arXiv subjects

Xiaowei Xu

Publications and source records attributed to Xiaowei Xu.

At least 37 records · Page 2Linked to original sources

arXiv2024

MPBD-LSTM: A Predictive Model for Colorectal Liver Metastases Using Time Series Multi-phase Contrast-Enhanced CT Scans

Colorectal cancer is a prevalent form of cancer, and many patients develop colorectal cancer liver metastasis (CRLM) as a result. Early detection of CRLM is critical for improving survival rates. Radiologists usually rely on a series of multi-phase contrast-enhanced computed tomography (CECT) scans done during follow-up visits to perform early detection of the potential CRLM. These scans form unique five-dimensional data (time, phase, and axial, sagittal, and coronal planes in 3D CT). Most of the existing deep learning models can readily handle four-dimensional data (e.g., time-series 3D CT images) and it is not clear how well they can be extended to handle the additional dimension of phase. In this paper, we build a dataset of time-series CECT scans to aid in the early diagnosis of CRLM, and build upon state-of-the-art deep learning techniques to evaluate how to best predict CRLM. Our experimental results show that a multi-plane architecture based on 3D bi-directional LSTM, which we call MPBD-LSTM, works best, achieving an area under curve (AUC) of 0.79. On the other hand, analysis of the results shows that there is still great room for further improvement.

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arXiv2024

Leveraging large language models for efficient representation learning for entity resolution

In this paper, the authors propose TriBERTa, a supervised entity resolution system that utilizes a pre-trained large language model and a triplet loss function to learn representations for entity matching. The system consists of two steps: first, name entity records are fed into a Sentence Bidirectional Encoder Representations from Transformers (SBERT) model to generate vector representations, which are then fine-tuned using contrastive learning based on a triplet loss function. Fine-tuned representations are used as input for entity matching tasks, and the results show that the proposed approach outperforms state-of-the-art representations, including SBERT without fine-tuning and conventional Term Frequency-Inverse Document Frequency (TF-IDF), by a margin of 3 - 19%. Additionally, the representations generated by TriBERTa demonstrated increased robustness, maintaining consistently higher performance across a range of datasets. The authors also discussed the importance of entity resolution in today's data-driven landscape and the challenges that arise when identifying and reconciling duplicate data across different sources. They also described the ER process, which involves several crucial steps, including blocking, entity matching, and clustering.

cs.CL↗

arXiv2024

CardiacNet: Learning to Reconstruct Abnormalities for Cardiac Disease Assessment from Echocardiogram Videos

Echocardiogram video plays a crucial role in analysing cardiac function and diagnosing cardiac diseases. Current deep neural network methods primarily aim to enhance diagnosis accuracy by incorporating prior knowledge, such as segmenting cardiac structures or lesions annotated by human experts. However, diagnosing the inconsistent behaviours of the heart, which exist across both spatial and temporal dimensions, remains extremely challenging. For instance, the analysis of cardiac motion acquires both spatial and temporal information from the heartbeat cycle. To address this issue, we propose a novel reconstruction-based approach named CardiacNet to learn a better representation of local cardiac structures and motion abnormalities through echocardiogram videos. CardiacNet is accompanied by the Consistency Deformation Codebook (CDC) and the Consistency Deformed-Discriminator (CDD) to learn the commonalities across abnormal and normal samples by incorporating cardiac prior knowledge. In addition, we propose benchmark datasets named CardiacNet-PAH and CardiacNet-ASD to evaluate the effectiveness of cardiac disease assessment. In experiments, our CardiacNet can achieve state-of-the-art results in three different cardiac disease assessment tasks on public datasets CAMUS, EchoNet, and our datasets. The code and dataset are available at: https://github.com/xmed-lab/CardiacNet.

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arXiv2024

STTM: A New Approach Based Spatial-Temporal Transformer And Memory Network For Real-time Pressure Signal In On-demand Food Delivery

