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Yang Li

Publications and source records attributed to Yang Li.

At least 847 records · Page 47Linked to original sources

Molecule Generation for Drug Design: a Graph Learning Perspective

Machine learning, particularly graph learning, is gaining increasing recognition for its transformative impact across various fields. One such promising application is in the realm of molecule design and discovery, notably within the pharmaceutical industry. Our survey offers a comprehensive overview of state-of-the-art methods in molecule design, particularly focusing on \emph{de novo} drug design, which incorporates (deep) graph learning techniques. We categorize these methods into three distinct groups: \emph{i)} \emph{all-at-once}, \emph{ii)} \emph{fragment-based}, and \emph{iii)} \emph{node-by-node}. Additionally, we introduce some key public datasets and outline the commonly used evaluation metrics for both the generation and optimization of molecules. In the end, we discuss the existing challenges in this field and suggest potential directions for future research.

cs.LG↗

Multi-Granularity Information Interaction Framework for Incomplete Utterance Rewriting

Recent approaches in Incomplete Utterance Rewriting (IUR) fail to capture the source of important words, which is crucial to edit the incomplete utterance, and introduce words from irrelevant utterances. We propose a novel and effective multi-task information interaction framework including context selection, edit matrix construction, and relevance merging to capture the multi-granularity of semantic information. Benefiting from fetching the relevant utterance and figuring out the important words, our approach outperforms existing state-of-the-art models on two benchmark datasets Restoration-200K and CANAND in this field. Code will be provided on \url{https://github.com/yanmenxue/QR}.

cs.CL↗

PPBFL: A Privacy Protected Blockchain-based Federated Learning Model

With the rapid development of machine learning and a growing concern for data privacy, federated learning has become a focal point of attention. However, attacks on model parameters and a lack of incentive mechanisms hinder the effectiveness of federated learning. Therefore, we propose A Privacy Protected Blockchain-based Federated Learning Model (PPBFL) to enhance the security of federated learning and encourage active participation of nodes in model training. Blockchain technology ensures the integrity of model parameters stored in the InterPlanetary File System (IPFS), providing protection against tampering. Within the blockchain, we introduce a Proof of Training Work (PoTW) consensus algorithm tailored for federated learning, aiming to incentive training nodes. This algorithm rewards nodes with greater computational power, promoting increased participation and effort in the federated learning process. A novel adaptive differential privacy algorithm is simultaneously applied to local and global models. This safeguards the privacy of local data at training clients, preventing malicious nodes from launching inference attacks. Additionally, it enhances the security of the global model, preventing potential security degradation resulting from the combination of numerous local models. The possibility of security degradation is derived from the composition theorem. By introducing reverse noise in the global model, a zero-bias estimate of differential privacy noise between local and global models is achieved. Furthermore, we propose a new mix transactions mechanism utilizing ring signature technology to better protect the identity privacy of local training clients. Security analysis and experimental results demonstrate that PPBFL, compared to baseline methods, not only exhibits superior model performance but also achieves higher security.

cs.CR↗

GloTSFormer: Global Video Text Spotting Transformer

Video Text Spotting (VTS) is a fundamental visual task that aims to predict the trajectories and content of texts in a video. Previous works usually conduct local associations and apply IoU-based distance and complex post-processing procedures to boost performance, ignoring the abundant temporal information and the morphological characteristics in VTS. In this paper, we propose a novel Global Video Text Spotting Transformer GloTSFormer to model the tracking problem as global associations and utilize the Gaussian Wasserstein distance to guide the morphological correlation between frames. Our main contributions can be summarized as three folds. 1). We propose a Transformer-based global tracking method GloTSFormer for VTS and associate multiple frames simultaneously. 2). We introduce a Wasserstein distance-based method to conduct positional associations between frames. 3). We conduct extensive experiments on public datasets. On the ICDAR2015 video dataset, GloTSFormer achieves 56.0 MOTA with 4.6 absolute improvement compared with the previous SOTA method and outperforms the previous Transformer-based method by a significant 8.3 MOTA.

