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Yiyao Chen

Publications and source records attributed to Yiyao Chen.

9 recordsLinked to original sources

CyberNeuro: A Privacy-Preserving Agentic Workbench for Cohort-Scale Neuroimage and Clinical Data Analysis

Despite tremendous success in neuroimaging methodology, making large-scale, high-dimensional datasets ready for AI/ML applications remains a critical operational bottleneck. Conventional workflows require extensive manual effort across metadata curation, pipeline execution, post-processing quality control, and data management, a burden that disproportionately excludes laboratories with limited manpower and computational infrastructure. To address this real-world barrier, there is an urgent need for scalable, cost-effective computational platforms that democratize advanced neuroimaging analytics and accelerate discoveries in mental health and clinical translation. Capitalizing on multi-agent LLM breakthroughs, we introduce CyberNeuro, an agentic workbench with a tailored local LLM-model ('WandaMind') for automated neuroimaging and health-data analysis. Driven by four dedicated agents (Planner, Validator, Dispatcher, and Reporter) communicating via a secure MCP bridge and a pinned execution layer, CyberNeuro enables researchers to execute complex workflows using natural language while maintaining clinical-grade data privacy. On the public NeuroBench suite, CyberNeuro increases held-out domain accuracy from 40% to 69% over the baseline model. Beyond automated metrics, the platform integrates a human-in-the-loop verification panel to ensure rigorous biomedical quality control. Across the same end-to-end 10-batch cohort workflow suite, the local WandaMind configuration completed all tasks with an estimated aggregate token count of about 10.6% using WandaMind and 61.7% using cloud providers of token usage, compared to Neuroclaw, respectively. The platform and its production-ready modules are available at https://wanda-cyberbench.com.

cs.MA

NeuroPilot: An Agent-Driven Smart Pipeline for Processing, Quality Control, and Managing Neuroimages

Transforming raw neuroimage archives into analysis-ready derivatives relies on three brittle stages: data standardization, modality-specific preprocessing, and quality control (QC). While individual neuroimaging tools are well developed, their orchestration requires project-specific scripts, environment-adaptive tuning, and labor-intensive manual QC. To address this, we introduce NeuroPilot, a multi-agent system that digitalizes the expertise of neuroimage processing, QC, and data management into three LLM-invocable skills: dcm2bids-skill, neuroimage-pre-skill, and qc-agent-skill. The LLM-driven agent autonomously orchestrates workflows, generalizing various infrastructure settings into a single configuration to achieve the highest scalability. Demonstrating the system's generalizability, we deployed NeuroPilot across 17 cohorts (>123,000 subjects) spanning infant to aging populations and multiple MRI modalities (structural, diffusion, functional). In practice, after standardizing data via the dcm2bids-skill, the agent dynamically routes datasets to the optimal neuroimage-pre-skill based on available modalities and cohort traits (e.g., dispatching T1w and fMRI data to fMRIPrep, or selecting specialized pipelines for infant cohorts). The qc-agent-skill then drives an evidence-based, semi-automated QC via a 3-D browser dashboard, utilizing a multi-tiered verification system to optimize failed cases and escalate complex issues for supervisor inspection. Quantitatively, our QC agent screened 558 production subjects, validating its automated flags against FreeSurfer's topology-defect metrics. The infant processing pipeline achieved a 100% (201/201) completion rate on QC-validated inputs. Importantly, NeuroPilot compresses the traditional 2--3 month timeline for training staff and processing complete datasets into a single week. NeuroPilot is deployed in https://wanda-cyberbench.com/.

cs.CV

Persistent dynamic magnetic state in artificial honeycomb spin ice

Topological magnetic charges, arising due to the non-vanishing magnetic flux on spin ice vertices, serve as the origin of magnetic monopoles that traverse the underlying lattice effortlessly. Unlike spin ice materials of atomic origin, the dynamic state in artificial honeycomb spin ice is conventionally described in terms of finite size domain wall kinetics that require magnetic field or current application. Contrary to this common understanding, here we show that thermally tunable artificial permalloy honeycomb lattice manifests a perpetual dynamic state due to self-propelled magnetic charge defect relaxation in the absence of any external tuning agent. Quantitative investigation of magnetic charge defect dynamics using neutron spin echo spectroscopy reveals sub-ns relaxation times that are comparable to monopole's relaxation in bulk spin ices. Most importantly, the kinetic process remains unabated at low temperature where thermal fluctuation is negligible. This suggests that dynamic phenomena in honeycomb spin ice are mediated by quasi-particle type entities, also confirmed by quantum Monte-Carlo simulations that replicate the kinetic behavior. Our research unveils a new `macroscopic' magnetic particle that shares many known traits of quantum particles, namely magnetic monopole and magnon.