On-demand Food Delivery (OFD) services have become very common around the world. For example, on the Ele.me platform, users place more than 15 million food orders every day. Predicting the Real-time Pressure Signal (RPS) is crucial for OFD services, as it is primarily used to measure the current status of pressure on the logistics system. When RPS rises, the pressure increases, and the platform needs to quickly take measures to prevent the logistics system from being overloaded. Usually, the average delivery time for all orders within a business district is used to represent RPS. Existing research on OFD services primarily focuses on predicting the delivery time of orders, while relatively less attention has been given to the study of the RPS. Previous research directly applies general models such as DeepFM, RNN, and GNN for prediction, but fails to adequately utilize the unique temporal and spatial characteristics of OFD services, and faces issues with insufficient sensitivity during sudden severe weather conditions or peak periods. To address these problems, this paper proposes a new method based on Spatio-Temporal Transformer and Memory Network (STTM). Specifically, we use a novel Spatio-Temporal Transformer structure to learn logistics features across temporal and spatial dimensions and encode the historical information of a business district and its neighbors, thereby learning both temporal and spatial information. Additionally, a Memory Network is employed to increase sensitivity to abnormal events. Experimental results on the real-world dataset show that STTM significantly outperforms previous methods in both offline experiments and the online A/B test, demonstrating the effectiveness of this method.

cs.LG↗

arXiv2024

Data-Algorithm-Architecture Co-Optimization for Fair Neural Networks on Skin Lesion Dataset

As Artificial Intelligence (AI) increasingly integrates into our daily lives, fairness has emerged as a critical concern, particularly in medical AI, where datasets often reflect inherent biases due to social factors like the underrepresentation of marginalized communities and socioeconomic barriers to data collection. Traditional approaches to mitigating these biases have focused on data augmentation and the development of fairness-aware training algorithms. However, this paper argues that the architecture of neural networks, a core component of Machine Learning (ML), plays a crucial role in ensuring fairness. We demonstrate that addressing fairness effectively requires a holistic approach that simultaneously considers data, algorithms, and architecture. Utilizing Automated ML (AutoML) technology, specifically Neural Architecture Search (NAS), we introduce a novel framework, BiaslessNAS, designed to achieve fair outcomes in analyzing skin lesion datasets. BiaslessNAS incorporates fairness considerations at every stage of the NAS process, leading to the identification of neural networks that are not only more accurate but also significantly fairer. Our experiments show that BiaslessNAS achieves a 2.55% increase in accuracy and a 65.50% improvement in fairness compared to traditional NAS methods, underscoring the importance of integrating fairness into neural network architecture for better outcomes in medical AI applications.

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arXiv2024

On Euler-Dierkes-Huisken variational problem

In this paper, we study the stability and minimizing properties of higher codimensional surfaces in Euclidean space associated with the $f$-weighted area-functional $$\mathcal{E}_f(M)=\int_M f(x)\; d \mathcal{H}_k$$ with the density function $f(x)=g(|x|)$ and $g(t)$ is non-negative, which develop the recent works by U. Dierkes and G. Huisken (Math. Ann., 20 October 2023) on hypersurfaces with the density function $|x|^α$. Under suitable assumptions on $g(t)$, we prove that minimal cones with globally flat normal bundles are $f$-stable, and we also prove that the regular minimal cones satisfying Lawlor curvature criterion, the highly singular determinantal varieties and Pfaffian varieties without some exceptional cases are $f$-minimizing. As an application, we show that $k$-dimensional minimal cones over product of spheres are $|x|^α$-stable for $α\geq-k+2\sqrt{2(k-1)}$, the oriented stable minimal hypercones are $|x|^α$-stable for $α\geq 0$, and we also show that the minimal cones over product of spheres $\mathcal{C}=C \left(S^{k_1} \times \cdots \times S^{k_{m}}\right)$ are $|x|^α$-minimizing for $\dim \mathcal{C} \geq 7$, $k_i>1$ and $α\geq 0$, the Simons cones $C(S^{p} \times S^{p})(p\geq 1)$ are $|x|^α$-minimizing for any $α\geq 1$, which relaxes the assumption $1\leqα\leq 2p$ in \cite{DH23}.

