arXiv subjects

Yinghui Xu

Publications and source records attributed to Yinghui Xu.

At least 19 recordsLinked to original sources

arXiv2026

Unfolding the Interdisciplinary Complexities of Climate Science: Fuxi-Climate Foundational Model

Climate research and decision-making require integrating evidence across physical processes, socio-economic dynamics and policy responses. Large language models (LLMs) have been explored for accessing and synthesizing climate knowledge, but their ability to support structured interdisciplinary reasoning is still limited. Here we present the Fuxi-Climate Foundation Model (CFM), a climate-specialized LLM designed to support consistent reasoning across domains. CFM maintains more stable analytical behavior as interdisciplinary complexity increases, whereas performance in other models becomes more variable. On expert-designed climate transition tasks, CFM produces more structured analyses that explicitly address trade-offs and uncertainty, achieving 45% trade-off coverage and 47.27% uncertainty-aware reasoning. These results indicate that CFM can support more realistic analysis of climate risks and transition pathways, and provide a basis for agent-based systems to explore complex policy and decision scenarios. The model is openly available at https://huggingface.co/SII-yuning/cfm.

cs.CY↗

arXiv2026

Infinity-Parser2 Technical Report

We present Infinity-Parser2, a large multimodal model that couples a controllable data-synthesis pipeline with multi-task reinforcement learning for end-to-end document parsing, addressing the persistent scarcity of faithfully annotated parsing corpora. Our contributions are threefold. First, we build a scalable synthesis engine, pairing a controllable rendering framework with an iterative refinement loop, and use it to construct and open-source Infinity-Doc2-5M: a 5-million-sample bilingual (Chinese/English) corpus spanning diverse document types, annotated with element bounding boxes, canonical content forms (Markdown, HTML, LaTeX, SMILES, structured charts), and full-page reading order. Second, we introduce a verifiable, multi-task reward system that enables Joint Reinforcement Learning across eight co-trained objectives (document parsing, layout analysis, table parsing, math formula parsing, chart parsing, chemical formula parsing, document VQA, and general multimodal understanding), unifying perception, structure, and reasoning in a single optimization signal. Third, we release two variants under a shared architecture: Infinity-Parser2-Flash, optimized for low-latency inference with a 3.68x throughput gain over Infinity-Parser-7B, and Infinity-Parser2-Pro, engineered for precision-critical settings. Infinity-Parser2-Pro reaches state-of-the-art 87.6% on olmOCR-Bench and 74.3% on ParseBench, surpassing DeepSeek-OCR-2, PaddleOCR-VL-1.5, and MinerU2.5, with strong generalization to charts, chemical formulas, and document VQA.

cs.AI↗

arXiv2026

VentAgent: When LLMs Learn to Breathe -- Multi-Objective Arbitration for ARDS Ventilation

Mechanical ventilation for Acute Respiratory Distress Syndrome (ARDS) requires balancing competing physiological goals, including oxygenation, lung protection, and acid-base homeostasis. However, current data-driven methods, especially those imitating retrospective Electronic Health Records (EHR), often suffer from imitation bias. They may capture superficial correlations from inconsistent clinical demonstrations, such as associating passive ventilator settings with survival because such settings are common in stable patients, and thus fail to generalize to volatile or out-of-distribution phenotypes. Standard Reinforcement Learning (RL) methods also struggle with the adversarial trade-offs of critical care and often produce opaque policies with limited clinical interpretability. To address these limitations, we introduce VentAgent, a hierarchical framework in which Large Language Models (LLMs) act as transparent arbitrators for mechanical ventilation. We reformulate ventilation control as a dynamic Multi-Objective Arbitration process rather than single-objective optimization. VentAgent decomposes decision-making into three interpretable stages: Perception, Planning, and Orchestration. By leveraging the semantic reasoning capabilities of LLMs, it synthesizes strategies from heterogeneous experts and resolves conflicting clinical priorities through an explicit coordination mechanism. Evaluations on a high-fidelity physiological simulator show that VentAgent outperforms state-of-the-art RL and classical control baselines. Moreover, it converts control decisions into human-readable reasoning chains, offering a safer, more interpretable, and adaptable paradigm for critical care automation.

cs.LG↗

arXiv2026

LineageFlow: Flow Matching for High-Fidelity Family-Aware Protein Sequence Generation

