arXiv subjects

Yinghuan Shi

Publications and source records attributed to Yinghuan Shi.

At least 91 records · Page 5Linked to original sources

arXiv2022

Generalizable Medical Image Segmentation via Random Amplitude Mixup and Domain-Specific Image Restoration

For medical image analysis, segmentation models trained on one or several domains lack generalization ability to unseen domains due to discrepancies between different data acquisition policies. We argue that the degeneration in segmentation performance is mainly attributed to overfitting to source domains and domain shift. To this end, we present a novel generalizable medical image segmentation method. To be specific, we design our approach as a multi-task paradigm by combining the segmentation model with a self-supervision domain-specific image restoration (DSIR) module for model regularization. We also design a random amplitude mixup (RAM) module, which incorporates low-level frequency information of different domain images to synthesize new images. To guide our model be resistant to domain shift, we introduce a semantic consistency loss. We demonstrate the performance of our method on two public generalizable segmentation benchmarks in medical images, which validates our method could achieve the state-of-the-art performance.

cs.CV↗

arXiv2022

A Novel Mix-normalization Method for Generalizable Multi-source Person Re-identification

Person re-identification (Re-ID) has achieved great success in the supervised scenario. However, it is difficult to directly transfer the supervised model to arbitrary unseen domains due to the model overfitting to the seen source domains. In this paper, we aim to tackle the generalizable multi-source person Re-ID task (i.e., there are multiple available source domains, and the testing domain is unseen during training) from the data augmentation perspective, thus we put forward a novel method, termed MixNorm, which consists of domain-aware mix-normalization (DMN) and domain-ware center regularization (DCR). Different from the conventional data augmentation, the proposed domain-aware mix-normalization to enhance the diversity of features during training from the normalization view of the neural network, which can effectively alleviate the model overfitting to the source domains, so as to boost the generalization capability of the model in the unseen domain. To better learn the domain-invariant model, we further develop the domain-aware center regularization to better map the produced diverse features into the same space. Extensive experiments on multiple benchmark datasets validate the effectiveness of the proposed method and show that the proposed method can outperform the state-of-the-art methods. Besides, further analysis also reveals the superiority of the proposed method.

cs.CV↗

arXiv2022

Generalizable Cross-modality Medical Image Segmentation via Style Augmentation and Dual Normalization

For medical image segmentation, imagine if a model was only trained using MR images in source domain, how about its performance to directly segment CT images in target domain? This setting, namely generalizable cross-modality segmentation, owning its clinical potential, is much more challenging than other related settings, e.g., domain adaptation. To achieve this goal, we in this paper propose a novel dual-normalization model by leveraging the augmented source-similar and source-dissimilar images during our generalizable segmentation. To be specific, given a single source domain, aiming to simulate the possible appearance change in unseen target domains, we first utilize a nonlinear transformation to augment source-similar and source-dissimilar images. Then, to sufficiently exploit these two types of augmentations, our proposed dual-normalization based model employs a shared backbone yet independent batch normalization layer for separate normalization. Afterward, we put forward a style-based selection scheme to automatically choose the appropriate path in the test stage. Extensive experiments on three publicly available datasets, i.e., BraTS, Cross-Modality Cardiac, and Abdominal Multi-Organ datasets, have demonstrated that our method outperforms other state-of-the-art domain generalization methods. Code is available at https://github.com/zzzqzhou/Dual-Normalization.

cs.CV↗

arXiv2022

ST++: Make Self-training Work Better for Semi-supervised Semantic Segmentation

Self-training via pseudo labeling is a conventional, simple, and popular pipeline to leverage unlabeled data. In this work, we first construct a strong baseline of self-training (namely ST) for semi-supervised semantic segmentation via injecting strong data augmentations (SDA) on unlabeled images to alleviate overfitting noisy labels as well as decouple similar predictions between the teacher and student. With this simple mechanism, our ST outperforms all existing methods without any bells and whistles, e.g., iterative re-training. Inspired by the impressive results, we thoroughly investigate the SDA and provide some empirical analysis. Nevertheless, incorrect pseudo labels are still prone to accumulate and degrade the performance. To this end, we further propose an advanced self-training framework (namely ST++), that performs selective re-training via prioritizing reliable unlabeled images based on holistic prediction-level stability. Concretely, several model checkpoints are saved in the first stage supervised training, and the discrepancy of their predictions on the unlabeled image serves as a measurement for reliability. Our image-level selection offers holistic contextual information for learning. We demonstrate that it is more suitable for segmentation than common pixel-wise selection. As a result, ST++ further boosts the performance of our ST. Code is available at https://github.com/LiheYoung/ST-PlusPlus.