math.DG↗

arXiv2024

Invisible Backdoor Attack Through Singular Value Decomposition

With the widespread application of deep learning across various domains, concerns about its security have grown significantly. Among these, backdoor attacks pose a serious security threat to deep neural networks (DNNs). In recent years, backdoor attacks on neural networks have become increasingly sophisticated, aiming to compromise the security and trustworthiness of models by implanting hidden, unauthorized functionalities or triggers, leading to misleading predictions or behaviors. To make triggers less perceptible and imperceptible, various invisible backdoor attacks have been proposed. However, most of them only consider invisibility in the spatial domain, making it easy for recent defense methods to detect the generated toxic images.To address these challenges, this paper proposes an invisible backdoor attack called DEBA. DEBA leverages the mathematical properties of Singular Value Decomposition (SVD) to embed imperceptible backdoors into models during the training phase, thereby causing them to exhibit predefined malicious behavior under specific trigger conditions. Specifically, we first perform SVD on images, and then replace the minor features of trigger images with those of clean images, using them as triggers to ensure the effectiveness of the attack. As minor features are scattered throughout the entire image, the major features of clean images are preserved, making poisoned images visually indistinguishable from clean ones. Extensive experimental evaluations demonstrate that DEBA is highly effective, maintaining high perceptual quality and a high attack success rate for poisoned images. Furthermore, we assess the performance of DEBA under existing defense measures, showing that it is robust and capable of significantly evading and resisting the effects of these defense measures.

cs.CR↗

arXiv2024

MDU-Net: Multi-scale Densely Connected U-Net for biomedical image segmentation

Biomedical image segmentation plays a central role in quantitative analysis, clinical diagnosis, and medical intervention. In the light of the fully convolutional networks (FCN) and U-Net, deep convolutional networks (DNNs) have made significant contributions to biomedical image segmentation applications. In this paper, we propose three different multi-scale dense connections (MDC) for the encoder, the decoder of U-shaped architectures, and across them. Based on three dense connections, we propose a multi-scale densely connected U-Net (MDU-Net) for biomedical image segmentation. MDU-Net directly fuses the neighboring feature maps with different scales from both higher layers and lower layers to strengthen feature propagation in the current layer. Multi-scale dense connections, which contain shorter connections between layers close to the input and output, also make a much deeper U-Net possible. Besides, we introduce quantization to alleviate the potential overfitting in dense connections, and further improve the segmentation performance. We evaluate our proposed model on the MICCAI 2015 Gland Segmentation (GlaS) dataset. The three MDC improve U-Net performance by up to 1.8% on test A and 3.5% on test B in the MICCAI Gland dataset. Meanwhile, the MDU-Net with quantization obviously improves the segmentation performance of original U-Net.

cs.CV↗

arXiv2024

SATBA: An Invisible Backdoor Attack Based On Spatial Attention

Backdoor attack has emerged as a novel and concerning threat to AI security. These attacks involve the training of Deep Neural Network (DNN) on datasets that contain hidden trigger patterns. Although the poisoned model behaves normally on benign samples, it exhibits abnormal behavior on samples containing the trigger pattern. However, most existing backdoor attacks suffer from two significant drawbacks: their trigger patterns are visible and easy to detect by backdoor defense or even human inspection, and their injection process results in the loss of natural sample features and trigger patterns, thereby reducing the attack success rate and model accuracy. In this paper, we propose a novel backdoor attack named SATBA that overcomes these limitations using spatial attention and an U-net based model. The attack process begins by using spatial attention to extract meaningful data features and generate trigger patterns associated with clean images. Then, an U-shaped model is used to embed these trigger patterns into the original data without causing noticeable feature loss. We evaluate our attack on three prominent image classification DNN across three standard datasets. The results demonstrate that SATBA achieves high attack success rate while maintaining robustness against backdoor defenses. Furthermore, we conduct extensive image similarity experiments to emphasize the stealthiness of our attack strategy. Overall, SATBA presents a promising approach to backdoor attack, addressing the shortcomings of previous methods and showcasing its effectiveness in evading detection and maintaining high attack success rate.

cs.CR↗

arXiv2024

Towards Trustable Language Models: Investigating Information Quality of Large Language Models

Large language models (LLM) are generating information at a rapid pace, requiring users to increasingly rely and trust the data. Despite remarkable advances of LLM, Information generated by LLM is not completely trustworthy, due to challenges in information quality. Specifically, integrity of Information quality decreases due to unreliable, biased, tokenization during pre-training of LLM. Moreover, due to decreased information quality issues, has led towards hallucination, fabricated information. Unreliable information can lead towards flawed decisions in businesses, which impacts economic activity. In this work, we introduce novel mathematical information quality evaluation of LLM, we furthermore analyze and highlight information quality challenges, scaling laws to systematically scale language models.