Protein sequence generation for engineering requires samples that are biophysically plausible and, when targeting a family/domain, remain recognizable members while exploring within-family diversity. Current discrete generative models typically start from uniform or masked-token noise, which discards strong position-specific constraints induced by evolution and forces the model to reconstruct conserved residues from scratch, leading to weak family control and low plausibility. We propose \emph{LineageFlow}, a Dirichlet flow-matching model that initializes generation from lineage priors derived from ancestral sequence reconstruction, turning generation into structured mutation from an evolved scaffold. Across diverse protein families, LineageFlow achieves family validity close to held-out natural sequences and improves predicted structural confidence over uniform-/mask-initialized baselines while maintaining substantial novelty and diversity. Finally, we introduce \emph{rerouting}, a single intermediate-time mutate--select--amplify intervention that enables objective-guided sampling without per-step predictor guidance and yields further gains in plausibility, including a zero-shot enzyme generation case study. Code is available at https://github.com/Jinx-byebye/LineageFlow.

cs.CE↗

arXiv2026

The Cancellation Hypothesis in Critic-Free RL: From Outcome Rewards to Token Credits

A commonly accepted explanation of critic-free RL for LLMs, based on sequence-level rewards, is that it reinforces successful rollouts with a positive advantage while penalizing failed ones. In contrast, we study critic-free RL from a token-level perspective, revealing the token-flipping phenomenon: positive and negative rollouts exhibit remarkably similar proportions of tokens whose probabilities are boosted or suppressed during RL training. To explain this phenomenon, we further show that a token's change in probability is not fully determined by its own advantage; coupled gradient interactions with other tokens also play a non-negligible role. Specifically, these token coupling effects occur primarily between identical tokens that are both predicted with low confidence. Building upon this analysis, we propose the cancellation hypothesis: as a result of coupling, opposing signals cancel out for tokens shared by positive and negative rollouts, while tokens more specific to successful rollouts receive stronger reinforcement, thereby inducing hidden token-level credit assignment from rollout-level rewards. We support this hypothesis with complementary empirical evidence. (1) Compared with training on only positive rollouts, critic-free RL shifts updates from template and formatting tokens toward reasoning tokens; (2) Tokens boosted by critic-free RL consistently demonstrate higher value than suppressed tokens, regardless of whether they originate from positive or negative rollouts. Guided by this view, we implement two batching interventions to encourage or preserve cancellation in critic-free RL training: query-preserved mini-batching and reward-balanced batching. Despite their simplicity, these interventions improve RLVR training across multiple model scales, supporting cancellation as both an explanatory principle and a practical design criterion for critic-free RL training.

cs.LG↗

arXiv2026

InterveneBench: Benchmarking LLMs for Intervention Reasoning and Causal Study Design in Real Social Systems

Causal inference in social science relies on end-to-end, intervention-centered research-design reasoning grounded in real-world policy interventions, but current benchmarks fail to evaluate this capability of large language models (LLMs). We present InterveneBench, a benchmark designed to assess such reasoning in realistic social settings. Each instance in InterveneBench is derived from an empirical social science study and requires models to reason about policy interventions and identification assumptions without access to predefined causal graphs or structural equations. InterveneBench comprises 744 peer-reviewed studies across diverse policy domains. Experimental results show that state-of-the-art LLMs struggle under this setting. To address this limitation, we further propose a multi-agent framework, STRIDES. It achieves significant performance improvements over state-of-the-art reasoning models. Our code and data are available at https://github.com/Sii-yuning/STRIDES.

cs.CY↗

arXiv2025

ORIGAMISPACE: Benchmarking Multimodal LLMs in Multi-Step Spatial Reasoning with Mathematical Constraints

Spatial reasoning is a key capability in the field of artificial intelligence, especially crucial in areas such as robotics, computer vision, and natural language understanding. However, evaluating the ability of multimodal large language models(MLLMs) in complex spatial reasoning still faces challenges, particularly in scenarios requiring multi-step reasoning and precise mathematical constraints. This paper introduces ORIGAMISPACE, a new dataset and benchmark designed to evaluate the multi-step spatial reasoning ability and the capacity to handle mathematical constraints of MLLMs through origami tasks. The dataset contains 350 data instances,each comprising a strictly formatted crease pattern (CP diagram), the Compiled Flat Pattern, the complete Folding Process, and the final Folded Shape Image. We propose four evaluation tasks: Pattern Prediction, Multi-step Spatial Reasoning, Spatial Relationship Prediction, and End-to-End CP Code Generation. For the CP code generation task, we design an interactive environment and explore the possibility of using reinforcement learning methods to train MLLMs. Through experiments on existing MLLMs, we initially reveal the strengths and weaknesses of these models in handling complex spatial reasoning tasks.