cs.CV↗

arXiv2022

Feature-based Style Randomization for Domain Generalization

As a recent noticeable topic, domain generalization (DG) aims to first learn a generic model on multiple source domains and then directly generalize to an arbitrary unseen target domain without any additional adaption. In previous DG models, by generating virtual data to supplement observed source domains, the data augmentation based methods have shown its effectiveness. To simulate the possible unseen domains, most of them enrich the diversity of original data via image-level style transformation. However, we argue that the potential styles are hard to be exhaustively illustrated and fully augmented due to the limited referred styles, leading the diversity could not be always guaranteed. Unlike image-level augmentation, we in this paper develop a simple yet effective feature-based style randomization module to achieve feature-level augmentation, which can produce random styles via integrating random noise into the original style. Compared with existing image-level augmentation, our feature-level augmentation favors a more goal-oriented and sample-diverse way. Furthermore, to sufficiently explore the efficacy of the proposed module, we design a novel progressive training strategy to enable all parameters of the network to be fully trained. Extensive experiments on three standard benchmark datasets, i.e., PACS, VLCS and Office-Home, highlight the superiority of our method compared to the state-of-the-art methods.

cs.CV↗

arXiv2021

Inconsistency-aware Uncertainty Estimation for Semi-supervised Medical Image Segmentation

In semi-supervised medical image segmentation, most previous works draw on the common assumption that higher entropy means higher uncertainty. In this paper, we investigate a novel method of estimating uncertainty. We observe that, when assigned different misclassification costs in a certain degree, if the segmentation result of a pixel becomes inconsistent, this pixel shows a relative uncertainty in its segmentation. Therefore, we present a new semi-supervised segmentation model, namely, conservative-radical network (CoraNet in short) based on our uncertainty estimation and separate self-training strategy. In particular, our CoraNet model consists of three major components: a conservative-radical module (CRM), a certain region segmentation network (C-SN), and an uncertain region segmentation network (UC-SN) that could be alternatively trained in an end-to-end manner. We have extensively evaluated our method on various segmentation tasks with publicly available benchmark datasets, including CT pancreas, MR endocardium, and MR multi-structures segmentation on the ACDC dataset. Compared with the current state of the art, our CoraNet has demonstrated superior performance. In addition, we have also analyzed its connection with and difference from conventional methods of uncertainty estimation in semi-supervised medical image segmentation.

cs.CV↗

arXiv2021

Mining Latent Classes for Few-shot Segmentation

Few-shot segmentation (FSS) aims to segment unseen classes given only a few annotated samples. Existing methods suffer the problem of feature undermining, i.e. potential novel classes are treated as background during training phase. Our method aims to alleviate this problem and enhance the feature embedding on latent novel classes. In our work, we propose a novel joint-training framework. Based on conventional episodic training on support-query pairs, we add an additional mining branch that exploits latent novel classes via transferable sub-clusters, and a new rectification technique on both background and foreground categories to enforce more stable prototypes. Over and above that, our transferable sub-cluster has the ability to leverage extra unlabeled data for further feature enhancement. Extensive experiments on two FSS benchmarks demonstrate that our method outperforms previous state-of-the-art by a large margin of 3.7% mIOU on PASCAL-5i and 7.0% mIOU on COCO-20i at the cost of 74% fewer parameters and 2.5x faster inference speed. The source code is available at https://github.com/LiheYoung/MiningFSS.

cs.CV↗

arXiv2021

Manifold Alignment for Semantically Aligned Style Transfer

Most existing style transfer methods follow the assumption that styles can be represented with global statistics (e.g., Gram matrices or covariance matrices), and thus address the problem by forcing the output and style images to have similar global statistics. An alternative is the assumption of local style patterns, where algorithms are designed to swap similar local features of content and style images. However, the limitation of these existing methods is that they neglect the semantic structure of the content image which may lead to corrupted content structure in the output. In this paper, we make a new assumption that image features from the same semantic region form a manifold and an image with multiple semantic regions follows a multi-manifold distribution. Based on this assumption, the style transfer problem is formulated as aligning two multi-manifold distributions and a Manifold Alignment based Style Transfer (MAST) framework is proposed. The proposed framework allows semantically similar regions between the output and the style image share similar style patterns. Moreover, the proposed manifold alignment method is flexible to allow user editing or using semantic segmentation maps as guidance for style transfer. To allow the method to be applicable to photorealistic style transfer, we propose a new adaptive weight skip connection network structure to preserve the content details. Extensive experiments verify the effectiveness of the proposed framework for both artistic and photorealistic style transfer. Code is available at https://github.com/NJUHuoJing/MAST.

