arXiv subjects

Yi Yao

Publications and source records attributed to Yi Yao.

At least 19 recordsLinked to original sources

arXiv2026

A multi-agent system for spine MRI report generation from multi-sequence imaging

Spinal pathology is a leading cause of pain and disability worldwide. Spine MRI is central to clinical evaluation, yet its interpretation remains complex and time-consuming, requiring integration of information across multiple imaging sequences and anatomical regions. Despite recent advances in automated MRI analysis, effectively combining multi-sequence data while preserving sequence-specific diagnostic information remains an open challenge. Here we present SpineAgent, a multi-agent framework for spine MRI report generation built upon a multi-sequence foundation model trained on routine clinical data from 32,047 patients and 453,683 MRI series, comprising a total of 13,441,191 MRI slices. To accommodate diverse modalities of sequences, we first pre-train two DINOv3-based encoders separately on T1- and T2-weighted sequences. We then introduce a continual training strategy that learns a synthesizer to embed images of other sequences using the T1 and T2 encoders, producing patient-level embedding that integrates various signals across MRI sequences. Using these embeddings, SpineAgent achieves state-of-the-art performance, and demonstrates strong generalizability under cross-manufacturer and cross-cohort evaluation. Beyond classification, SpineAgent enables pathology localization by identifying findings-relevant slices and segmenting pathological regions. It also supports multimodal image-report retrieval, providing a solid foundation for scalable and explainable MRI report generation. We further integrate these validated capabilities of SpineAgent into 37 specialized agents. Finally, we incorporate their outputs as structured tokens within a Medical Report Agent trained end-to-end for report generation. Through both automated metrics and expert evaluation by five radiologists, SpineAgent achieves leading performance in spine MRI report generation.

cs.CV↗

arXiv2026

All-electron Dynamical Bethe-Salpeter Equation for Extended Systems with Atom-centered Orbital Basis

Solving Bethe-Salpeter equation (BSE) for the two-particle Green's function is the most widely used approach for taking into account the particle-hole (exciton) interaction in electronic excitation in the context of the many-body theory based on Green's function. In BSE calculations, the static approximation to the screened Coulomb interaction kernel is commonly employed. However, when the excitonic character is significant as typically indicated by a large exciton binding energy, dynamical screening effects become non-negligible, rendering the static approximation questionable. Because of the large computational cost due to the dense Brillouin zone integration necessary for convergence, solving the dynamical BSE for extended systems remains a significant challenge, especially when combined with GW calculation for the calculation of quasi-particle energies. In this work, we formulate the plane-wave based effective dielectric function method [Zhang, et al., Phys. Rev. B 107, 235205 (2023)] for the dynamical BSE calculation using atom-centered orbitals as basis functions. We implement this approach in our recently developed all-electron numerical atom-centered orbital (NAO) implementation of BSE@GW [Zhou, et. al. J. Chem. Theory Comput. 21, 291 (2025)] for extended systems. We validate our all-electron NAO-based implementation of the dynamical BSE method, and we then discuss its realistic application to molecular crystal of naphthalene by performing the dynamical BSE@G0W0 calculation.

physics.chem-ph↗

arXiv2026

HyperLiDAR: Adaptive Post-Deployment LiDAR Segmentation via Hyperdimensional Computing

LiDAR semantic segmentation plays a pivotal role in 3D scene understanding for edge applications such as autonomous driving. However, significant challenges remain for real-world deployments, particularly for on-device post-deployment adaptation. Real-world environments can shift as the system navigates through different locations, leading to substantial performance degradation without effective and timely model adaptation. Furthermore, edge systems operate under strict computational and energy constraints, making it infeasible to adapt conventional segmentation models (based on large neural networks) directly on-device. To address the above challenges, we introduce HyperLiDAR, the first lightweight, post-deployment LiDAR segmentation framework based on Hyperdimensional Computing (HDC). The design of HyperLiDAR fully leverages the fast learning and high efficiency of HDC, inspired by how the human brain processes information. To further improve the adaptation efficiency, we identify the high data volume per scan as a key bottleneck and introduce a buffer selection strategy that focuses learning on the most informative points. We conduct extensive evaluations on two state-of-the-art LiDAR segmentation benchmarks and two representative devices. Our results show that HyperLiDAR outperforms or achieves comparable adaptation performance to state-of-the-art segmentation methods, while achieving up to a 13.8x speedup in retraining.

