for Procedure-Centric Ultrasound Understanding

Ultrasound acquisition requires skilled probe manipulation and real-time adjustments. Vision-language models (VLMs) could enable autonomous ultrasound systems, but existing benchmarks evaluate only static images, not dynamic procedural understanding. We introduce ReXSonoVQA, a video QA benchmark with 514 video clips and 514 questions (249 MCQ, 265 free-response) targeting three competencies: Action-Goal Reasoning, Artifact Resolution & Optimization, and Procedure Context & Planning. Zero-shot evaluation of Gemini 3 Pro, Qwen3.5-397B, LLaVA-Video-72B, and Seed 2.0 Pro shows VLMs can extract some procedural information, but troubleshooting questions remain challenging with minimal gains over text-only baselines, exposing limitations in causal reasoning. ReXSonoVQA enables developing perception systems for ultrasound training, guidance, and robotic automation.

cs.CV↗

arXiv2026

DustNET: enabling machine learning and AI models of dusty plasmas

Dusty plasmas are ubiquitous throughout the universe, spanning laboratory and industrial plasmas, fusion devices, planetary environments, cometary comae, and interstellar media. Despite decades of research, many aspects of their behavior remain poorly understood within a unified framework. While numerous theoretical and numerical models describe specific phenomena, such as dust charging, transport, waves, and self-organization, fully predictive models across the wide range of spatial and temporal scales in both laboratory and natural systems remain elusive. Conventional plasma descriptions rely on coupled differential equations for particle densities, momenta, and energies, but their solutions are often limited by computational cost, numerical uncertainties, and incomplete knowledge of boundary conditions and transport processes. Recent advances in machine learning (ML), particularly deep neural networks, offer new opportunities to complement traditional physics-based modeling. Here we review ML and artificial intelligence (AI) approaches, termed bottom-up data-driven methods, for dusty plasma research. Central to this effort is Dust Neural nEtworks Technology (DustNET), a community-driven dataset initiative inspired by ImageNet, integrating experimental, simulation, and synthetic data to enable predictive modeling, uncertainty quantification, and multi-scale analysis. DustNET-trained models may also be deployed in real-time experimental settings under edge computing constraints. Combined with emerging multi-modal AI foundation models and autonomous agents, this framework provides a pathway toward a unified, physics-informed understanding of dusty plasmas across laboratory, industrial, space, and astrophysical environments.

physics.plasm-ph↗

arXiv2026

ReXInTheWild: A Unified Benchmark for Medical Photograph Understanding

Everyday photographs taken with ordinary cameras are already widely used in telemedicine and other online health conversations, yet no comprehensive benchmark evaluates whether vision-language models can interpret their medical content. Analyzing these images requires both fine-grained natural image understanding and domain-specific medical reasoning, a combination that challenges both general-purpose and specialized models. We introduce ReXInTheWild, a benchmark of 955 clinician-verified multiple-choice questions spanning seven clinical topics across 484 photographs sourced from the biomedical literature. When evaluated on ReXInTheWild, leading multimodal large language models show substantial performance variation: Gemini-3 achieves 78% accuracy, followed by Claude Opus 4.5 (72%) and GPT-5 (68%), while the medical specialist model MedGemma reaches only 37%. A systematic error analysis also reveals four categories of common errors, ranging from low-level geometric errors to high-level reasoning failures and requiring different mitigation strategies. ReXInTheWild provides a challenging, clinically grounded benchmark at the intersection of natural image understanding and medical reasoning. The dataset is available on HuggingFace.

cs.CV↗

arXiv2026

Do Mixed-Vendor Multi-Agent LLMs Improve Clinical Diagnosis?

Multi-agent large language model (LLM) systems have emerged as a promising approach for clinical diagnosis, leveraging collaboration among agents to refine medical reasoning. However, most existing frameworks rely on single-vendor teams (e.g., multiple agents from the same model family), which risk correlated failure modes that reinforce shared biases rather than correcting them. We investigate the impact of vendor diversity by comparing Single-LLM, Single-Vendor, and Mixed-Vendor Multi-Agent Conversation (MAC) frameworks. Using three doctor agents instantiated with o4-mini, Gemini-2.5-Pro, and Claude-4.5-Sonnet, we evaluate performance on RareBench and DiagnosisArena. Mixed-vendor configurations consistently outperform single-vendor counterparts, achieving state-of-the-art recall and accuracy. Overlap analysis reveals the underlying mechanism: mixed-vendor teams pool complementary inductive biases, surfacing correct diagnoses that individual models or homogeneous teams collectively miss. These results highlight vendor diversity as a key design principle for robust clinical diagnostic systems.