cs.CV↗

arXiv2021

Generalizable Model-agnostic Semantic Segmentation via Target-specific Normalization

Semantic segmentation in a supervised learning manner has achieved significant progress in recent years. However, its performance usually drops dramatically due to the data-distribution discrepancy between seen and unseen domains when we directly deploy the trained model to segment the images of unseen (or new coming) domains. To this end, we propose a novel domain generalization framework for the generalizable semantic segmentation task, which enhances the generalization ability of the model from two different views, including the training paradigm and the test strategy. Concretely, we exploit the model-agnostic learning to simulate the domain shift problem, which deals with the domain generalization from the training scheme perspective. Besides, considering the data-distribution discrepancy between seen source and unseen target domains, we develop the target-specific normalization scheme to enhance the generalization ability. Furthermore, when images come one by one in the test stage, we design the image-based memory bank (Image Bank in short) with style-based selection policy to select similar images to obtain more accurate statistics of normalization. Extensive experiments highlight that the proposed method produces state-of-the-art performance for the domain generalization of semantic segmentation on multiple benchmark segmentation datasets, i.e., Cityscapes, Mapillary.

cs.CV↗

arXiv2021

Crosslink-Net: Double-branch Encoder Segmentation Network via Fusing Vertical and Horizontal Convolutions

Accurate image segmentation plays a crucial role in medical image analysis, yet it faces great challenges of various shapes, diverse sizes, and blurry boundaries. To address these difficulties, square kernel-based encoder-decoder architecture has been proposed and widely used, but its performance remains still unsatisfactory. To further cope with these challenges, we present a novel double-branch encoder architecture. Our architecture is inspired by two observations: 1) Since the discrimination of features learned via square convolutional kernels needs to be further improved, we propose to utilize non-square vertical and horizontal convolutional kernels in the double-branch encoder, so features learned by the two branches can be expected to complement each other. 2) Considering that spatial attention can help models to better focus on the target region in a large-sized image, we develop an attention loss to further emphasize the segmentation on small-sized targets. Together, the above two schemes give rise to a novel double-branch encoder segmentation framework for medical image segmentation, namely Crosslink-Net. The experiments validate the effectiveness of our model on four datasets. The code is released at https://github.com/Qianyu1226/Crosslink-Net.

eess.IV↗

arXiv2021

Adversarial Camera Alignment Network for Unsupervised Cross-camera Person Re-identification

In person re-identification (Re-ID), supervised methods usually need a large amount of expensive label information, while unsupervised ones are still unable to deliver satisfactory identification performance. In this paper, we introduce a novel person Re-ID task called unsupervised cross-camera person Re-ID, which only needs the within-camera (intra-camera) label information but not cross-camera (inter-camera) labels which are more expensive to obtain. In real-world applications, the intra-camera label information can be easily captured by tracking algorithms or few manual annotations. In this situation, the main challenge becomes the distribution discrepancy across different camera views, caused by the various body pose, occlusion, image resolution, illumination conditions, and background noises in different cameras. To address this situation, we propose a novel Adversarial Camera Alignment Network (ACAN) for unsupervised cross-camera person Re-ID. It consists of the camera-alignment task and the supervised within-camera learning task. To achieve the camera alignment, we develop a Multi-Camera Adversarial Learning (MCAL) to map images of different cameras into a shared subspace. Particularly, we investigate two different schemes, including the existing GRL (i.e., gradient reversal layer) scheme and the proposed scheme called "other camera equiprobability" (OCE), to conduct the multi-camera adversarial task. Based on this shared subspace, we then leverage the within-camera labels to train the network. Extensive experiments on five large-scale datasets demonstrate the superiority of ACAN over multiple state-of-the-art unsupervised methods that take advantage of labeled source domains and generated images by GAN-based models. In particular, we verify that the proposed multi-camera adversarial task does contribute to the significant improvement.