cond-mat.str-el

Mechanism of magnetic diode in artificial honeycomb lattice

Spin diode is important prerequisite to practical manifestation of spin electronics. Yet, a functioning magnetic diode at room temperature is still illusive. Here, we reveal diode-type phenomena due to magnetic charge mediated conduction in artificial honeycomb geometry, made of concave shape single domain permalloy element. We find that honeycomb lattice defies symmetry by populating vertices with low and high multiplicity magnetic charges, causing asymmetric magnetization, in applied current of opposite polarity. High multiplicity units create highly resistive network, thereby inhibiting magnetic charge dynamics propelled electrical conduction. However, practical realization of this effect requires modest demagnetization factor in constituting element. Concave structure fulfills the condition. Subsequently, magnetic diode behavior emerges across broad thermal range of $T$ = 40K - 300K. The finding is a departure from the prevailing notion of spin-charge interaction as the sole guiding principle behind spintronics. Consequently, a new vista, mediated by magnetic charge interaction, is envisaged for spintronic research

cond-mat.mes-hall

Quantum magnetic properties and metal-to-insulator transition in chemically doped calcium ruthenate perovskite

Ruthenates provide comprehensive platform to study a plethora of novel properties, such as quantum magnetism, superconductivity and magnetic fluctuation mediated metal-insulator transition. In this article, we provide an overview of quantum mechanical phenomenology in calcium ruthenium oxide with varying compositions. While the stochiometric composition of CaRuO$_{3}$ exhibits non-Fermi liquid behavior with quasi-criticality, chemically doped compounds depict prominent signatures of quantum magnetic fluctuations at low temperature that in some cases are argued to mediate in metal-insulator transition. In the case of cobalt doped- CaRuO$_{3}$, an unusual continuum fluctuation is found to persist deep inside the glassy phase of the material. These observations reflect the richness of ruthenate research platform in the study of quantum magnetic phenomena of fundamental importance.

cond-mat.str-el

Quantum disordered state of magnetic charges in nanoengineered honeycomb lattice

A quantum magnetic state due to magnetic charges is never observed, even though they are treated as quantum mechanical variable in theoretical calculations. Here, we demonstrate the occurrence of a novel quantum disordered state of magnetic charges in nanoengineered magnetic honeycomb lattice of ultra-small connecting elements. The experimental research, performed using spin resolved neutron scattering, reveals a massively degenerate ground state, comprised of low integer and energetically forbidden high integer magnetic charges, that manifests cooperative paramagnetism at low temperature. The system tends to preserve the degenerate configuration even under large magnetic field application. It exemplifies the robustness of disordered correlation of magnetic charges in 2D honeycomb lattice. The realization of quantum disordered ground state elucidates the dominance of exchange energy, which is enabled due to the nanoscopic magnetic element size in nanoengineered honeycomb. Consequently, an archetypal platform is envisaged to study quantum mechanical phenomena due to emergent magnetic charges.

cond-mat.mes-hall

Magnetic charge's relaxation propelled electricity in two-dimensional magnetic honeycomb lattice

Emerging new concepts, such as magnetic charge dynamics in two-dimensional magnetic material, can provide novel mechanism for spin based electrical transport at macroscopic length. In artificial spin ice of single domain elements, magnetic charge's relaxation can create an efficient electrical pathway for conduction by generating fluctuations in local magnetic field that couple with conduction electrons spins. In a first demonstration, we show that the electrical conductivity is propelled by more than an order of magnitude at room temperature due to magnetic charge defects sub-picosecond relaxation in artificial magnetic honeycomb lattice. The direct evidence to the proposed electrical conduction mechanism in two-dimensional frustrated magnet points to the untapped potential for spintronic applications in this system.

cond-mat.mes-hall

Spin correlation in trigonal EuMn$_{2}$As$_{2}$

The trigonal structure of EuMn$_{2}$As$_{2}$ is an anomaly in the tetragonal 122-type pnictide family. We report detailed investigation of the underlying magnetic correlations in single crystal EuMn$_{2}$As$_{2}$ using high resolution elastic neutron scattering measurements. The system undergoes through two successive antiferromagnetic transitions at $T$ = 135 K and 14.4 K, respectively. Numerical modeling of the experimental data reveals the long range antiferromagnetic correlation of Mn-ions in the $a-b$ plane below $T_N1$ = 135 K. Mn spins are aligned closer to the diagonal axis of the unit cell. The lower temperature transition, below $T_N2$ = 14.4 K, is found to arise due to the long range antiferromagnetic correlation of Eu spins that are rotated by $θ$ = 55 degree from the $c$-axis of the unit cell.

cond-mat.str-el

Quantum continuum fluctuations in glassy perovskite Ca(Co$_{0.15}$Ru$_{0.85}$)O$_{3}$

The quantum spin continuum and classical spin freezing, associated with a glassy state, represent two opposite extremes of a correlated electronic material. Here, we report the coexistence of a quantum spin continuum with a weak spin glass order in Co-doped CaRuO$_{3}$ perovskite near the chemical doping dependent metal-insulator transition boundary. Inelastic neutron measurements on Ca(Co$_{0.15}$Ru$_{0.85}$)O$_{3}$ at low temperature, $T$ = 1.5 K, reveal a continuum spectrum in the $Q-E$ space due to uncorrelated spin fluctuations. This persists across the glass transition at $T_G \simeq$23 K. Furthermore, scaling of the dynamic susceptibility yields a very small scaling coefficient $α$ $\simeq$ 0.1, suggesting extreme locality of the dynamic properties. The experimental results indicate the realization of a narrow regime where the distinction between continuum dynamic behavior and glass-like regimes is reduced.

cond-mat.str-el