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Yanhong Wang

Publications and source records attributed to Yanhong Wang.

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Heterogeneous network drug-target interaction prediction model based on graph wavelet transform and multi-level contrastive learning

Drug-target interaction (DTI) prediction is a core task in drug development and precision medicine in the biomedical field. However, traditional machine learning methods generally have the black box problem, which makes it difficult to reveal the deep correlation between the model decision mechanism and the interaction pattern between biological molecules. This study proposes a heterogeneous network drug target interaction prediction framework, integrating graph neural network and multi scale signal processing technology to construct a model with both efficient prediction and multi level interpretability. Its technical breakthroughs are mainly reflected in the following three dimensions:Local global feature collaborative perception module. Based on heterogeneous graph convolutional neural network (HGCN), a multi order neighbor aggregation strategy is designed.Multi scale graph signal decomposition and biological interpretation module. A deep hierarchical node feature transform (GWT) architecture is proposed.Contrastive learning combining multi dimensional perspectives and hierarchical representations. By comparing the learning models, the node representations from the two perspectives of HGCN and GWT are aligned and fused, so that the model can integrate multi dimensional information and improve the prediction robustness. Experimental results show that our framework shows excellent prediction performance on all datasets. This study provides a complete solution for drug target discovery from black box prediction to mechanism decoding, and its methodology has important reference value for modeling complex biomolecular interaction systems.

q-bio.QM

Haldane phase, field-induced magnetic ordering and Tomonaga-Luttinger liquid behavior in a spin-one chain compound NiC$_2$O$_4$$\cdot$2NH$_3$

We performed single-crystal magnetic susceptibility and $^1$H NMR measurements on a quasi-1D, spin-1 antiferromagnet NiC$_2$O$_4$$\cdot$2NH$_3$, with temperature down to 100 mK and with field up to 26 T. With field applied along the chain direction (crystalline $b$ direction), a spin gap is determined at low fields. Our susceptibility and spin-lattice relaxation measurements reveal a Haldane phase at low field, with an intrachain exchange coupling $J$ $\approx$ 35 K and an easy-plane single-ion anisotropy of 17 K. A field-induced antiferromagnetic (AFM) ordering emerges at fields of 2.1 T, which sets a three-dimensional (3D) quantum critical point (QCP). The high-temperature spin-lattice relaxation rates $1/T_1$ resolves an onset of Tomonaga-Luttinger liquid behavior at field above $3.5$ T, which characterizes a hidden 1D QCP.

cond-mat.str-el

Ba6RE2Ti4O17 (RE= Nd, Sm,Gd, Dy-Yb): A family of Rare-earth based layered triangular lattice magnets

Rare-earth-based triangular-lattice magnets provide the fertile ground to explore the exotic quantum magnetic state. Herein, we report a new family of RE-based triangular-lattice magnets Ba6RE2Ti4O17(RE= rare earth ions) crystallized into the hexagonal structure with space group of P63 mmc, where magnetic rare earth ions form an ideal triangular lattice within the ab-plane and stack in an AA -type fashion along the c-axis. The low-temperature magnetic susceptibility results reveal all the serial compounds have the dominant antiferromagnetic interactions and an absence of magnetic ordering down to 1.8 K. The magnetization and electron spin resonance results indicate distinct magnetic anisotropy for the compounds with different RE ions. Moreover, Ba6Nd2Ti4O17 single crystal is successfully grown and it exhibits strong Ising like anisotropy with magnetic easy-axis perpendicular to the triangle-lattice plane, being a candidate to explore quantum spin liquid state with dominant Ising-type interaction.

cond-mat.mtrl-sci

The Spike Gating Flow: A Hierarchical Structure Based Spiking Neural Network for Online Gesture Recognition

Action recognition is an exciting research avenue for artificial intelligence since it may be a game changer in the emerging industrial fields such as robotic visions and automobiles. However, current deep learning faces major challenges for such applications because of the huge computational cost and the inefficient learning. Hence, we develop a novel brain-inspired Spiking Neural Network (SNN) based system titled Spiking Gating Flow (SGF) for online action learning. The developed system consists of multiple SGF units which assembled in a hierarchical manner. A single SGF unit involves three layers: a feature extraction layer, an event-driven layer and a histogram-based training layer. To demonstrate the developed system capabilities, we employ a standard Dynamic Vision Sensor (DVS) gesture classification as a benchmark. The results indicate that we can achieve 87.5% accuracy which is comparable with Deep Learning (DL), but at smaller training/inference data number ratio 1.5:1. And only a single training epoch is required during the learning process. Meanwhile, to the best of our knowledge, this is the highest accuracy among the non-backpropagation algorithm based SNNs. At last, we conclude the few-shot learning paradigm of the developed network: 1) a hierarchical structure-based network design involves human prior knowledge; 2) SNNs for content based global dynamic feature detection.

cs.CV

Generating and Detecting High Frequency Liquid-Based Sound Resonances with Nanoplasmonics

We use metal nanostructures (nanoplasmonics) excited with dual frequency lasers to generate and detect high frequency (> 10 GHz) sound wave resonances in water. The difference frequency between the two lasers causes beating in the intensity, which results in a drop in the transmission through the nanostructure when an acoustic resonance is excited. By observing the resonance frequency shifts with changing nanostructure size, the transition from slow to fast sound in water is inferred, which has been measured by inelastic scattering methods in the past. The observed behavior shows remarkable similarities to a simple Debye model (without fitting parameters). The ability to directly excite high-frequency sound waves in water may unlock the secret of how the nanofluidic environment, that is typically considered to be extremely viscous, can efficiently support the energetic dynamics of life via protein vibrations at the nanometer scale.

physics.app-ph