cs.CV↗

arXiv2026

QueryPlot: Generating Geological Evidence Layers using Natural Language Queries for Mineral Exploration

Mineral prospectivity mapping requires synthesizing heterogeneous geological knowledge, including textual deposit models and geospatial datasets, to identify regions likely to host specific mineral deposit types. This process is traditionally manual and knowledge-intensive. We present QueryPlot, a semantic retrieval and mapping framework that integrates large-scale geological text corpora with geologic map data using modern Natural Language Processing techniques. We curate descriptive deposit models for over 120 deposit types and transform the State Geologic Map Compilation (SGMC) polygons into structured textual representations. Given a user-defined natural language query, the system encodes both queries and region descriptions using a pretrained embedding model and computes semantic similarity scores to rank and spatially visualize regions as continuous evidence layers. QueryPlot supports compositional querying over deposit characteristics, enabling aggregation of multiple similarity-derived layers for multi-criteria prospectivity analysis. In a case study on tungsten skarn deposits, we demonstrate that embedding-based retrieval achieves high recall of known occurrences and produces prospective regions that closely align with expert-defined permissive tracts. Furthermore, similarity scores can be incorporated as additional features in supervised learning pipelines, yielding measurable improvements in classification performance. QueryPlot is implemented as a web-based system supporting interactive querying, visualization, and export of GIS-compatible prospectivity layers.To support future research, we have made the source code and datasets used in this study publicly available.

cs.CL↗

arXiv2026

O-Researcher: An Open Ended Deep Research Model via Multi-Agent Distillation and Agentic RL

The performance gap between closed-source and open-source large language models (LLMs) is largely attributed to disparities in access to high-quality training data. To bridge this gap, we introduce a novel framework for the automated synthesis of sophisticated, research-grade instructional data. Our approach centers on a multi-agent workflow where collaborative AI agents simulate complex tool-integrated reasoning to generate diverse and high-fidelity data end-to-end. Leveraging this synthesized data, we develop a two-stage training strategy that integrates supervised fine-tuning with a novel reinforcement learning method, designed to maximize model alignment and capability. Extensive experiments demonstrate that our framework empowers open-source models across multiple scales, enabling them to achieve new state-of-the-art performance on the major deep research benchmark. This work provides a scalable and effective pathway for advancing open-source LLMs without relying on proprietary data or models.

cs.CL↗

arXiv2025

CookAnything: A Framework for Flexible and Consistent Multi-Step Recipe Image Generation

Cooking is a sequential and visually grounded activity, where each step such as chopping, mixing, or frying carries both procedural logic and visual semantics. While recent diffusion models have shown strong capabilities in text-to-image generation, they struggle to handle structured multi-step scenarios like recipe illustration. Additionally, current recipe illustration methods are unable to adjust to the natural variability in recipe length, generating a fixed number of images regardless of the actual instructions structure. To address these limitations, we present CookAnything, a flexible and consistent diffusion-based framework that generates coherent, semantically distinct image sequences from textual cooking instructions of arbitrary length. The framework introduces three key components: (1) Step-wise Regional Control (SRC), which aligns textual steps with corresponding image regions within a single denoising process; (2) Flexible RoPE, a step-aware positional encoding mechanism that enhances both temporal coherence and spatial diversity; and (3) Cross-Step Consistency Control (CSCC), which maintains fine-grained ingredient consistency across steps. Experimental results on recipe illustration benchmarks show that CookAnything performs better than existing methods in training-based and training-free settings. The proposed framework supports scalable, high-quality visual synthesis of complex multi-step instructions and holds significant potential for broad applications in instructional media, and procedural content creation.