cs.CL↗

arXiv2026

An Agentic System for Rare Disease Diagnosis with Traceable Reasoning

Rare diseases affect over 300 million individuals worldwide, yet timely and accurate diagnosis remains an urgent challenge. Patients often endure a prolonged diagnostic odyssey exceeding five years, marked by repeated referrals, misdiagnoses, and unnecessary interventions, leading to delayed treatment and substantial emotional and economic burdens. Here we present DeepRare, a multi-agent system for rare disease differential diagnosis decision support powered by large language models, integrating over 40 specialized tools and up-to-date knowledge sources. DeepRare processes heterogeneous clinical inputs, including free-text descriptions, structured Human Phenotype Ontology terms, and genetic testing results, to generate ranked diagnostic hypotheses with transparent reasoning linked to verifiable medical evidence. Evaluated across nine datasets from literature, case reports and clinical centres across Asia, North America and Europe spanning 14 medical specialties, DeepRare demonstrates exceptional performance on 3,134 diseases. In human-phenotype-ontology-based tasks, it achieves an average Recall@1 of 57.18%, outperforming the next-best method by 23.79%; in multi-modal tests, it reaches 69.1% compared with Exomiser's 55.9% on 168 cases. Expert review achieved 95.4% agreement on its reasoning chains, confirming their validity and traceability. Our work not only advances rare disease diagnosis but also demonstrates how the latest powerful large-language-model-driven agentic systems can reshape current clinical workflows.

cs.CL↗

arXiv2025

ReX-MLE: The Autonomous Agent Benchmark for Medical Imaging Challenges

Autonomous coding agents built on large language models (LLMs) can now solve many general software and machine learning tasks, but they remain ineffective on complex, domain-specific scientific problems. Medical imaging is a particularly demanding domain, requiring long training cycles, high-dimensional data handling, and specialized preprocessing and validation pipelines, capabilities not fully measured in existing agent benchmarks. To address this gap, we introduce ReX-MLE, a benchmark of 20 challenges derived from high-impact medical imaging competitions spanning diverse modalities and task types. Unlike prior ML-agent benchmarks, ReX-MLE evaluates full end-to-end workflows, requiring agents to independently manage data preprocessing, model training, and submission under realistic compute and time constraints. Evaluating state-of-the-art agents (AIDE, ML-Master, R&D-Agent) with different LLM backends (GPT-5, Gemini, Claude), we observe a severe performance gap: most submissions rank in the 0th percentile compared to human experts. Failures stem from domain-knowledge and engineering limitations. ReX-MLE exposes these bottlenecks and provides a foundation for developing domain-aware autonomous AI systems.

cs.CV↗

arXiv2025

Reflections from Research Roundtables at the Conference on Health, Inference, and Learning (CHIL) 2025

The 6th Annual Conference on Health, Inference, and Learning (CHIL 2025), hosted by the Association for Health Learning and Inference (AHLI), was held in person on June 25-27, 2025, at the University of California, Berkeley, in Berkeley, California, USA. As part of this year's program, we hosted Research Roundtables to catalyze collaborative, small-group dialogue around critical, timely topics at the intersection of machine learning and healthcare. Each roundtable was moderated by a team of senior and junior chairs who fostered open exchange, intellectual curiosity, and inclusive engagement. The sessions emphasized rigorous discussion of key challenges, exploration of emerging opportunities, and collective ideation toward actionable directions in the field. In total, eight roundtables were held by 19 roundtable chairs on topics of "Explainability, Interpretability, and Transparency," "Uncertainty, Bias, and Fairness," "Causality," "Domain Adaptation," "Foundation Models," "Learning from Small Medical Data," "Multimodal Methods," and "Scalable, Translational Healthcare Solutions."

cs.LG↗

arXiv2025

ReXGroundingCT: A 3D Chest CT Dataset for Segmentation of Findings from Free-Text Reports