cs.CV↗

Tackling Cooperative Incompatibility for Zero-Shot Human-AI Coordination

Securing coordination between AI agent and teammates (human players or AI agents) in contexts involving unfamiliar humans continues to pose a significant challenge in Zero-Shot Coordination. The issue of cooperative incompatibility becomes particularly prominent when an AI agent is unsuccessful in synchronizing with certain previously unknown partners. Traditional algorithms have aimed to collaborate with partners by optimizing fixed objectives within a population, fostering diversity in strategies and behaviors. However, these techniques may lead to learning loss and an inability to cooperate with specific strategies within the population, a phenomenon named cooperative incompatibility in learning. In order to solve cooperative incompatibility in learning and effectively address the problem in the context of ZSC, we introduce the Cooperative Open-ended LEarning (COLE) framework, which formulates open-ended objectives in cooperative games with two players using perspectives of graph theory to evaluate and pinpoint the cooperative capacity of each strategy. We present two practical algorithms, specifically \algo and \algoR, which incorporate insights from game theory and graph theory. We also show that COLE could effectively overcome the cooperative incompatibility from theoretical and empirical analysis. Subsequently, we created an online Overcooked human-AI experiment platform, the COLE platform, which enables easy customization of questionnaires, model weights, and other aspects. Utilizing the COLE platform, we enlist 130 participants for human experiments. Our findings reveal a preference for our approach over state-of-the-art methods using a variety of subjective metrics. Moreover, objective experimental outcomes in the Overcooked game environment indicate that our method surpasses existing ones when coordinating with previously unencountered AI agents and the human proxy model.

cs.AI↗

Learning Persistent Community Structures in Dynamic Networks via Topological Data Analysis

Dynamic community detection methods often lack effective mechanisms to ensure temporal consistency, hindering the analysis of network evolution. In this paper, we propose a novel deep graph clustering framework with temporal consistency regularization on inter-community structures, inspired by the concept of minimal network topological changes within short intervals. Specifically, to address the representation collapse problem, we first introduce MFC, a matrix factorization-based deep graph clustering algorithm that preserves node embedding. Based on static clustering results, we construct probabilistic community networks and compute their persistence homology, a robust topological measure, to assess structural similarity between them. Moreover, a novel neural network regularization TopoReg is introduced to ensure the preservation of topological similarity between inter-community structures over time intervals. Our approach enhances temporal consistency and clustering accuracy on real-world datasets with both fixed and varying numbers of communities. It is also a pioneer application of TDA in temporally persistent community detection, offering an insightful contribution to field of network analysis. Code and data are available at the public git repository: https://github.com/kundtx/MFC_TopoReg

cs.AI↗

Electro-optic frequency combs carrying orbital angular momentum

To date, orbital angular momentum (OAM) and optical frequency combs (OFCs) are two distinct fields of research without any association. Herein, we generated OFCs with an OAM on each comb line by applying electro-optic phase modulation to the OAM beam. We verified that the OAM characteristic of the sidebands is consistent with that of the pump light. Our study bridges two distinct research fields OFCs and OAM opening the door to various fundamental research avenues and applications, including large-capacity optical communications, high-security optical encryption, multi-dimensional photon entanglement, and synthetic dimensions.

physics.optics↗

Physical Parameter Calibration

Computer simulation models are widely used to study complex physical systems. A related fundamental topic is the inverse problem, also called calibration, which aims at learning about the values of parameters in the model based on observations. In most real applications, the parameters have specific physical meanings, and we call them physical parameters. To recognize the true underlying physical system, we need to effectively estimate such parameters. However, existing calibration methods cannot do this well due to the model identifiability problem. This paper proposes a semi-parametric model, called the discrepancy decomposition model, to describe the discrepancy between the physical system and the computer model. The proposed model possesses a clear interpretation, and more importantly, it is identifiable under mild conditions. Under this model, we present estimators of the physical parameters and the discrepancy, and then establish their asymptotic properties. Numerical examples show that the proposed method can better estimate the physical parameters than existing methods.

stat.ME↗

Effect of light injection on the security of practical quantum key distribution

Quantum key distribution (QKD) based on the fundamental laws of quantum physics can allow the distribution of secure keys between distant users. However, the imperfections in realistic devices may lead to potential security risks, which must be accurately characterized and considered in practical security analysis. High-speed optical modulators, being as one of the core components of practical QKD systems, can be used to prepare the required quantum states. Here, we find that optical modulators based on LiNbO3, including phase modulators and intensity modulators, are vulnerable to photorefractive effect caused by external light injection. By changing the power of external light, eavesdroppers can control the intensities of the prepared states, posing a potential threat to the security of QKD. We have experimentally demonstrated the influence of light injection on LiNbO3-based optical modulators and analyzed the security risks caused by the potential green light injection attack, along with the corresponding countermeasures.

