arXiv subjects

Yang Song

Publications and source records attributed to Yang Song.

At least 253 records · Page 14Linked to original sources

arXiv2022

Toward Consistent and Efficient Map-based Visual-inertial Localization: Theory Framework and Filter Design

This paper focuses on designing a consistent and efficient filter for map-based visual-inertial localization. First, we propose a new Lie group with its algebra, based on which a novel invariant extended Kalman filter (invariant EKF) is designed. We theoretically prove that, when we do not consider the uncertainty of the map information, the proposed invariant EKF can naturally maintain the correct observability properties of the system. To consider the uncertainty of the map information, we introduce a Schmidt filter. With the Schmidt filter, the uncertainty of the map information can be taken into consideration to avoid over-confident estimation while the computation cost only increases linearly with the size of the map keyframes. In addition, we introduce an easily implemented observability-constrained technique because directly combining the invariant EKF with the Schmidt filter cannot maintain the correct observability properties of the system that considers the uncertainty of the map information. Finally, we validate our proposed system's high consistency, accuracy, and efficiency via extensive simulations and real-world experiments.

cs.RO↗

arXiv2022

Computer-Aided Extraction of Select MRI Markers of Cerebral Small Vessel Disease: A Systematic Review

Cerebral small vessel disease (CSVD) is a major vascular contributor to cognitive impairment in ageing, including dementias. Imaging remains the most promising method for in vivo studies of CSVD. To replace the subjective and laborious visual rating approaches, emerging studies have applied state-of-the-art artificial intelligence to extract imaging biomarkers of CSVD from MRI scans. We aimed to summarise published computer-aided methods to examine three imaging biomarkers of CSVD, namely cerebral microbleeds (CMB), dilated perivascular spaces (PVS), and lacunes of presumed vascular origin. Seventy-one classical image processing, classical machine learning, and deep learning studies were identified. CMB and PVS have been better studied, compared to lacunes. While good performance metrics have been achieved in local test datasets, there have not been generalisable pipelines validated in different research or clinical cohorts. Transfer learning and weak supervision techniques have been applied to accommodate the limitations in training data. Future studies could consider pooling data from multiple sources to increase diversity, and validating the performance of the methods using both image processing metrics and associations with clinical measures.

eess.IV↗

arXiv2022

Leveraging Search History for Improving Person-Job Fit

As the core technique of online recruitment platforms, person-job fit can improve hiring efficiency by accurately matching job positions with qualified candidates. However, existing studies mainly focus on the recommendation scenario, while neglecting another important channel for linking positions with job seekers, i.e. search. Intuitively, search history contains rich user behavior in job seeking, reflecting important evidence for job intention of users. In this paper, we present a novel Search History enhanced Person-Job Fit model, named as SHPJF. To utilize both text content from jobs/resumes and search histories from users, we propose two components with different purposes. For text matching component, we design a BERT-based text encoder for capturing the semantic interaction between resumes and job descriptions. For intention modeling component, we design two kinds of intention modeling approaches based on the Transformer architecture, either based on the click sequence or query text sequence. To capture underlying job intentions, we further propose an intention clustering technique to identify and summarize the major intentions from search logs. Extensive experiments on a large real-world recruitment dataset have demonstrated the effectiveness of our approach.

cs.IR↗

arXiv2022

Towards Bi-directional Skip Connections in Encoder-Decoder Architectures and Beyond

U-Net, as an encoder-decoder architecture with forward skip connections, has achieved promising results in various medical image analysis tasks. Many recent approaches have also extended U-Net with more complex building blocks, which typically increase the number of network parameters considerably. Such complexity makes the inference stage highly inefficient for clinical applications. Towards an effective yet economic segmentation network design, in this work, we propose backward skip connections that bring decoded features back to the encoder. Our design can be jointly adopted with forward skip connections in any encoder-decoder architecture forming a recurrence structure without introducing extra parameters. With the backward skip connections, we propose a U-Net based network family, namely Bi-directional O-shape networks, which set new benchmarks on multiple public medical imaging segmentation datasets. On the other hand, with the most plain architecture (BiO-Net), network computations inevitably increase along with the pre-set recurrence time. We have thus studied the deficiency bottleneck of such recurrent design and propose a novel two-phase Neural Architecture Search (NAS) algorithm, namely BiX-NAS, to search for the best multi-scale bi-directional skip connections. The ineffective skip connections are then discarded to reduce computational costs and speed up network inference. The finally searched BiX-Net yields the least network complexity and outperforms other state-of-the-art counterparts by large margins. We evaluate our methods on both 2D and 3D segmentation tasks in a total of six datasets. Extensive ablation studies have also been conducted to provide a comprehensive analysis for our proposed methods.