cs.CV↗

arXiv2021

A novel multiple instance learning framework for COVID-19 severity assessment via data augmentation and self-supervised learning

How to fast and accurately assess the severity level of COVID-19 is an essential problem, when millions of people are suffering from the pandemic around the world. Currently, the chest CT is regarded as a popular and informative imaging tool for COVID-19 diagnosis. However, we observe that there are two issues -- weak annotation and insufficient data that may obstruct automatic COVID-19 severity assessment with CT images. To address these challenges, we propose a novel three-component method, i.e., 1) a deep multiple instance learning component with instance-level attention to jointly classify the bag and also weigh the instances, 2) a bag-level data augmentation component to generate virtual bags by reorganizing high confidential instances, and 3) a self-supervised pretext component to aid the learning process. We have systematically evaluated our method on the CT images of 229 COVID-19 cases, including 50 severe and 179 non-severe cases. Our method could obtain an average accuracy of 95.8%, with 93.6% sensitivity and 96.4% specificity, which outperformed previous works.

eess.IV↗

arXiv2021

Deep Symmetric Adaptation Network for Cross-modality Medical Image Segmentation

Unsupervised domain adaptation (UDA) methods have shown their promising performance in the cross-modality medical image segmentation tasks. These typical methods usually utilize a translation network to transform images from the source domain to target domain or train the pixel-level classifier merely using translated source images and original target images. However, when there exists a large domain shift between source and target domains, we argue that this asymmetric structure could not fully eliminate the domain gap. In this paper, we present a novel deep symmetric architecture of UDA for medical image segmentation, which consists of a segmentation sub-network, and two symmetric source and target domain translation sub-networks. To be specific, based on two translation sub-networks, we introduce a bidirectional alignment scheme via a shared encoder and private decoders to simultaneously align features 1) from source to target domain and 2) from target to source domain, which helps effectively mitigate the discrepancy between domains. Furthermore, for the segmentation sub-network, we train a pixel-level classifier using not only original target images and translated source images, but also original source images and translated target images, which helps sufficiently leverage the semantic information from the images with different styles. Extensive experiments demonstrate that our method has remarkable advantages compared to the state-of-the-art methods in both cross-modality Cardiac and BraTS segmentation tasks.

eess.IV↗

arXiv2020

Diversity Helps: Unsupervised Few-shot Learning via Distribution Shift-based Data Augmentation

Few-shot learning aims to learn a new concept when only a few training examples are available, which has been extensively explored in recent years. However, most of the current works heavily rely on a large-scale labeled auxiliary set to train their models in an episodic-training paradigm. Such a kind of supervised setting basically limits the widespread use of few-shot learning algorithms. Instead, in this paper, we develop a novel framework called Unsupervised Few-shot Learning via Distribution Shift-based Data Augmentation (ULDA), which pays attention to the distribution diversity inside each constructed pretext few-shot task when using data augmentation. Importantly, we highlight the value and importance of the distribution diversity in the augmentation-based pretext few-shot tasks, which can effectively alleviate the overfitting problem and make the few-shot model learn more robust feature representations. In ULDA, we systemically investigate the effects of different augmentation techniques and propose to strengthen the distribution diversity (or difference) between the query set and support set in each few-shot task, by augmenting these two sets diversely (i.e., distribution shifting). In this way, even incorporated with simple augmentation techniques (e.g., random crop, color jittering, or rotation), our ULDA can produce a significant improvement. In the experiments, few-shot models learned by ULDA can achieve superior generalization performance and obtain state-of-the-art results in a variety of established few-shot learning tasks on Omniglot and miniImageNet. The source code is available in https://github.com/WonderSeven/ULDA.

cs.CV↗

arXiv2020

GreyReID: A Two-stream Deep Framework with RGB-grey Information for Person Re-identification