We introduce ReXGroundingCT, the first publicly available dataset linking free-text findings to pixel-level 3D segmentations in chest CT scans. The dataset includes 3,142 non-contrast chest CT scans paired with standardized radiology reports from CT-RATE. Construction followed a structured three-stage pipeline. First, GPT-4 was used to extract and standardize findings, descriptors, and metadata from reports originally written in Turkish and machine-translated into English. Second, GPT-4o-mini categorized each finding into a hierarchical ontology of lung and pleural abnormalities. Third, 3D annotations were produced for all CT volumes: the training set was quality-assured by board-certified radiologists, and the validation and test sets were fully annotated by board-certified radiologists. Additionally, a complementary chain-of-thought dataset was created to provide step-by-step hierarchical anatomical reasoning for localizing findings within the CT volume, using GPT-4o and localization coordinates derived from organ segmentation models. ReXGroundingCT contains 16,301 annotated entities across 8,028 text-to-3D-segmentation pairs, covering diverse radiological patterns from 3,142 non-contrast CT scans. About 79% of findings are focal abnormalities and 21% are non-focal. The dataset includes a public validation set of 50 cases and a private test set of 100 cases, both annotated by board-certified radiologists. The dataset establishes a foundation for enabling free-text finding segmentation and grounded radiology report generation in CT imaging. Model performance on the private test set is hosted on a public leaderboard at https://rexrank.ai/ReXGroundingCT. The dataset is available at https://huggingface.co/datasets/rajpurkarlab/ReXGroundingCT.

eess.IV↗

arXiv2025

3DReasonKnee: Advancing Grounded Reasoning in Medical Vision Language Models

Current Vision-Language Models (VLMs) struggle to ground anatomical regions in 3D medical images and reason about them in a step-by-step manner, a key requirement of real-world diagnostic assessment. This ability is essential for aligning model outputs with the diagnostic workflows clinicians use in practice, enabling trustworthy clinician-AI collaboration. Existing 3D datasets provide localization labels, but none support this "grounded reasoning" ability. To address this gap, we introduce 3DReasonKnee, the first 3D grounded reasoning dataset for medical images, which provides 494k high-quality quintuples derived from 7,970 3D knee MRI volumes. Each quintuple includes: (1) the 3D MRI volume, (2) a diagnostic question targeting a specific anatomical region (3) a 3D bounding box localizing the relevant anatomical structures, (4) clinician-generated diagnostic reasoning steps that explicitly detail the 3D reasoning process, and (5) structured severity assessments for the relevant anatomical region. The creation and validation of 3DReasonKnee, involving over 450 hours of expert clinician time for manually segmenting MRIs and generating reasoning chains, ensures its superior quality and clinical relevance. We establish ReasonKnee-Bench to evaluate localization and diagnostic accuracy, providing insight into VLM ability to perform grounding and severity assessment across anatomical regions and diagnostic inquiries. We benchmark five state-of-the-art VLMs, providing baseline performance for ReasonKnee-Bench. By providing this unique resource of expert-annotated 3D reasoning pathways, 3DReasonKnee serves as a repository of orthopedic surgeons' diagnostic expertise and offers a vital testbed for advancing multimodal medical AI systems towards 3D, clinically aligned, localized decision-making capabilities. The dataset can be found in: https://huggingface.co/datasets/rajpurkarlab/3DReasonKnee

cs.CV↗

arXiv2025

Boosting Pathology Foundation Models via Few-shot Prompt-tuning for Rare Cancer Subtyping

Rare cancers comprise 20-25% of all malignancies but face major diagnostic challenges due to limited expert availability-especially in pediatric oncology, where they represent over 70% of cases. While pathology vision-language (VL) foundation models show promising zero-shot capabilities for common cancer subtyping, their clinical performance for rare cancers remains limited. Existing multi-instance learning (MIL) methods rely only on visual features, overlooking cross-modal knowledge and compromising interpretability critical for rare cancer diagnosis. To address this limitation, we propose PathPT, a novel framework that fully exploits the potential of vision-language pathology foundation models through spatially-aware visual aggregation and task-specific prompt tuning. Unlike conventional MIL, PathPT converts WSI-level supervision into fine-grained tile-level guidance by leveraging the zero-shot capabilities of VL models, thereby preserving localization on cancerous regions and enabling cross-modal reasoning through prompts aligned with histopathological semantics. We benchmark PathPT on eight rare cancer datasets(four adult and four pediatric) spanning 56 subtypes and 2,910 WSIs, as well as three common cancer datasets, evaluating four state-of-the-art VL models and four MIL frameworks under three few-shot settings. Results show that PathPT consistently delivers superior performance, achieving substantial gains in subtyping accuracy and cancerous region grounding ability. This work advances AI-assisted diagnosis for rare cancers, offering a scalable solution for improving subtyping accuracy in settings with limited access to specialized expertise.

