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Yiying Wang

Publications and source records attributed to Yiying Wang.

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Multi-Stage NeRF for Efficient 3D Coronary Artery Reconstruction from Two Narrow-Angle Angiographic Projections

X-ray coronary angiography is the clinical gold standard for coronary artery disease during real-time cardiac interventions, but provides only 2D projections of inherently 3D vessels. Existing learning-based 2D-to-3D reconstruction methods typically require wide angular coverage or multiple views, assumptions that are rarely satisfied in routine practice where only two projections with narrow angular separation are available. To address these challenges, we propose NeCA++, a multi-stage self-supervised neural radiance field (NeRF) framework tailored to clinically realistic acquisition constraints. The framework decomposes reconstruction into two stages that progressively refine spatial support and representation capacity. In the first stage, a coarse 3D representation of the vasculature is reconstructed, restricting the subsequent optimisation to regions with a higher likelihood of vessel presence, termed an active region. Afterward reconstruction is restricted to this region while higher-resolution representations are progressively activated to recover fine vascular details. This multi-stage strategy focuses learning on anatomically plausible regions, mitigates gradient dilution under extreme sparsity, and stabilises global topology before recovering fine vascular branches. Furthermore, two vessel-specific regularisations are introduced: a ray-aligned constraint to reduce projection-induced ambiguity, and a bimodal density penalty to enable early vessel-background separation. Extensive experiments across three datasets (ImageCAS, ASOCA, and Synthetic RCA) and four angular configurations demonstrate consistent superiority over state-of-the-art baselines, particularly under clinically realistic narrow-angle settings, while achieving reconstruction within 58 seconds per case.

cs.CG

Multimodal deep learning from spectra for small-molecule structure identification: enhancing robustness with mixed-condition training

In practical molecular characterization, small-molecule structure identification benefits from complementary spectroscopic evidence, but missing, degraded, or mismatched spectra challenge multimodal models. Herein, we incorporate domain knowledge from spectroscopy and chemistry into mixed-condition training for candidate structure reranking, using a reproducible evaluation protocol and mixture-of-experts (MoE) fusion. The protocol incorporates perturbations tailored to each spectroscopic modality and chemically informed spectrum replacements to cover variations in spectral availability, quality, and consistency. A total of 79,462 test samples were evaluated across 30 predefined conditions using simulated spectra from the Multimodal Spectroscopic Dataset (MSSD) for mass spectrometry (MS), infrared (IR) spectroscopy, and 1H and 13C nuclear magnetic resonance (NMR), with up to 128 hard candidate structures per sample. A controlled two-by-two factorial comparison of complete-input training versus mixed-condition training and vanilla concatenation versus MoE fusion, with matched evaluation conditions, showed that mixed-condition training provided the main gains in both architectures. For MoE, mean reciprocal rank (MRR), averaged equally across conditions, increased from 0.9203 to 0.9763, a relative increase of 6.08%. Recall at rank 1 (R@1), averaged over the same conditions, increased from 89.50% to 96.36%, an increase of 6.86 percentage points and a relative increase of 7.67%. IR-only and MS/MS-only MRR increased from 0.4337 to 0.9307 and from 0.3711 to 0.8575, reaching 2.15 and 2.31 times their respective baseline values, while complete-input performance remained high. These results support integrating domain knowledge into training-condition design to improve robustness, with further gains from MoE under mixed-condition training.

cs.LG

Transferable Graph Condensation from the Causal Perspective

The increasing scale of graph datasets has significantly improved the performance of graph representation learning methods, but it has also introduced substantial training challenges. Graph dataset condensation techniques have emerged to compress large datasets into smaller yet information-rich datasets, while maintaining similar test performance. However, these methods strictly require downstream applications to match the original dataset and task, which often fails in cross-task and cross-domain scenarios. To address these challenges, we propose a novel causal-invariance-based and transferable graph dataset condensation method, named TGCC, providing effective and transferable condensed datasets. Specifically, to preserve domain-invariant knowledge, we first extract domain causal-invariant features from the spatial domain of the graph using causal interventions. Then, to fully capture the structural and feature information of the original graph, we perform enhanced condensation operations. Finally, through spectral-domain enhanced contrastive learning, we inject the causal-invariant features into the condensed graph, ensuring that the compressed graph retains the causal information of the original graph. Experimental results on five public datasets and our novel FinReport dataset demonstrate that TGCC achieves up to a 13.41% improvement in cross-task and cross-domain complex scenarios compared to existing methods, and achieves state-of-the-art performance on 5 out of 6 datasets in the single dataset and task scenario.

cs.LG

DeepCA: Deep Learning-based 3D Coronary Artery Tree Reconstruction from Two 2D Non-simultaneous X-ray Angiography Projections