cs.CV↗

arXiv2025

The maximal destabilizers for Chow and K-stability

Donaldson showed that the constant scalar curvature K\"ahler metrics can be quantized by the balanced Hermitian norms on the spaces of global sections. We explore an analogous problem in the unstable situation. For a K-unstable manifold $(X,L)$, its projective embedding via $\left|kL\right|$ will be Chow-unstable when $k$ is sufficiently large and divisible. There is a unique filtration on $\mathrm{H}^{0}(X,kL)$, that corresponds to the maximal destabilizer for Chow-stability of the embedded variety. On the other hand, there is a maximal destabilizer for K-stability after the work of Xia and Li, which corresponds to the steepest descent direction of K-energy. Based on Boucksom-Jonsson's non-Archimedean pluripotential theory and some idealistic assumptions, we provide a route to show that maximal K-destabilizers are quantized by the maximal Chow-destabilizers.

math.AG↗

arXiv2025

Transforming Causality: Transformer-Based Temporal Causal Discovery with Prior Knowledge Integration

We introduce a novel framework for temporal causal discovery and inference that addresses two key challenges: complex nonlinear dependencies and spurious correlations. Our approach employs a multi-layer Transformer-based time-series forecaster to capture long-range, nonlinear temporal relationships among variables. After training, we extract the underlying causal structure and associated time lags from the forecaster using gradient-based analysis, enabling the construction of a causal graph. To mitigate the impact of spurious causal relationships, we introduce a prior knowledge integration mechanism based on attention masking, which consistently enforces user-excluded causal links across multiple Transformer layers. Extensive experiments show that our method significantly outperforms other state-of-the-art approaches, achieving a 12.8% improvement in F1-score for causal discovery and 98.9% accuracy in estimating causal lags.

cs.LG↗

arXiv2025

Chain-of-Agents: End-to-End Agent Foundation Models via Multi-Agent Distillation and Agentic RL

Recent advances in large language models (LLMs) and multi-agent systems have demonstrated remarkable capabilities in complex problem-solving tasks such as deep research, vibe coding, and mathematical reasoning. However, most existing multi-agent systems are built upon manual prompt/workflow engineering with sophisticated agent frameworks, making them computationally inefficient, less capable, and can not benefit from data-centric learning. In this work, we introduce Chain-of-Agents (CoA), a novel paradigm of LLM reasoning that enables native end-to-end complex problem-solving in the same way as a multi-agent system (i.e., multi-turn problem solving with multiple tools and multiple agents) within one model. In chain-of-agents problem-solving, the model dynamically activates different tool agents and role-playing agents to simulate multi-agent collaboration in an end-to-end fashion. To elicit end-to-end chain-of-agents problem-solving abilities in LLMs, we introduce a multi-agent distillation framework to distill state-of-the-art multi-agent systems into chain-of-agents trajectories for agentic supervised fine-tuning. We then use agentic reinforcement learning on verifiable agentic tasks to further improve the models' capabilities on chain-of-agents problem solving. We call the resulting models Agent Foundation Models (AFMs). Our empirical studies demonstrate that AFM establishes new state-of-the-art performance across diverse benchmarks in both web agent and code agent settings. We make the entire research, including the model weights, code for training and evaluation, and the training data, fully open-sourced, which offers a solid starting point for future research on agent models and agentic RL.

cs.AI↗

arXiv2025

OAgents: An Empirical Study of Building Effective Agents

Recently, Agentic AI has become an increasingly popular research field. However, we argue that current agent research practices lack standardization and scientific rigor, making it hard to conduct fair comparisons among methods. As a result, it is still unclear how different design choices in agent frameworks affect effectiveness, and measuring their progress remains challenging. In this work, we conduct a systematic empirical study on GAIA benchmark and BrowseComp to examine the impact of popular design choices in key agent components in a fair and rigorous manner. We find that the lack of a standard evaluation protocol makes previous works, even open-sourced ones, non-reproducible, with significant variance between random runs. Therefore, we introduce a more robust evaluation protocol to stabilize comparisons. Our study reveals which components and designs are crucial for effective agents, while others are redundant, despite seeming logical. Based on our findings, we build and open-source OAgents, a new foundation agent framework that achieves state-of-the-art performance among open-source projects. OAgents offers a modular design for various agent components, promoting future research in Agentic AI.

cs.AI↗

arXiv2025

Foreground Focus: Enhancing Coherence and Fidelity in Camouflaged Image Generation