cs.CL↗

arXiv2023

Dynamic Sub-Cluster-Aware Network for Few-Shot Skin Disease Classification

This paper addresses the problem of few-shot skin disease classification by introducing a novel approach called the Sub-Cluster-Aware Network (SCAN) that enhances accuracy in diagnosing rare skin diseases. The key insight motivating the design of SCAN is the observation that skin disease images within a class often exhibit multiple sub-clusters, characterized by distinct variations in appearance. To improve the performance of few-shot learning, we focus on learning a high-quality feature encoder that captures the unique sub-clustered representations within each disease class, enabling better characterization of feature distributions. Specifically, SCAN follows a dual-branch framework, where the first branch learns class-wise features to distinguish different skin diseases, and the second branch aims to learn features which can effectively partition each class into several groups so as to preserve the sub-clustered structure within each class. To achieve the objective of the second branch, we present a cluster loss to learn image similarities via unsupervised clustering. To ensure that the samples in each sub-cluster are from the same class, we further design a purity loss to refine the unsupervised clustering results. We evaluate the proposed approach on two public datasets for few-shot skin disease classification. The experimental results validate that our framework outperforms the state-of-the-art methods by around 2% to 5% in terms of sensitivity, specificity, accuracy, and F1-score on the SD-198 and Derm7pt datasets.

cs.CV↗

arXiv2023

On the residual Monge-Ampère mass of plurisubharmonic functions with symmetry, II

The aim of this article is to study the residual Monge-Ampère mass of a plurisubharmonic function with an isolated singularity, provided with the circular symmetry. With the aid of Sasakian geometry, we obtain an estimate on the residual mass of this function with respect to its Lelong number and maximal directional Lelong number. This result partially answers the zero mass conjecture raised by Guedj and Rashkovskii.

math.CV↗

arXiv2023

ImageCAS: A Large-Scale Dataset and Benchmark for Coronary Artery Segmentation based on Computed Tomography Angiography Images

Cardiovascular disease (CVD) accounts for about half of non-communicable diseases. Vessel stenosis in the coronary artery is considered to be the major risk of CVD. Computed tomography angiography (CTA) is one of the widely used noninvasive imaging modalities in coronary artery diagnosis due to its superior image resolution. Clinically, segmentation of coronary arteries is essential for the diagnosis and quantification of coronary artery disease. Recently, a variety of works have been proposed to address this problem. However, on one hand, most works rely on in-house datasets, and only a few works published their datasets to the public which only contain tens of images. On the other hand, their source code have not been published, and most follow-up works have not made comparison with existing works, which makes it difficult to judge the effectiveness of the methods and hinders the further exploration of this challenging yet critical problem in the community. In this paper, we propose a large-scale dataset for coronary artery segmentation on CTA images. In addition, we have implemented a benchmark in which we have tried our best to implement several typical existing methods. Furthermore, we propose a strong baseline method which combines multi-scale patch fusion and two-stage processing to extract the details of vessels. Comprehensive experiments show that the proposed method achieves better performance than existing works on the proposed large-scale dataset. The benchmark and the dataset are published at https://github.com/XiaoweiXu/ImageCAS-A-Large-Scale-Dataset-and-Benchmark-for-Coronary-Artery-Segmentation-based-on-CT.

eess.IV↗

arXiv2023

GL-Fusion: Global-Local Fusion Network for Multi-view Echocardiogram Video Segmentation

Cardiac structure segmentation from echocardiogram videos plays a crucial role in diagnosing heart disease. The combination of multi-view echocardiogram data is essential to enhance the accuracy and robustness of automated methods. However, due to the visual disparity of the data, deriving cross-view context information remains a challenging task, and unsophisticated fusion strategies can even lower performance. In this study, we propose a novel Gobal-Local fusion (GL-Fusion) network to jointly utilize multi-view information globally and locally that improve the accuracy of echocardiogram analysis. Specifically, a Multi-view Global-based Fusion Module (MGFM) is proposed to extract global context information and to explore the cyclic relationship of different heartbeat cycles in an echocardiogram video. Additionally, a Multi-view Local-based Fusion Module (MLFM) is designed to extract correlations of cardiac structures from different views. Furthermore, we collect a multi-view echocardiogram video dataset (MvEVD) to evaluate our method. Our method achieves an 82.29% average dice score, which demonstrates a 7.83% improvement over the baseline method, and outperforms other existing state-of-the-art methods. To our knowledge, this is the first exploration of a multi-view method for echocardiogram video segmentation. Code available at: https://github.com/xmed-lab/GL-Fusion

cs.CV↗

arXiv2023

GraphEcho: Graph-Driven Unsupervised Domain Adaptation for Echocardiogram Video Segmentation