cs.AI↗

arXiv2025

Reflective Personalization Optimization: A Post-hoc Rewriting Framework for Black-Box Large Language Models

The personalization of black-box large language models (LLMs) is a critical yet challenging task. Existing approaches predominantly rely on context injection, where user history is embedded into the prompt to directly guide the generation process. However, this single-step paradigm imposes a dual burden on the model: generating accurate content while simultaneously aligning with user-specific styles. This often results in a trade-off that compromises output quality and limits precise control. To address this fundamental tension, we propose Reflective Personalization Optimization (RPO), a novel framework that redefines the personalization paradigm by decoupling content generation from alignment. RPO operates in two distinct stages: first, a base model generates a high-quality, generic response; then, an external reflection module explicitly rewrites this output to align with the user's preferences. This reflection module is trained using a two-stage process. Initially, supervised fine-tuning is employed on structured rewriting trajectories to establish a core personalized reasoning policy that models the transformation from generic to user-aligned responses. Subsequently, reinforcement learning is applied to further refine and enhance the quality of the personalized outputs. Comprehensive experiments on the LaMP benchmark demonstrate that RPO, by decoupling content generation from personalization, significantly outperforms state-of-the-art baselines. These findings underscore the superiority of explicit response shaping over implicit context injection. Moreover, RPO introduces an efficient, model-agnostic personalization layer that can be seamlessly integrated with any underlying base model, paving the way for a new and effective direction in user-centric generation scenarios.

cs.CL↗

arXiv2025

Blending Supervised and Reinforcement Fine-Tuning with Prefix Sampling

Existing LLMs-post-training techniques are broadly categorized into supervised fine-tuning (SFT) and reinforcement fine-tuning (RFT). Each paradigm presents a distinct trade-off: (1) SFT excels at mimicking demonstration data, but can lead to problematic generalization as a form of behavior cloning. (2) Conversely, RFT can significantly enhance a model's performance but is prone to learning unexpected behaviors, and its performance is sensitive to the initial policy. In this paper, we propose a unified view of these methods and introduce Prefix-RFT, a hybrid approach that synergizes learning from both demonstration and exploration. Using mathematical reasoning problems as a test bed, we empirically demonstrate that Prefix-RFT is simple yet effective. Not only does it surpass the performance of standalone SFT and RFT, but it also outperforms parallel mixed-policy RFT methods. Our analysis highlights the complementary nature of SFT and RFT, validating that Prefix-RFT effectively harmonizes them. Further ablation studies confirm the method's robustness to variations in the quality and quantity of demonstration data.

cs.LG↗

arXiv2025

SlimRAG: Retrieval without Graphs via Entity-Aware Context Selection

Retrieval-Augmented Generation (RAG) enhances language models by incorporating external knowledge at inference time. However, graph-based RAG systems often suffer from structural overhead and imprecise retrieval: they require costly pipelines for entity linking and relation extraction, yet frequently return subgraphs filled with loosely related or tangential content. This stems from a fundamental flaw -- semantic similarity does not imply semantic relevance. We introduce SlimRAG, a lightweight framework for retrieval without graphs. SlimRAG replaces structure-heavy components with a simple yet effective entity-aware mechanism. At indexing time, it constructs a compact entity-to-chunk table based on semantic embeddings. At query time, it identifies salient entities, retrieves and scores associated chunks, and assembles a concise, contextually relevant input -- without graph traversal or edge construction. To quantify retrieval efficiency, we propose Relative Index Token Utilization (RITU), a metric measuring the compactness of retrieved content. Experiments across multiple QA benchmarks show that SlimRAG outperforms strong flat and graph-based baselines in accuracy while reducing index size and RITU (e.g., 16.31 vs. 56+), highlighting the value of structure-free, entity-centric context selection. The code will be released soon. https://github.com/continue-ai-company/SlimRAG

cs.IR↗

arXiv2025

AI2Agent: An End-to-End Framework for Deploying AI Projects as Autonomous Agents

As AI technology advances, it is driving innovation across industries, increasing the demand for scalable AI project deployment. However, deployment remains a critical challenge due to complex environment configurations, dependency conflicts, cross-platform adaptation, and debugging difficulties, which hinder automation and adoption. This paper introduces AI2Agent, an end-to-end framework that automates AI project deployment through guideline-driven execution, self-adaptive debugging, and case \& solution accumulation. AI2Agent dynamically analyzes deployment challenges, learns from past cases, and iteratively refines its approach, significantly reducing human intervention. To evaluate its effectiveness, we conducted experiments on 30 AI deployment cases, covering TTS, text-to-image generation, image editing, and other AI applications. Results show that AI2Agent significantly reduces deployment time and improves success rates. The code and demo video are now publicly accessible.