Camouflaged image generation is emerging as a solution to data scarcity in camouflaged vision perception, offering a cost-effective alternative to data collection and labeling. Recently, the state-of-the-art approach successfully generates camouflaged images using only foreground objects. However, it faces two critical weaknesses: 1) the background knowledge does not integrate effectively with foreground features, resulting in a lack of foreground-background coherence (e.g., color discrepancy); 2) the generation process does not prioritize the fidelity of foreground objects, which leads to distortion, particularly for small objects. To address these issues, we propose a Foreground-Aware Camouflaged Image Generation (FACIG) model. Specifically, we introduce a Foreground-Aware Feature Integration Module (FAFIM) to strengthen the integration between foreground features and background knowledge. In addition, a Foreground-Aware Denoising Loss is designed to enhance foreground reconstruction supervision. Experiments on various datasets show our method outperforms previous methods in overall camouflaged image quality and foreground fidelity.

cs.CV↗

arXiv2025

A Concise Survey on Lane Topology Reasoning for HD Mapping

Lane topology reasoning techniques play a crucial role in high-definition (HD) mapping and autonomous driving applications. While recent years have witnessed significant advances in this field, there has been limited effort to consolidate these works into a comprehensive overview. This survey systematically reviews the evolution and current state of lane topology reasoning methods, categorizing them into three major paradigms: procedural modeling-based methods, aerial imagery-based methods, and onboard sensors-based methods. We analyze the progression from early rule-based approaches to modern learning-based solutions utilizing transformers, graph neural networks (GNNs), and other deep learning architectures. The paper examines standardized evaluation metrics, including road-level measures (APLS and TLTS score), and lane-level metrics (DET and TOP score), along with performance comparisons on benchmark datasets such as OpenLane-V2. We identify key technical challenges, including dataset availability and model efficiency, and outline promising directions for future research. This comprehensive review provides researchers and practitioners with insights into the theoretical frameworks, practical implementations, and emerging trends in lane topology reasoning for HD mapping applications.

cs.RO↗

arXiv2025

L2COcc: Lightweight Camera-Centric Semantic Scene Completion via Distillation of LiDAR Model

Semantic Scene Completion (SSC) constitutes a pivotal element in autonomous driving perception systems, tasked with inferring the 3D semantic occupancy of a scene from sensory data. To improve accuracy, prior research has implemented various computationally demanding and memory-intensive 3D operations, imposing significant computational requirements on the platform during training and testing. This paper proposes L2COcc, a lightweight camera-centric SSC framework that also accommodates LiDAR inputs. With our proposed efficient voxel transformer (EVT) and cross-modal knowledge modules, including feature similarity distillation (FSD), TPV distillation (TPVD) and prediction alignment distillation (PAD), our method substantially reduce computational burden while maintaining high accuracy. The experimental evaluations demonstrate that our proposed method surpasses the current state-of-the-art vision-based SSC methods regarding accuracy on both the SemanticKITTI and SSCBench-KITTI-360 benchmarks, respectively. Additionally, our method is more lightweight, exhibiting a reduction in both memory consumption and inference time by over 23% compared to the current state-of-the-arts method. Code is available at our project page:https://studyingfufu.github.io/L2COcc/.

cs.CV↗

arXiv2025

RecipeGen: A Benchmark for Real-World Recipe Image Generation

Recipe image generation is an important challenge in food computing, with applications from culinary education to interactive recipe platforms. However, there is currently no real-world dataset that comprehensively connects recipe goals, sequential steps, and corresponding images. To address this, we introduce RecipeGen, the first real-world goal-step-image benchmark for recipe generation, featuring diverse ingredients, varied recipe steps, multiple cooking styles, and a broad collection of food categories. Data is in https://github.com/zhangdaxia22/RecipeGen.

cs.CV↗

arXiv2025

A high-performance and portable implementation of the SISSO method for CPUs and GPUs

