arXiv subjects

Yalda Zafari

Publications and source records attributed to Yalda Zafari.

6 recordsLinked to original sources

arXiv2026

Energy-Mamba: A Physics-Constrained State-Space Model for Medical Image Classification

State-Space Models (SSMs), particularly Mamba, offer linear-time complexity for long-range dependencies, making them attractive for medical imaging with limited annotated data. However, adapting these sequential models to 2D images through unconstrained state evolution causes representational drift, the dynamic hidden state progressively loses fidelity to local image features. We introduce Energy-Mamba, integrating SSM dynamics with physics-informed constraints via a learnable potential energy function that quantifies compatibility between evolving states and static local features. Our Energy-Mamba Block introduces a gradient-based forcing term, computed dynamically via automatic differentiation, that pulls states toward low-energy configurations maintaining local visual fidelity. This formulation mirrors Hamiltonian dynamics: kinetic energy (SSM scan) plus potential energy (our constraint function) govern state trajectories. This architectural prior enables learning implicit constraints for robust, faithful representations, crucial in medical imaging where fine-grained local detail drives accurate diagnosis. Evaluated on four datasets (retinal OCT, chest X-ray, microscopy, abdominal CT), Energy-Mamba achieves state-of-the-art classification performance with significantly fewer parameters, demonstrating that physics-informed grounding can enhance both efficiency and representational quality in medical vision tasks.

eess.IV↗

arXiv2026

BreastMammo and DenseMammo: Benchmarks for Mammography Domain Generalization

Breast density classification is a critical component of breast cancer risk assessment, yet AI models often struggle to generalize across clinical sites due to vendor-specific acquisition styles. In this work, we introduce two new datasets, BreastMammo and DenseMammo, to facilitate robust multi-view mammography research. We propose a domain generalization framework that utilizes a foreground-only histogram matching protocol to resolve the domain shift issue arising from disparate clinical sources. Internal evaluation using a 5-fold cross-validation protocol demonstrates the efficacy of our approach, with the Swin Transformer backbone achieving a peak AUC of 98.32% for density classification. External evaluation on the TNMammo and LUMINA datasets demonstrates that the proposed approach consistently reduces domain shift, significantly outperforming prominent domain generalization paradigms, including MixStyle and Discrete-Fourier-Transform-based frameworks.

eess.IV↗

arXiv2025

Controllability Analysis of State Space-based Language Model

State-space models (SSMs), particularly Mamba, have become powerful architectures for sequence modeling, yet their internal dynamics remain poorly understood compared to attention-based models. We introduce and validate the Influence Score, a controllability-based metric derived from the discretized state-space parameters of Mamba and computed through a backward recurrence analogous to system observability. The score quantifies how strongly a token at position k affects all later states and outputs. We evaluate this measure across three Mamba variants: mamba-130m, mamba-2.8b, and mamba-2.8b-slimpj, using six experiments that test its sensitivity to temperature, prompt complexity, token type, layer depth, token position, and input perturbations. The results show three main insights: (1) the Influence Score increases with model size and training data, reflecting model capacity; (2) Mamba exhibits consistent architectural patterns, including recency bias and concentrated influence in mid-to-late layers; and (3) emergent behaviors appear only at scale, with mamba-2.8b-slimpj uniquely prioritizing content words and reducing internal influence in the presence of noise. These findings establish the Influence Score as a practical diagnostic tool for interpreting and comparing SSM-based language models.