cs.CV↗

arXiv2022

Explainability in Graph Neural Networks: An Experimental Survey

Graph neural networks (GNNs) have been extensively developed for graph representation learning in various application domains. However, similar to all other neural networks models, GNNs suffer from the black-box problem as people cannot understand the mechanism underlying them. To solve this problem, several GNN explainability methods have been proposed to explain the decisions made by GNNs. In this survey, we give an overview of the state-of-the-art GNN explainability methods and how they are evaluated. Furthermore, we propose a new evaluation metric and conduct thorough experiments to compare GNN explainability methods on real world datasets. We also suggest future directions for GNN explainability.

cs.LG↗

arXiv2022

Density Ratio Estimation via Infinitesimal Classification

Density ratio estimation (DRE) is a fundamental machine learning technique for comparing two probability distributions. However, existing methods struggle in high-dimensional settings, as it is difficult to accurately compare probability distributions based on finite samples. In this work we propose DRE-\infty, a divide-and-conquer approach to reduce DRE to a series of easier subproblems. Inspired by Monte Carlo methods, we smoothly interpolate between the two distributions via an infinite continuum of intermediate bridge distributions. We then estimate the instantaneous rate of change of the bridge distributions indexed by time (the "time score") -- a quantity defined analogously to data (Stein) scores -- with a novel time score matching objective. Crucially, the learned time scores can then be integrated to compute the desired density ratio. In addition, we show that traditional (Stein) scores can be used to obtain integration paths that connect regions of high density in both distributions, improving performance in practice. Empirically, we demonstrate that our approach performs well on downstream tasks such as mutual information estimation and energy-based modeling on complex, high-dimensional datasets.

cs.LG↗

arXiv2022

GrainSpace: A Large-scale Dataset for Fine-grained and Domain-adaptive Recognition of Cereal Grains

Cereal grains are a vital part of human diets and are important commodities for people's livelihood and international trade. Grain Appearance Inspection (GAI) serves as one of the crucial steps for the determination of grain quality and grain stratification for proper circulation, storage and food processing, etc. GAI is routinely performed manually by qualified inspectors with the aid of some hand tools. Automated GAI has the benefit of greatly assisting inspectors with their jobs but has been limited due to the lack of datasets and clear definitions of the tasks. In this paper we formulate GAI as three ubiquitous computer vision tasks: fine-grained recognition, domain adaptation and out-of-distribution recognition. We present a large-scale and publicly available cereal grains dataset called GrainSpace. Specifically, we construct three types of device prototypes for data acquisition, and a total of 5.25 million images determined by professional inspectors. The grain samples including wheat, maize and rice are collected from five countries and more than 30 regions. We also develop a comprehensive benchmark based on semi-supervised learning and self-supervised learning techniques. To the best of our knowledge, GrainSpace is the first publicly released dataset for cereal grain inspection.

cs.CV↗

arXiv2022

DSNet: A Dual-Stream Framework for Weakly-Supervised Gigapixel Pathology Image Analysis

We present a novel weakly-supervised framework for classifying whole slide images (WSIs). WSIs, due to their gigapixel resolution, are commonly processed by patch-wise classification with patch-level labels. However, patch-level labels require precise annotations, which is expensive and usually unavailable on clinical data. With image-level labels only, patch-wise classification would be sub-optimal due to inconsistency between the patch appearance and image-level label. To address this issue, we posit that WSI analysis can be effectively conducted by integrating information at both high magnification (local) and low magnification (regional) levels. We auto-encode the visual signals in each patch into a latent embedding vector representing local information, and down-sample the raw WSI to hardware-acceptable thumbnails representing regional information. The WSI label is then predicted with a Dual-Stream Network (DSNet), which takes the transformed local patch embeddings and multi-scale thumbnail images as inputs and can be trained by the image-level label only. Experiments conducted on two large-scale public datasets demonstrate that our method outperforms all recent state-of-the-art weakly-supervised WSI classification methods.