cs.AI↗

arXiv2025

KernelDNA: Dynamic Kernel Sharing via Decoupled Naive Adapters

Dynamic convolution enhances model capacity by adaptively combining multiple kernels, yet faces critical trade-offs: prior works either (1) incur significant parameter overhead by scaling kernel numbers linearly, (2) compromise inference speed through complex kernel interactions, or (3) struggle to jointly optimize dynamic attention and static kernels. We observe that pre-trained Convolutional Neural Networks (CNNs) exhibit inter-layer redundancy akin to that in Large Language Models (LLMs). Specifically, dense convolutional layers can be efficiently replaced by derived "child" layers generated from a shared "parent" convolutional kernel through an adapter. To address these limitations and implement the weight-sharing mechanism, we propose a lightweight convolution kernel plug-in, named KernelDNA. It decouples kernel adaptation into input-dependent dynamic routing and pre-trained static modulation, ensuring both parameter efficiency and hardware-friendly inference. Unlike existing dynamic convolutions that expand parameters via multi-kernel ensembles, our method leverages cross-layer weight sharing and adapter-based modulation, enabling dynamic kernel specialization without altering the standard convolution structure. This design preserves the native computational efficiency of standard convolutions while enhancing representation power through input-adaptive kernel adjustments. Experiments on image classification and dense prediction tasks demonstrate that KernelDNA achieves a state-of-the-art accuracy-efficiency balance among dynamic convolution variants.

cs.CV↗

arXiv2025

Guess What I am Thinking: A Benchmark for Inner Thought Reasoning of Role-Playing Language Agents

Recent advances in LLM-based role-playing language agents (RPLAs) have attracted broad attention in various applications. While chain-of-thought reasoning has shown importance in many tasks for LLMs, the internal thinking processes of RPLAs remain unexplored. Understanding characters' inner thoughts is crucial for developing advanced RPLAs. In this paper, we introduce ROLETHINK, a novel benchmark constructed from literature for evaluating character thought generation. We propose the task of inner thought reasoning, which includes two sets: the gold set that compares generated thoughts with original character monologues, and the silver set that uses expert synthesized character analyses as references. To address this challenge, we propose MIRROR, a chain-of-thought approach that generates character thoughts by retrieving memories, predicting character reactions, and synthesizing motivations. Through extensive experiments, we demonstrate the importance of inner thought reasoning for RPLAs, and MIRROR consistently outperforms existing methods. Resources are available at https://github.com/airaer1998/RPA_Thought.

cs.AI↗

arXiv2025

AURORA:Automated Training Framework of Universal Process Reward Models via Ensemble Prompting and Reverse Verification

The reasoning capabilities of advanced large language models (LLMs) like o1 have revolutionized artificial intelligence applications. Nevertheless, evaluating and optimizing complex reasoning processes remain significant challenges due to diverse policy distributions and the inherent limitations of human effort and accuracy. In this paper, we present AURORA, a novel automated framework for training universal process reward models (PRMs) using ensemble prompting and reverse verification. The framework employs a two-phase approach: First, it uses diverse prompting strategies and ensemble methods to perform automated annotation and evaluation of processes, ensuring robust assessments for reward learning. Second, it leverages practical reference answers for reverse verification, enhancing the model's ability to validate outputs and improving training accuracy. To assess the framework's performance, we extend beyond the existing ProcessBench benchmark by introducing UniversalBench, which evaluates reward predictions across full trajectories under diverse policy distribtion with long Chain-of-Thought (CoT) outputs. Experimental results demonstrate that AURORA enhances process evaluation accuracy, improves PRMs' accuracy for diverse policy distributions and long-CoT responses. The project will be open-sourced at https://auroraprm.github.io/. The Universal-PRM-7B is available at https://huggingface.co/infly/Universal-PRM-7B.

cs.CL↗

arXiv2025

SCP-116K: A High-Quality Problem-Solution Dataset and a Generalized Pipeline for Automated Extraction in the Higher Education Science Domain

