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Yiyu Shi

Publications and source records attributed to Yiyu Shi.

At least 37 records · Page 2Linked to original sources

ADRD-Bench: A Preliminary LLM Benchmark for Alzheimer's Disease and Related Dementias

Large language models (LLMs) have shown great potential for healthcare applications. However, existing evaluation benchmarks provide minimal coverage of Alzheimer's Disease and Related Dementias (ADRD). To address this gap, we introduce ADRD-Bench, a preliminary ADRD-specific LLM benchmark. ADRD-Bench has two components: 1) ADRD Unified QA, a synthesis of 1,438 questions consolidated from seven established medical benchmarks, providing a unified assessment of clinical knowledge; and 2) ADRD Caregiving QA, a novel set of 149 questions derived from a nationally adopted, large clinical trials supported brain health management program, mitigating the lack of practical caregiving context in existing benchmarks. We evaluated 36 state-of-the-art LLMs on the proposed ADRD-Bench. Results showed that the accuracy of open-weight general models, open-weight medical models, and frontier closed-source general models ranged from 0.63 to 0.93 (mean: 0.77; std: 0.09), 0.47 to 0.93 (mean: 0.81; std: 0.14), and 0.83 to 0.93 (mean: 0.90; std: 0.03), respectively. While top-tier models achieved high accuracies (>0.9), case studies revealed inconsistent reasoning quality and stability, highlighting a critical need for domain-specific improvement to enhance LLMs' knowledge and reasoning grounded in daily caregiving data. The entire dataset is available at https://github.com/IIRL-ND/ADRD-Bench.

cs.CL↗

MemEye: A Visual-Centric Evaluation Framework for Multimodal Agent Memory

Long-term agent memory is increasingly multimodal, yet existing evaluations rarely test whether agents preserve the visual evidence needed for later reasoning. In prior work, many visually grounded questions can be answered using only captions or textual traces, allowing answers to be inferred without preserving the fine-grained visual evidence. Meanwhile, harder cases that require reasoning over changing visual states are largely absent. Therefore, we introduce MemEye, a framework that evaluates memory capabilities from two dimensions: one measures the granularity of decisive visual evidence (from scene-level to pixel-level evidence), and the other measures how retrieved evidence must be used (from single evidence to evolutionary synthesis). Under this framework, we construct a new benchmark across 8 life-scenario tasks, with ablation-driven validation gates for assessing answerability, shortcut resistance, visual necessity, and reasoning structure. By evaluating 13 memory methods across 4 VLM backbones, we show that current architectures still struggle to preserve fine-grained visual details and reason about state changes over time. Our findings show that long-term multimodal memory depends on evidence routing, temporal tracking, and detail extraction.

cs.CV↗

An Empirical Study of Agent Skills for Healthcare: Practice, Gaps, and Governance

Healthcare automation is shaped by local procedures and organizational constraints, so agent capabilities rarely transfer unchanged across settings. Agent skills, self-contained directories that package reusable procedures for AI agents, are emerging as a procedural layer for adapting healthcare agents across diverse healthcare settings. We present the first empirical analysis of healthcare agent skills, drawing on 557 healthcare-related skills filtered from 58,159 public skills on ClawHub and annotated along ten dimensions covering function, deployment context, autonomy, and safety. We find that public healthcare skills emphasize patient-facing workflow automation and monitoring rather than the diagnostic and treatment-oriented tasks foregrounded in healthcare-agent research; coverage of the healthcare lifecycle and specialized clinical inputs remains uneven; and general technical risk does not reliably capture clinical risk. These findings position healthcare skills as a procedural layer not yet addressed by current benchmarks and risk frameworks.