cs.CV↗

arXiv2022

GeoDiff: a Geometric Diffusion Model for Molecular Conformation Generation

Predicting molecular conformations from molecular graphs is a fundamental problem in cheminformatics and drug discovery. Recently, significant progress has been achieved with machine learning approaches, especially with deep generative models. Inspired by the diffusion process in classical non-equilibrium thermodynamics where heated particles will diffuse from original states to a noise distribution, in this paper, we propose a novel generative model named GeoDiff for molecular conformation prediction. GeoDiff treats each atom as a particle and learns to directly reverse the diffusion process (i.e., transforming from a noise distribution to stable conformations) as a Markov chain. Modeling such a generation process is however very challenging as the likelihood of conformations should be roto-translational invariant. We theoretically show that Markov chains evolving with equivariant Markov kernels can induce an invariant distribution by design, and further propose building blocks for the Markov kernels to preserve the desirable equivariance property. The whole framework can be efficiently trained in an end-to-end fashion by optimizing a weighted variational lower bound to the (conditional) likelihood. Experiments on multiple benchmarks show that GeoDiff is superior or comparable to existing state-of-the-art approaches, especially on large molecules.

cs.LG↗

arXiv2022

Disentangling Long and Short-Term Interests for Recommendation

Modeling user's long-term and short-term interests is crucial for accurate recommendation. However, since there is no manually annotated label for user interests, existing approaches always follow the paradigm of entangling these two aspects, which may lead to inferior recommendation accuracy and interpretability. In this paper, to address it, we propose a Contrastive learning framework to disentangle Long and Short-term interests for Recommendation (CLSR) with self-supervision. Specifically, we first propose two separate encoders to independently capture user interests of different time scales. We then extract long-term and short-term interests proxies from the interaction sequences, which serve as pseudo labels for user interests. Then pairwise contrastive tasks are designed to supervise the similarity between interest representations and their corresponding interest proxies. Finally, since the importance of long-term and short-term interests is dynamically changing, we propose to adaptively aggregate them through an attention-based network for prediction. We conduct experiments on two large-scale real-world datasets for e-commerce and short-video recommendation. Empirical results show that our CLSR consistently outperforms all state-of-the-art models with significant improvements: GAUC is improved by over 0.01, and NDCG is improved by over 4%. Further counterfactual evaluations demonstrate that stronger disentanglement of long and short-term interests is successfully achieved by CLSR. The code and data are available at https://github.com/tsinghua-fib-lab/CLSR.

cs.IR↗

arXiv2022

SupWMA: Consistent and Efficient Tractography Parcellation of Superficial White Matter with Deep Learning

White matter parcellation classifies tractography streamlines into clusters or anatomically meaningful tracts to enable quantification and visualization. Most parcellation methods focus on the deep white matter (DWM), while fewer methods address the superficial white matter (SWM) due to its complexity. We propose a deep-learning-based framework, Superficial White Matter Analysis (SupWMA), that performs an efficient and consistent parcellation of 198 SWM clusters from whole-brain tractography. A point-cloud-based network is modified for our SWM parcellation task, and supervised contrastive learning enables more discriminative representations between plausible streamlines and outliers. We perform evaluation on a large tractography dataset with ground truth labels and on three independently acquired testing datasets from individuals across ages and health conditions. Compared to several state-of-the-art methods, SupWMA obtains a highly consistent and accurate SWM parcellation result. In addition, the computational speed of SupWMA is much faster than other methods.

cs.CV↗

arXiv2022

Multiple Sclerosis Lesion Analysis in Brain Magnetic Resonance Images: Techniques and Clinical Applications