SISSO (sure-independence screening and sparsifying operator) is an artificial intelligence (AI) method based on symbolic regression and compressed sensing widely used in materials science research. SISSO++ is its C++ implementation that employs MPI and OpenMP for parallelization, rendering it well-suited for high-performance computing (HPC) environments. As heterogeneous hardware becomes mainstream in the HPC and AI fields, we chose to port the SISSO++ code to GPUs using the Kokkos performance-portable library. Kokkos allows us to maintain a single codebase for both Nvidia and AMD GPUs, significantly reducing the maintenance effort. In this work, we summarize the necessary code changes we did to achieve hardware and performance portability. This is accompanied by performance benchmarks on Nvidia and AMD GPUs. We demonstrate the speedups obtained from using GPUs across the three most time-consuming parts of our code.

cs.PF↗

arXiv2025

PedDet: Adaptive Spectral Optimization for Multimodal Pedestrian Detection

Pedestrian detection in intelligent transportation systems has made significant progress but faces two critical challenges: (1) insufficient fusion of complementary information between visible and infrared spectra, particularly in complex scenarios, and (2) sensitivity to illumination changes, such as low-light or overexposed conditions, leading to degraded performance. To address these issues, we propose PedDet, an adaptive spectral optimization complementarity framework specifically enhanced and optimized for multispectral pedestrian detection. PedDet introduces the Multi-scale Spectral Feature Perception Module (MSFPM) to adaptively fuse visible and infrared features, enhancing robustness and flexibility in feature extraction. Additionally, the Illumination Robustness Feature Decoupling Module (IRFDM) improves detection stability under varying lighting by decoupling pedestrian and background features. We further design a contrastive alignment to enhance intermodal feature discrimination. Experiments on LLVIP and MSDS datasets demonstrate that PedDet achieves state-of-the-art performance, improving the mAP by 6.6% with superior detection accuracy even in low-light conditions, marking a significant step forward for road safety. Code will be available at https://github.com/AIGeeksGroup/PedDet.

cs.CV↗

arXiv2025

Solvers for Large-Scale Electronic Structure Theory: ELPA and ELSI

In this contribution, we give an overview of the ELPA library and ELSI interface, which are crucial elements for large-scale electronic structure calculations in FHI-aims. ELPA is a key solver library that provides efficient solutions for both standard and generalized eigenproblems, which are central to the Kohn-Sham formalism in density functional theory (DFT). It supports CPU and GPU architectures, with full support for NVIDIA and AMD GPUs, and ongoing development for Intel GPUs. Here we also report the results of recent optimizations, leading to significant improvements in GPU performance for the generalized eigenproblem. ELSI is an open-source software interface layer that creates a well-defined connection between "user" electronic structure codes and "solver" libraries for the Kohn-Sham problem, abstracting the step between Hamilton and overlap matrices (as input to ELSI and the respective solvers) and eigenvalues and eigenvectors or density matrix solutions (as output to be passed back to the "user" electronic structure code). In addition to ELPA, ELSI supports solvers including LAPACK and MAGMA, the PEXSI and NTPoly libraries (which bypass an explicit eigenvalue solution), and several others.

cond-mat.mtrl-sci↗

arXiv2025

Perspective-Aware Teaching: Adapting Knowledge for Heterogeneous Distillation

Knowledge distillation (KD) involves transferring knowledge from a pre-trained heavy teacher model to a lighter student model, thereby reducing the inference cost while maintaining comparable effectiveness. Prior KD techniques typically assume homogeneity between the teacher and student models. However, as technology advances, a wide variety of architectures have emerged, ranging from initial Convolutional Neural Networks (CNNs) to Vision Transformers (ViTs), and Multi-Level Perceptrons (MLPs). Consequently, developing a universal KD framework compatible with any architecture has become an important research topic. In this paper, we introduce a perspective-aware teaching (PAT) KD framework to enable feature distillation across diverse architectures. Our framework comprises two key components. First, we design prompt tuning blocks that incorporate student feedback, allowing teacher features to adapt to the student model's learning process. Second, we propose region-aware attention to mitigate the view mismatch problem between heterogeneous architectures. By leveraging these two modules, effective distillation of intermediate features can be achieved across heterogeneous architectures. Extensive experiments on CIFAR, ImageNet, and COCO demonstrate the superiority of the proposed method. Our code is available at https://github.com/jimmylin0979/PAT.git.

cs.CV↗