Cardiovascular diseases (CVDs) are the most common cause of death worldwide. Invasive x-ray coronary angiography (ICA) is one of the most important imaging modalities for the diagnosis of CVDs. ICA typically acquires only two 2D projections, which makes the 3D geometry of coronary vessels difficult to interpret, thus requiring 3D coronary artery tree reconstruction from two projections. State-of-the-art approaches require significant manual interactions and cannot correct the non-rigid cardiac and respiratory motions between non-simultaneous projections. In this study, we propose a novel deep learning pipeline named \emph{DeepCA}. We leverage the Wasserstein conditional generative adversarial network with gradient penalty, latent convolutional transformer layers, and a dynamic snake convolutional critic to implicitly compensate for the non-rigid motion and provide 3D coronary artery tree reconstruction. Through simulating projections from coronary computed tomography angiography (CCTA), we achieve the generalisation of 3D coronary tree reconstruction on real non-simultaneous ICA projections. We incorporate an application-specific evaluation metric to validate our proposed model on both a CCTA dataset and a real ICA dataset, together with Chamfer $\ell_2$ distance. The results demonstrate promising performance of our DeepCA model in vessel topology preservation, recovery of missing features, and generalisation ability to real ICA data. To the best of our knowledge, this is the first study that leverages deep learning to achieve 3D coronary tree reconstruction from two real non-simultaneous x-ray angiographic projections.

eess.IV

NeCA: 3D Coronary Artery Tree Reconstruction from Two 2D Projections via Neural Implicit Representation

Cardiovascular diseases (CVDs) are the most common health threats worldwide. 2D X-ray invasive coronary angiography (ICA) remains the most widely adopted imaging modality for CVD assessment during real-time cardiac interventions. However, it is often difficult for cardiologists to interpret the 3D geometry of coronary vessels based on 2D planes. Moreover, due to the radiation limit, often only two angiographic projections are acquired, providing limited information of the vessel geometry and necessitating 3D coronary tree reconstruction based only on two ICA projections. In this paper, we propose a self-supervised deep learning method called NeCA, which is based on neural implicit representation using the multiresolution hash encoder and differentiable cone-beam forward projector layer, in order to achieve 3D coronary artery tree reconstruction from two 2D projections. We validate our method using six different metrics on a dataset generated from coronary computed tomography angiography of right coronary artery and left anterior descending artery. The evaluation results demonstrate that our NeCA method, without requiring 3D ground truth for supervision or large datasets for training, achieves promising performance in both vessel topology and branch-connectivity preservation compared to the supervised deep learning model.

eess.IV

PEER: Expertizing Domain-Specific Tasks with a Multi-Agent Framework and Tuning Methods

In domain-specific applications, GPT-4, augmented with precise prompts or Retrieval-Augmented Generation (RAG), shows notable potential but faces the critical tri-lemma of performance, cost, and data privacy. High performance requires sophisticated processing techniques, yet managing multiple agents within a complex workflow often proves costly and challenging. To address this, we introduce the PEER (Plan, Execute, Express, Review) multi-agent framework. This systematizes domain-specific tasks by integrating precise question decomposition, advanced information retrieval, comprehensive summarization, and rigorous self-assessment. Given the concerns of cost and data privacy, enterprises are shifting from proprietary models like GPT-4 to custom models, striking a balance between cost, security, and performance. We developed industrial practices leveraging online data and user feedback for efficient model tuning. This study provides best practice guidelines for applying multi-agent systems in domain-specific problem-solving and implementing effective agent tuning strategies. Our empirical studies, particularly in the financial question-answering domain, demonstrate that our approach achieves 95.0% of GPT-4's performance, while effectively managing costs and ensuring data privacy.

cs.AI

SIX-Trust for 6G: Towards a Secure and Trustworthy 6G Network

Recent years have witnessed a digital explosion with the deployment of 5G and proliferation of 5G-enabled innovations. Compared with 5G, 6G is envisioned to achieve much higher performance in terms of latency, data rate, connectivity, energy efficiency, coverage and mobility. To fulfil these expectations, 6G will experience a number of paradigm shifts, such as exploiting new spectrum, applying ubiquitous ML/AI technologies and building a space-air-ground-sea integrated network. However, these paradigm shifts may lead to numerous new security and privacy issues, which traditional security measures may not be able to deal with. To tackle these issues and build a trustworthy 6G network, we introduce a novel trust framework named as SIX-Trust, which composes of 3 layers: sustainable trust (S-Trust), infrastructure trust (I-Trust) and xenogenesis trust (X-Trust). Each layer plays a different role, and the importance of each layer varies for different application scenarios of 6G. For each layer, we briefly introduce its related enabling technologies, and demonstrate how these technologies can be applied to enhance trust and security of the 6G network. In general, SIX-Trust provides a holistic framework for defining and modeling trust of 6G, which can facilitate establishing a trustworthy 6G network.

cs.IT