Multiple sclerosis (MS) is a chronic inflammatory and degenerative disease of the central nervous system, characterized by the appearance of focal lesions in the white and gray matter that topographically correlate with an individual patient's neurological symptoms and signs. Magnetic resonance imaging (MRI) provides detailed in-vivo structural information, permitting the quantification and categorization of MS lesions that critically inform disease management. Traditionally, MS lesions have been manually annotated on 2D MRI slices, a process that is inefficient and prone to inter-/intra-observer errors. Recently, automated statistical imaging analysis techniques have been proposed to detect and segment MS lesions based on MRI voxel intensity. However, their effectiveness is limited by the heterogeneity of both MRI data acquisition techniques and the appearance of MS lesions. By learning complex lesion representations directly from images, deep learning techniques have achieved remarkable breakthroughs in the MS lesion segmentation task. Here, we provide a comprehensive review of state-of-the-art automatic statistical and deep-learning MS segmentation methods and discuss current and future clinical applications. Further, we review technical strategies, such as domain adaptation, to enhance MS lesion segmentation in real-world clinical settings.

cs.CV↗

arXiv2022

A Wearable ECG Monitor for Deep Learning Based Real-Time Cardiovascular Disease Detection

Cardiovascular disease has become one of the most significant threats endangering human life and health. Recently, Electrocardiogram (ECG) monitoring has been transformed into remote cardiac monitoring by Holter surveillance. However, the widely used Holter can bring a great deal of discomfort and inconvenience to the individuals who carry them. We developed a new wireless ECG patch in this work and applied a deep learning framework based on the Convolutional Neural Network (CNN) and Long Short-term Memory (LSTM) models. However, we find that the models using the existing techniques are not able to differentiate two main heartbeat types (Supraventricular premature beat and Atrial fibrillation) in our newly obtained dataset, resulting in low accuracy of 58.0 %. We proposed a semi-supervised method to process the badly labelled data samples with using the confidence-level-based training. The experiment results conclude that the proposed method can approach an average accuracy of 90.2 %, i.e., 5.4 % higher than the accuracy of conventional ECG classification methods.

eess.SP↗

arXiv2022

Partial Graph Reasoning for Neural Network Regularization

Regularizers help deep neural networks prevent feature co-adaptations. Dropout, as a commonly used regularization technique, stochastically disables neuron activations during network optimization. However, such complete feature disposal can affect the feature representation and network understanding. Toward better descriptions of latent representations, we present DropGraph that learns a regularization function by constructing a stand-alone graph from the backbone features. DropGraph first samples stochastic spatial feature vectors and then incorporates graph reasoning methods to generate feature map distortions. This add-on graph regularizes the network during training and can be completely skipped during inference. We provide intuitions on the linkage between graph reasoning and Dropout with further discussions on how partial graph reasoning method reduces feature correlations. To this end, we extensively study the modeling of graph vertex dependencies and the utilization of the graph for distorting backbone feature maps. DropGraph was validated on 4 tasks with a total of 8 different datasets. The experimental results show that our method outperforms other state-of-the-art regularizers while leaving the base model structure unmodified during inference.

cs.LG↗

arXiv2022

Decompose to Adapt: Cross-domain Object Detection via Feature Disentanglement

Recent advances in unsupervised domain adaptation (UDA) techniques have witnessed great success in cross-domain computer vision tasks, enhancing the generalization ability of data-driven deep learning architectures by bridging the domain distribution gaps. For the UDA-based cross-domain object detection methods, the majority of them alleviate the domain bias by inducing the domain-invariant feature generation via adversarial learning strategy. However, their domain discriminators have limited classification ability due to the unstable adversarial training process. Therefore, the extracted features induced by them cannot be perfectly domain-invariant and still contain domain-private factors, bringing obstacles to further alleviate the cross-domain discrepancy. To tackle this issue, we design a Domain Disentanglement Faster-RCNN (DDF) to eliminate the source-specific information in the features for detection task learning. Our DDF method facilitates the feature disentanglement at the global and local stages, with a Global Triplet Disentanglement (GTD) module and an Instance Similarity Disentanglement (ISD) module, respectively. By outperforming state-of-the-art methods on four benchmark UDA object detection tasks, our DDF method is demonstrated to be effective with wide applicability.