Echocardiogram video segmentation plays an important role in cardiac disease diagnosis. This paper studies the unsupervised domain adaption (UDA) for echocardiogram video segmentation, where the goal is to generalize the model trained on the source domain to other unlabelled target domains. Existing UDA segmentation methods are not suitable for this task because they do not model local information and the cyclical consistency of heartbeat. In this paper, we introduce a newly collected CardiacUDA dataset and a novel GraphEcho method for cardiac structure segmentation. Our GraphEcho comprises two innovative modules, the Spatial-wise Cross-domain Graph Matching (SCGM) and the Temporal Cycle Consistency (TCC) module, which utilize prior knowledge of echocardiogram videos, i.e., consistent cardiac structure across patients and centers and the heartbeat cyclical consistency, respectively. These two modules can better align global and local features from source and target domains, improving UDA segmentation results. Experimental results showed that our GraphEcho outperforms existing state-of-the-art UDA segmentation methods. Our collected dataset and code will be publicly released upon acceptance. This work will lay a new and solid cornerstone for cardiac structure segmentation from echocardiogram videos. Code and dataset are available at: https://github.com/xmed-lab/GraphEcho

cs.CV↗

arXiv2023

BNS-Net: A Dual-channel Sarcasm Detection Method Considering Behavior-level and Sentence-level Conflicts

Sarcasm detection is a binary classification task that aims to determine whether a given utterance is sarcastic. Over the past decade, sarcasm detection has evolved from classical pattern recognition to deep learning approaches, where features such as user profile, punctuation and sentiment words have been commonly employed for sarcasm detection. In real-life sarcastic expressions, behaviors without explicit sentimental cues often serve as carriers of implicit sentimental meanings. Motivated by this observation, we proposed a dual-channel sarcasm detection model named BNS-Net. The model considers behavior and sentence conflicts in two channels. Channel 1: Behavior-level Conflict Channel reconstructs the text based on core verbs while leveraging the modified attention mechanism to highlight conflict information. Channel 2: Sentence-level Conflict Channel introduces external sentiment knowledge to segment the text into explicit and implicit sentences, capturing conflicts between them. To validate the effectiveness of BNS-Net, several comparative and ablation experiments are conducted on three public sarcasm datasets. The analysis and evaluation of experimental results demonstrate that the BNS-Net effectively identifies sarcasm in text and achieves the state-of-the-art performance.

cs.CL↗

arXiv2023

Compactness of conformal Chern-minimal surfaces in Hermitian surface

The Chern-minimal surfaces in Hermitian surface play a similar role as minimal surfaces in Kähler surface (see \cite{[PX-21]}) from the viewpoint of submanifolds. This paper studies the compactness of Chern-minimal surfaces. We prove that any sequence $\{f_n\}$ of conformal Chern-minimal maps from closed Riemann surface $(Σ,\emph{\texttt{j}})$ into a compact Hermitian surface $(M, J, h)$ with bounded area has a bubble tree limit, which consisting of a Chern-minimal map $f_0$ from $Σ$ into $M$ and a finite set of Chern-minimal maps from $S^2$ into $M$. We also show that the limit preserves area and homotopy class.

math.DG↗

arXiv2023

TinyML Design Contest for Life-Threatening Ventricular Arrhythmia Detection

The first ACM/IEEE TinyML Design Contest (TDC) held at the 41st International Conference on Computer-Aided Design (ICCAD) in 2022 is a challenging, multi-month, research and development competition. TDC'22 focuses on real-world medical problems that require the innovation and implementation of artificial intelligence/machine learning (AI/ML) algorithms on implantable devices. The challenge problem of TDC'22 is to develop a novel AI/ML-based real-time detection algorithm for life-threatening ventricular arrhythmia over low-power microcontrollers utilized in Implantable Cardioverter-Defibrillators (ICDs). The dataset contains more than 38,000 5-second intracardiac electrograms (IEGMs) segments over 8 different types of rhythm from 90 subjects. The dedicated hardware platform is NUCLEO-L432KC manufactured by STMicroelectronics. TDC'22, which is open to multi-person teams world-wide, attracted more than 150 teams from over 50 organizations. This paper first presents the medical problem, dataset, and evaluation procedure in detail. It further demonstrates and discusses the designs developed by the leading teams as well as representative results. This paper concludes with the direction of improvement for the future TinyML design for health monitoring applications.

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