cs.CV↗

arXiv2025

Large-Vocabulary Segmentation for Medical Images with Text Prompts

This paper aims to build a model that can Segment Anything in 3D medical images, driven by medical terminologies as Text prompts, termed as SAT. Our main contributions are three-fold: (i) We construct the first multimodal knowledge tree on human anatomy, including 6502 anatomical terminologies; Then, we build the largest and most comprehensive segmentation dataset for training, collecting over 22K 3D scans from 72 datasets, across 497 classes, with careful standardization on both image and label space; (ii) We propose to inject medical knowledge into a text encoder via contrastive learning and formulate a large-vocabulary segmentation model that can be prompted by medical terminologies in text form; (iii) We train SAT-Nano (110M parameters) and SAT-Pro (447M parameters). SAT-Pro achieves comparable performance to 72 nnU-Nets -- the strongest specialist models trained on each dataset (over 2.2B parameters combined) -- over 497 categories. Compared with the interactive approach MedSAM, SAT-Pro consistently outperforms across all 7 human body regions with +7.1% average Dice Similarity Coefficient (DSC) improvement, while showing enhanced scalability and robustness. On 2 external (cross-center) datasets, SAT-Pro achieves higher performance than all baselines (+3.7% average DSC), demonstrating superior generalization ability.

eess.IV↗

arXiv2025

Voice-guided Orchestrated Intelligence for Clinical Evaluation (VOICE): A Voice AI Agent System for Prehospital Stroke Assessment

We developed a voice-driven artificial intelligence (AI) system that guides anyone - from paramedics to family members - through expert-level stroke evaluations using natural conversation, while also enabling smartphone video capture of key examination components for documentation and potential expert review. This addresses a critical gap in emergency care: current stroke recognition by first responders is inconsistent and often inaccurate, with sensitivity for stroke detection as low as 58%, causing life-threatening delays in treatment. Three non-medical volunteers used our AI system to assess ten simulated stroke patients, including cases with likely large vessel occlusion (LVO) strokes and stroke-like conditions, while we measured diagnostic accuracy, completion times, user confidence, and expert physician review of the AI-generated reports. The AI system correctly identified 84% of individual stroke signs and detected 75% of likely LVOs, completing evaluations in just over 6 minutes. Users reported high confidence (median 4.5/5) and ease of use (mean 4.67/5). The system successfully identified 86% of actual strokes but also incorrectly flagged 2 of 3 non-stroke cases as strokes. When an expert physician reviewed the AI reports with videos, they identified the correct diagnosis in 100% of cases, but felt confident enough to make preliminary treatment decisions in only 40% of cases due to observed AI errors including incorrect scoring and false information. While the current system's limitations necessitate human oversight, ongoing rapid advancements in speech-to-speech AI models suggest that future versions are poised to enable highly accurate assessments. Achieving human-level voice interaction could transform emergency medical care, putting expert-informed assessment capabilities in everyone's hands.

cs.HC↗

arXiv2025

ReXVQA: A Large-scale Visual Question Answering Benchmark for Generalist Chest X-ray Understanding

We present ReXVQA, the largest and most comprehensive benchmark for visual question answering (VQA) in chest radiology, comprising approximately 696,000 questions paired with 160,000 chest X-rays studies across training, validation, and test sets. Unlike prior efforts that rely heavily on template based queries, ReXVQA introduces a diverse and clinically authentic task suite reflecting five core radiological reasoning skills: presence assessment, location analysis, negation detection, differential diagnosis, and geometric reasoning. We evaluate eight state-of-the-art multimodal large language models, including MedGemma-4B-it, Qwen2.5-VL, Janus-Pro-7B, and Eagle2-9B. The best-performing model (MedGemma) achieves 83.24% overall accuracy. To bridge the gap between AI performance and clinical expertise, we conducted a comprehensive human reader study involving 3 radiology residents on 200 randomly sampled cases. Our evaluation demonstrates that MedGemma achieved superior performance (83.84% accuracy) compared to human readers (best radiology resident: 77.27%), representing a significant milestone where AI performance exceeds expert human evaluation on chest X-ray interpretation. The reader study reveals distinct performance patterns between AI models and human experts, with strong inter-reader agreement among radiologists while showing more variable agreement patterns between human readers and AI models. ReXVQA establishes a new standard for evaluating generalist radiological AI systems, offering public leaderboards, fine-grained evaluation splits, structured explanations, and category-level breakdowns. This benchmark lays the foundation for next-generation AI systems capable of mimicking expert-level clinical reasoning beyond narrow pathology classification. Our dataset will be open-sourced at https://huggingface.co/datasets/rajpurkarlab/ReXVQA

cs.CV↗