cs.CV↗

arXiv2022

SDEdit: Guided Image Synthesis and Editing with Stochastic Differential Equations

Guided image synthesis enables everyday users to create and edit photo-realistic images with minimum effort. The key challenge is balancing faithfulness to the user input (e.g., hand-drawn colored strokes) and realism of the synthesized image. Existing GAN-based methods attempt to achieve such balance using either conditional GANs or GAN inversions, which are challenging and often require additional training data or loss functions for individual applications. To address these issues, we introduce a new image synthesis and editing method, Stochastic Differential Editing (SDEdit), based on a diffusion model generative prior, which synthesizes realistic images by iteratively denoising through a stochastic differential equation (SDE). Given an input image with user guide of any type, SDEdit first adds noise to the input, then subsequently denoises the resulting image through the SDE prior to increase its realism. SDEdit does not require task-specific training or inversions and can naturally achieve the balance between realism and faithfulness. SDEdit significantly outperforms state-of-the-art GAN-based methods by up to 98.09% on realism and 91.72% on overall satisfaction scores, according to a human perception study, on multiple tasks, including stroke-based image synthesis and editing as well as image compositing.

cs.CV↗

arXiv2021

Multi-modal 3D Human Pose Estimation with 2D Weak Supervision in Autonomous Driving

3D human pose estimation (HPE) in autonomous vehicles (AV) differs from other use cases in many factors, including the 3D resolution and range of data, absence of dense depth maps, failure modes for LiDAR, relative location between the camera and LiDAR, and a high bar for estimation accuracy. Data collected for other use cases (such as virtual reality, gaming, and animation) may therefore not be usable for AV applications. This necessitates the collection and annotation of a large amount of 3D data for HPE in AV, which is time-consuming and expensive. In this paper, we propose one of the first approaches to alleviate this problem in the AV setting. Specifically, we propose a multi-modal approach which uses 2D labels on RGB images as weak supervision to perform 3D HPE. The proposed multi-modal architecture incorporates LiDAR and camera inputs with an auxiliary segmentation branch. On the Waymo Open Dataset, our approach achieves a 22% relative improvement over camera-only 2D HPE baseline, and 6% improvement over LiDAR-only model. Finally, careful ablation studies and parts based analysis illustrate the advantages of each of our contributions.

cs.CV↗

arXiv2021

The effect of viscosity and resistivity on Rayleigh-Taylor instability induced mixing in magnetized high energy density plasmas

This work numerically investigates the role of viscosity and resistivity on Rayleigh-Taylor instabilities in magnetized high-energy-density (HED) plasmas for a high Atwood number and high plasma beta regimes surveying across plasma beta and magnetic Prandtl numbers. The numerical simulations are performed using the visco-resistive magnetohydrodynamic (MHD) equations. Results presented here show that the inclusion of self-consistent viscosity and resistivity in the system drastically changes the growth of the Rayleigh-Taylor instability (RTI) as well as modifies its internal structure at smaller scales. It is seen here that the viscosity has a stabilizing effect on the RTI. Moreover, the viscosity inhibits the development of small scale structures and also modifies the morphology of the tip of the RTI spikes. On the other hand, the resistivity reduces the magnetic field stabilization supporting the development of small scale structures. The morphology of the RTI spikes is seen to be unaffected by the presence of resistivity in the system. An additional novelty of this work is in the disparate viscosity and resistivity profiles that may exist in HED plasmas and their impact on RTI growth, morphology, and the resulting turbulence spectra. Furthermore, this work shows that the dynamics of the magnetic field is independent of viscosity and likewise the resistivity does not affect the dissipation of enstrophy and kinetic energy. In addition, power-law scalings of enstrophy, kinetic energy, and magnetic field energy are provided in both injection range and inertial sub-range which could be useful for understanding RTI induced turbulent mixing in HED laboratory and astrophysical plasmas and could aid in the interpretation of observations of RTI-induced turbulence spectra.

physics.plasm-ph↗