quant-ph↗

Phoneme Hallucinator: One-shot Voice Conversion via Set Expansion

Voice conversion (VC) aims at altering a person's voice to make it sound similar to the voice of another person while preserving linguistic content. Existing methods suffer from a dilemma between content intelligibility and speaker similarity; i.e., methods with higher intelligibility usually have a lower speaker similarity, while methods with higher speaker similarity usually require plenty of target speaker voice data to achieve high intelligibility. In this work, we propose a novel method \textit{Phoneme Hallucinator} that achieves the best of both worlds. Phoneme Hallucinator is a one-shot VC model; it adopts a novel model to hallucinate diversified and high-fidelity target speaker phonemes based just on a short target speaker voice (e.g. 3 seconds). The hallucinated phonemes are then exploited to perform neighbor-based voice conversion. Our model is a text-free, any-to-any VC model that requires no text annotations and supports conversion to any unseen speaker. Objective and subjective evaluations show that \textit{Phoneme Hallucinator} outperforms existing VC methods for both intelligibility and speaker similarity.

cs.SD↗

High precision atom interferometer-based dynamic gravimeter measurement by eliminating the cross-coupling effect

A dynamic gravimeter with an atomic interferometer (AI) can perform absolute gravity measurements with high precision. AI-based dynamic gravity measurement is a type of joint measurement that uses AI sensors and a classical accelerometer. The coupling of the two sensors may degrade the measurement precision. In this study, we analyzed the cross-coupling effect and introduced a recovery vector to suppress this effect. We improved the phase noise of the interference fringe by a factor of 1.9 by performing marine gravity measurements using an AI-based gravimeter and optimizing the recovery vector. Marine gravity measurements were performed, and high gravity measurement precision was achieved. The external and inner coincidence accuracies of the gravity measurement are 0.42 mGal and 0.46 mGal, which were improved by factors of 4.18 and 4.21 by optimizing the cross-coupling effect.

physics.app-ph↗

Electro-optic frequency comb-enabled precise distance measurement with megahertz acquisition rate

Artificial intelligence empowered autonomous vehicles and robotics have to sense the fast-changing three-dimensional environment with high precision and speed. However, it is challenging for the state-of-the-art ambiguity-free light detection and ranging (LiDAR) techniques to achieve absolute distance measurement with simultaneous high precision and high acquisition rate. Here we demonstrate an electro-optic frequency comb-enabled precise absolute distance measurement method, repetition rate modulated frequency comb (RRMFC), with megahertz-level acquisition rate. To achieve RRMFC, we designed and fabricated an integrated lithium niobate phase modulator with a modulation length of 5 cm and a half-wave voltage of 1.52 V, leading to over 50 sidebands and a continuously tunable repetition rate. Leveraging these unique features, RRMFC can directly resolve distance in time domain, leading to an acquisition rate as high as 25 MHz and an Allan deviation down to 13.77 μm at an averaging time of 724 μs. Based on RRMFC, we achieved high-speed 3D imaging at millimeter-level precision with a single laser. RRMFC-based LiDAR allows the autonomous vehicles and robotics to sense the fine details of fast-changing environment with high precision.

physics.optics↗

Astrocyte-Enabled Advancements in Spiking Neural Networks for Large Language Modeling

Within the complex neuroarchitecture of the brain, astrocytes play crucial roles in development, structure, and metabolism. These cells regulate neural activity through tripartite synapses, directly impacting cognitive processes such as learning and memory. Despite the growing recognition of astrocytes' significance, traditional Spiking Neural Network (SNN) models remain predominantly neuron-centric, overlooking the profound influence of astrocytes on neural dynamics. Inspired by these biological insights, we have developed an Astrocyte-Modulated Spiking Unit (AM-SU), an innovative framework that integrates neuron-astrocyte interactions into the computational paradigm, demonstrating wide applicability across various hardware platforms. Our Astrocyte-Modulated Spiking Neural Network (AstroSNN) exhibits exceptional performance in tasks involving memory retention and natural language generation, particularly in handling long-term dependencies and complex linguistic structures. The design of AstroSNN not only enhances its biological authenticity but also introduces novel computational dynamics, enabling more effective processing of complex temporal dependencies. Furthermore, AstroSNN shows low latency, high throughput, and reduced memory usage in practical applications, making it highly suitable for resource-constrained environments. By successfully integrating astrocytic dynamics into intelligent neural networks, our work narrows the gap between biological plausibility and neural modeling, laying the groundwork for future biologically-inspired neural computing research that includes both neurons and astrocytes.