Recent breakthroughs in large language models (LLMs) exemplified by the impressive mathematical and scientific reasoning capabilities of the o1 model have spotlighted the critical importance of high-quality training data in advancing LLM performance across STEM disciplines. While the mathematics community has benefited from a growing body of curated datasets, the scientific domain at the higher education level has long suffered from a scarcity of comparable resources. To address this gap, we present SCP-116K, a new large-scale dataset of 116,756 high-quality problem-solution pairs, automatically extracted from heterogeneous sources using a streamlined and highly generalizable pipeline. Our approach involves stringent filtering to ensure the scientific rigor and educational level of the extracted materials, while maintaining adaptability for future expansions or domain transfers. By openly releasing both the dataset and the extraction pipeline, we seek to foster research on scientific reasoning, enable comprehensive performance evaluations of new LLMs, and lower the barrier to replicating the successes of advanced models like o1 in the broader science community. We believe SCP-116K will serve as a critical resource, catalyzing progress in high-level scientific reasoning tasks and promoting further innovations in LLM development. The dataset and code are publicly available at https://github.com/AQA6666/SCP-116K-open.

cs.CL↗

arXiv2024

An Attentive Dual-Encoder Framework Leveraging Multimodal Visual and Semantic Information for Automatic OSAHS Diagnosis

Obstructive sleep apnea-hypopnea syndrome (OSAHS) is a common sleep disorder caused by upper airway blockage, leading to oxygen deprivation and disrupted sleep. Traditional diagnosis using polysomnography (PSG) is expensive, time-consuming, and uncomfortable. Existing deep learning methods using facial image analysis lack accuracy due to poor facial feature capture and limited sample sizes. To address this, we propose a multimodal dual encoder model that integrates visual and language inputs for automated OSAHS diagnosis. The model balances data using randomOverSampler, extracts key facial features with attention grids, and converts physiological data into meaningful text. Cross-attention combines image and text data for better feature extraction, and ordered regression loss ensures stable learning. Our approach improves diagnostic efficiency and accuracy, achieving 91.3% top-1 accuracy in a four-class severity classification task, demonstrating state-of-the-art performance. Code will be released upon acceptance.

cs.CV↗

arXiv2024

OpenCoder: The Open Cookbook for Top-Tier Code Large Language Models

Large language models (LLMs) for code have become indispensable in various domains, including code generation, reasoning tasks and agent systems. While open-access code LLMs are increasingly approaching the performance levels of proprietary models, high-quality code LLMs suitable for rigorous scientific investigation, particularly those with reproducible data processing pipelines and transparent training protocols, remain limited. The scarcity is due to various challenges, including resource constraints, ethical considerations, and the competitive advantages of keeping models advanced. To address the gap, we introduce OpenCoder, a top-tier code LLM that not only achieves performance comparable to leading models but also serves as an "open cookbook" for the research community. Unlike most prior efforts, we release not only model weights and inference code, but also the reproducible training data, complete data processing pipeline, rigorous experimental ablation results, and detailed training protocols for open scientific research. Through this comprehensive release, we identify the key ingredients for building a top-tier code LLM: (1) code optimized heuristic rules for data cleaning and methods for data deduplication, (2) recall of text corpus related to code and (3) high-quality synthetic data in both annealing and supervised fine-tuning stages. By offering this level of openness, we aim to broaden access to all aspects of a top-tier code LLM, with OpenCoder serving as both a powerful model and an open foundation to accelerate research, and enable reproducible advancements in code AI.

cs.CL↗

arXiv2024

An Open Quantum Chemistry Property Database of 120 Kilo Molecules with 20 Million Conformers

Artificial intelligence is revolutionizing computational chemistry, bringing unprecedented innovation and efficiency to the field. To further advance research and expedite progress, we introduce the Quantum Open Organic Molecular (QO2Mol) database -- a large-scale quantum chemistry dataset designed for professional and transformative research in organic molecular sciences under an open-source license. The database comprises 120,000 organic molecules and approximately 20 million conformers, encompassing 10 different elements (C, H, O, N, S, P, F, Cl, Br, I), with heavy atom counts exceeding 40. Utilizing the high-precision B3LYP/def2-SVP quantum mechanical level, each conformation was meticulously computed for quantum mechanical properties, including potential energy and forces. These molecules are derived from fragments of compounds in ChEMBL, ensuring their structural relevance to real-world compounds. Its extensive coverage of molecular structures and diverse elemental composition enables comprehensive studies of structure-property relationships, enhancing the accuracy and applicability of machine learning models in predicting molecular behaviors. The QO2Mol database and benchmark codes are available at https://github.com/saiscn/QO2Mol/ .

physics.chem-ph↗