In this paper, we observe that most false positive images (i.e., different identities with query images) in the top ranking list usually have the similar color information with the query image in person re-identification (Re-ID). Meanwhile, when we use the greyscale images generated from RGB images to conduct the person Re-ID task, some hard query images can obtain better performance compared with using RGB images. Therefore, RGB and greyscale images seem to be complementary to each other for person Re-ID. In this paper, we aim to utilize both RGB and greyscale images to improve the person Re-ID performance. To this end, we propose a novel two-stream deep neural network with RGB-grey information, which can effectively fuse RGB and greyscale feature representations to enhance the generalization ability of Re-ID. Firstly, we convert RGB images to greyscale images in each training batch. Based on these RGB and greyscale images, we train the RGB and greyscale branches, respectively. Secondly, to build up connections between RGB and greyscale branches, we merge the RGB and greyscale branches into a new joint branch. Finally, we concatenate the features of all three branches as the final feature representation for Re-ID. Moreover, in the training process, we adopt the joint learning scheme to simultaneously train each branch by the independent loss function, which can enhance the generalization ability of each branch. Besides, a global loss function is utilized to further fine-tune the final concatenated feature. The extensive experiments on multiple benchmark datasets fully show that the proposed method can outperform the state-of-the-art person Re-ID methods. Furthermore, using greyscale images can indeed improve the person Re-ID performance.

cs.CV↗

arXiv2020

Learning-based Computer-aided Prescription Model for Parkinson's Disease: A Data-driven Perspective

In this paper, we study a novel problem: "automatic prescription recommendation for PD patients." To realize this goal, we first build a dataset by collecting 1) symptoms of PD patients, and 2) their prescription drug provided by neurologists. Then, we build a novel computer-aided prescription model by learning the relation between observed symptoms and prescription drug. Finally, for the new coming patients, we could recommend (predict) suitable prescription drug on their observed symptoms by our prescription model. From the methodology part, our proposed model, namely Prescription viA Learning lAtent Symptoms (PALAS), could recommend prescription using the multi-modality representation of the data. In PALAS, a latent symptom space is learned to better model the relationship between symptoms and prescription drug, as there is a large semantic gap between them. Moreover, we present an efficient alternating optimization method for PALAS. We evaluated our method using the data collected from 136 PD patients at Nanjing Brain Hospital, which can be regarded as a large dataset in PD research community. The experimental results demonstrate the effectiveness and clinical potential of our method in this recommendation task, if compared with other competing methods.

cs.LG↗

arXiv2020

Class Distribution Alignment for Adversarial Domain Adaptation

Most existing unsupervised domain adaptation methods mainly focused on aligning the marginal distributions of samples between the source and target domains. This setting does not sufficiently consider the class distribution information between the two domains, which could adversely affect the reduction of domain gap. To address this issue, we propose a novel approach called Conditional ADversarial Image Translation (CADIT) to explicitly align the class distributions given samples between the two domains. It integrates a discriminative structure-preserving loss and a joint adversarial generation loss. The former effectively prevents undesired label-flipping during the whole process of image translation, while the latter maintains the joint distribution alignment of images and labels. Furthermore, our approach enforces the classification consistence of target domain images before and after adaptation to aid the classifier training in both domains. Extensive experiments were conducted on multiple benchmark datasets including Digits, Faces, Scenes and Office31, showing that our approach achieved superior classification in the target domain when compared to the state-of-the-art methods. Also, both qualitative and quantitative results well supported our motivation that aligning the class distributions can indeed improve domain adaptation.

cs.CV↗

arXiv2020

Review of Artificial Intelligence Techniques in Imaging Data Acquisition, Segmentation and Diagnosis for COVID-19

(This paper was submitted as an invited paper to IEEE Reviews in Biomedical Engineering on April 6, 2020.) The pandemic of coronavirus disease 2019 (COVID-19) is spreading all over the world. Medical imaging such as X-ray and computed tomography (CT) plays an essential role in the global fight against COVID-19, whereas the recently emerging artificial intelligence (AI) technologies further strengthen the power of the imaging tools and help medical specialists. We hereby review the rapid responses in the community of medical imaging (empowered by AI) toward COVID-19. For example, AI-empowered image acquisition can significantly help automate the scanning procedure and also reshape the workflow with minimal contact to patients, providing the best protection to the imaging technicians. Also, AI can improve work efficiency by accurate delination of infections in X-ray and CT images, facilitating subsequent quantification. Moreover, the computer-aided platforms help radiologists make clinical decisions, i.e., for disease diagnosis, tracking, and prognosis. In this review paper, we thus cover the entire pipeline of medical imaging and analysis techniques involved with COVID-19, including image acquisition, segmentation, diagnosis, and follow-up. We particularly focus on the integration of AI with X-ray and CT, both of which are widely used in the frontline hospitals, in order to depict the latest progress of medical imaging and radiology fighting against COVID-19.

eess.IV↗