cs.LG↗

arXiv2025

X-VMamba: Explainable Vision Mamba

State Space Models (SSMs), particularly the Mamba architecture, have recently emerged as powerful alternatives to Transformers for sequence modeling, offering linear computational complexity while achieving competitive performance. Yet, despite their effectiveness, understanding how these Vision SSMs process spatial information remains challenging due to the lack of transparent, attention-like mechanisms. To address this gap, we introduce a controllability-based interpretability framework that quantifies how different parts of the input sequence (tokens or patches) influence the internal state dynamics of SSMs. We propose two complementary formulations: a Jacobian-based method applicable to any SSM architecture that measures influence through the full chain of state propagation, and a Gramian-based approach for diagonal SSMs that achieves superior speed through closed-form analytical solutions. Both methods operate in a single forward pass with linear complexity, requiring no architectural modifications or hyperparameter tuning. We validate our framework through experiments on three diverse medical imaging modalities, demonstrating that SSMs naturally implement hierarchical feature refinement from diffuse low-level textures in early layers to focused, clinically meaningful patterns in deeper layers. Our analysis reveals domain-specific controllability signatures aligned with diagnostic criteria, progressive spatial selectivity across the network hierarchy, and the substantial influence of scanning strategies on attention patterns. Beyond medical imaging, we articulate applications spanning computer vision, natural language processing, and cross-domain tasks. Our framework establishes controllability analysis as a unified, foundational interpretability paradigm for SSMs across all domains. Code and analysis tools will be made available upon publication

cs.CV↗

arXiv2025

MammoClean: Toward Reproducible and Bias-Aware AI in Mammography through Dataset Harmonization

The development of clinically reliable artificial intelligence (AI) systems for mammography is hindered by profound heterogeneity in data quality, metadata standards, and population distributions across public datasets. This heterogeneity introduces dataset-specific biases that severely compromise the generalizability of the model, a fundamental barrier to clinical deployment. We present MammoClean, a public framework for standardization and bias quantification in mammography datasets. MammoClean standardizes case selection, image processing (including laterality and intensity correction), and unifies metadata into a consistent multi-view structure. We provide a comprehensive review of breast anatomy, imaging characteristics, and public mammography datasets to systematically identify key sources of bias. Applying MammoClean to three heterogeneous datasets (CBIS-DDSM, TOMPEI-CMMD, VinDr-Mammo), we quantify substantial distributional shifts in breast density and abnormality prevalence. Critically, we demonstrate the direct impact of data corruption: AI models trained on corrupted datasets exhibit significant performance degradation compared to their curated counterparts. By using MammoClean to identify and mitigate bias sources, researchers can construct unified multi-dataset training corpora that enable development of robust models with superior cross-domain generalization. MammoClean provides an essential, reproducible pipeline for bias-aware AI development in mammography, facilitating fairer comparisons and advancing the creation of safe, effective systems that perform equitably across diverse patient populations and clinical settings. The open-source code is publicly available from: https://github.com/Minds-R-Lab/MammoClean.

eess.IV↗

arXiv2025

A Hybrid CNN-VSSM model for Multi-View, Multi-Task Mammography Analysis: Robust Diagnosis with Attention-Based Fusion

Early and accurate interpretation of screening mammograms is essential for effective breast cancer detection, yet it remains a complex challenge due to subtle imaging findings and diagnostic ambiguity. Many existing AI approaches fall short by focusing on single view inputs or single-task outputs, limiting their clinical utility. To address these limitations, we propose a novel multi-view, multitask hybrid deep learning framework that processes all four standard mammography views and jointly predicts diagnostic labels and BI-RADS scores for each breast. Our architecture integrates a hybrid CNN VSSM backbone, combining convolutional encoders for rich local feature extraction with Visual State Space Models (VSSMs) to capture global contextual dependencies. To improve robustness and interpretability, we incorporate a gated attention-based fusion module that dynamically weights information across views, effectively handling cases with missing data. We conduct extensive experiments across diagnostic tasks of varying complexity, benchmarking our proposed hybrid models against baseline CNN architectures and VSSM models in both single task and multi task learning settings. Across all tasks, the hybrid models consistently outperform the baselines. In the binary BI-RADS 1 vs. 5 classification task, the shared hybrid model achieves an AUC of 0.9967 and an F1 score of 0.9830. For the more challenging ternary classification, it attains an F1 score of 0.7790, while in the five-class BI-RADS task, the best F1 score reaches 0.4904. These results highlight the effectiveness of the proposed hybrid framework and underscore both the potential and limitations of multitask learning for improving diagnostic performance and enabling clinically meaningful mammography analysis.

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