cs.NE↗

Semantic Draw Engineering for Text-to-Image Creation

Text-to-image generation is conducted through Generative Adversarial Networks (GANs) or transformer models. However, the current challenge lies in accurately generating images based on textual descriptions, especially in scenarios where the content and theme of the target image are ambiguous. In this paper, we propose a method that utilizes artificial intelligence models for thematic creativity, followed by a classification modeling of the actual painting process. The method involves converting all visual elements into quantifiable data structures before creating images. We evaluate the effectiveness of this approach in terms of semantic accuracy, image reproducibility, and computational efficiency, in comparison with existing image generation algorithms.

cs.HC↗

PGN: A perturbation generation network against deep reinforcement learning

Deep reinforcement learning has advanced greatly and applied in many areas. In this paper, we explore the vulnerability of deep reinforcement learning by proposing a novel generative model for creating effective adversarial examples to attack the agent. Our proposed model can achieve both targeted attacks and untargeted attacks. Considering the specificity of deep reinforcement learning, we propose the action consistency ratio as a measure of stealthiness, and a new measurement index of effectiveness and stealthiness. Experiment results show that our method can ensure the effectiveness and stealthiness of attack compared with other algorithms. Moreover, our methods are considerably faster and thus can achieve rapid and efficient verification of the vulnerability of deep reinforcement learning.

cs.LG↗

Relation-Aware Question Answering for Heterogeneous Knowledge Graphs

Multi-hop Knowledge Base Question Answering(KBQA) aims to find the answer entity in a knowledge graph (KG), which requires multiple steps of reasoning. Existing retrieval-based approaches solve this task by concentrating on the specific relation at different hops and predicting the intermediate entity within the reasoning path. During the reasoning process of these methods, the representation of relations are fixed but the initial relation representation may not be optimal. We claim they fail to utilize information from head-tail entities and the semantic connection between relations to enhance the current relation representation, which undermines the ability to capture information of relations in KGs. To address this issue, we construct a \textbf{dual relation graph} where each node denotes a relation in the original KG (\textbf{primal entity graph}) and edges are constructed between relations sharing same head or tail entities. Then we iteratively do primal entity graph reasoning, dual relation graph information propagation, and interaction between these two graphs. In this way, the interaction between entity and relation is enhanced, and we derive better entity and relation representations. Experiments on two public datasets, WebQSP and CWQ, show that our approach achieves a significant performance gain over the prior state-of-the-art. Our code is available on \url{https://github.com/yanmenxue/RAH-KBQA}.

cs.CL↗

H-ensemble: An Information Theoretic Approach to Reliable Few-Shot Multi-Source-Free Transfer

Multi-source transfer learning is an effective solution to data scarcity by utilizing multiple source tasks for the learning of the target task. However, access to source data and model details is limited in the era of commercial models, giving rise to the setting of multi-source-free (MSF) transfer learning that aims to leverage source domain knowledge without such access. As a newly defined problem paradigm, MSF transfer learning remains largely underexplored and not clearly formulated. In this work, we adopt an information theoretic perspective on it and propose a framework named H-ensemble, which dynamically learns the optimal linear combination, or ensemble, of source models for the target task, using a generalization of maximal correlation regression. The ensemble weights are optimized by maximizing an information theoretic metric for transferability. Compared to previous works, H-ensemble is characterized by: 1) its adaptability to a novel and realistic MSF setting for few-shot target tasks, 2) theoretical reliability, 3) a lightweight structure easy to interpret and adapt. Our method is empirically validated by ablation studies, along with extensive comparative analysis with other task ensemble and transfer learning methods. We show that the H-ensemble can successfully learn the optimal task ensemble, as well as outperform prior arts.

cs.LG↗

Assessing Estimation Uncertainty under Model Misspecification

Model misspecification is ubiquitous in data analysis because the data-generating process is often complex and mathematically intractable. Therefore, assessing estimation uncertainty and conducting statistical inference under a possibly misspecified working model is unavoidable. In such a case, classical methods such as bootstrap and asymptotic theory-based inference frequently fail since they rely heavily on the model assumptions. In this article, we provide a new bootstrap procedure, termed local residual bootstrap, to assess estimation uncertainty under model misspecification for generalized linear models. By resampling the residuals from the neighboring observations, we can approximate the sampling distribution of the statistic of interest accurately. Instead of relying on the score equations, the proposed method directly recreates the response variables so that we can easily conduct standard error estimation, confidence interval construction, hypothesis testing, and model evaluation and selection. It performs similarly to classical bootstrap when the model is correctly specified and provides a more accurate assessment of uncertainty under model misspecification, offering data analysts an easy way to guard against the impact of misspecified models. We establish desirable theoretical properties, such as the bootstrap validity, for the proposed method using the surrogate residuals. Numerical results and real data analysis further demonstrate the superiority of the proposed method.

stat.ME↗