cs.AI↗

Report for NSF Workshop on Algorithm-Hardware Co-design for Medical Applications

This report summarizes the discussions and recommendations from the NSF Workshop on Algorithm-Hardware Co-design for Medical Applications, held on September 26-27, 2024, in Pittsburgh, PA. The workshop assembled an interdisciplinary cohort of researchers, clinicians, and industry leaders to examine foundational challenges and develop a strategic roadmap for algorithm-hardware co-design in medical computing. The workshop focuses on four thematic areas: (1) teleoperations, telehealth, and surgical operations; (2) wearable and implantable medicine, including implantable living pharmacies; (3) home ICU, hospital systems, and elderly care; and (4) medical sensing, imaging, and reconstruction. This report calls for a fundamental shift in how next-generation medical technologies are conceived, designed, validated, and translated into practice. The report recommends that NSF sustain investment in shared standardized data infrastructures and compute infrastructures, develop clinic workflow-aware systems and human-AI collaboration frameworks, promote scalable validation ecosystems grounded in objective, continuous measures, and physics-informed, and enable safe, accountable, and resilient platforms, including virtual-physical healthcare ecosystems, to de-risk translational pathways. The workshop information can be found on the website: https://sites.google.com/view/nsfworkshop.

cs.ET↗

SGI: Structured 2D Gaussians for Efficient and Compact Large Image Representation

2D Gaussian Splatting has emerged as a novel image representation technique that can support efficient rendering on low-end devices. However, scaling to high-resolution images requires optimizing and storing millions of unstructured Gaussian primitives independently, leading to slow convergence and redundant parameters. To address this, we propose Structured Gaussian Image (SGI), a compact and efficient framework for representing high-resolution images. SGI decomposes a complex image into multi-scale local spaces defined by a set of seeds. Each seed corresponds to a spatially coherent region and, together with lightweight multi-layer perceptrons (MLPs), generates structured implicit 2D neural Gaussians. This seed-based formulation imposes structural regularity on otherwise unstructured Gaussian primitives, which facilitates entropy-based compression at the seed level to reduce the total storage. However, optimizing seed parameters directly on high-resolution images is a challenging and non-trivial task. Therefore, we designed a multi-scale fitting strategy that refines the seed representation in a coarse-to-fine manner, substantially accelerating convergence. Quantitative and qualitative evaluations demonstrate that SGI achieves up to 7.5x compression over prior non-quantized 2D Gaussian methods and 1.6x over quantized ones, while also delivering 1.6x and 6.5x faster optimization, respectively, without degrading, and often improving, image fidelity. Code is available at https://github.com/zx-pan/SGI.

cs.CV↗

When Small Variations Become Big Failures: Reliability Challenges in Compute-in-Memory Neural Accelerators

Compute-in-memory (CiM) architectures promise significant improvements in energy efficiency and throughput for deep neural network acceleration by alleviating the von Neumann bottleneck. However, their reliance on emerging non-volatile memory devices introduces device-level non-idealities-such as write variability, conductance drift, and stochastic noise-that fundamentally challenge reliability, predictability, and safety, especially in safety-critical applications. This talk examines the reliability limits of CiM-based neural accelerators and presents a series of techniques that bridge device physics, architecture, and learning algorithms to address these challenges. We first demonstrate that even small device variations can lead to disproportionately large accuracy degradation and catastrophic failures in safety-critical inference workloads, revealing a critical gap between average-case evaluations and worst-case behavior. Building on this insight, we introduce SWIM, a selective write-verify mechanism that strategically applies verification only where it is most impactful, significantly improving reliability while maintaining CiM's efficiency advantages. Finally, we explore a learning-centric solution that improves realistic worst-case performance by training neural networks with right-censored Gaussian noise, aligning training assumptions with hardware-induced variability and enabling robust deployment without excessive hardware overhead. Together, these works highlight the necessity of cross-layer co-design for CiM accelerators and provide a principled path toward dependable, efficient neural inference on emerging memory technologies-paving the way for their adoption in safety- and reliability-critical systems.

cs.LG↗

Patient-Conditioned Adaptive Offsets for Reliable Diagnosis across Subgroups

AI models for medical diagnosis often exhibit uneven performance across patient populations due to heterogeneity in disease prevalence, imaging appearance, and clinical risk profiles. Existing algorithmic fairness approaches typically seek to reduce such disparities by suppressing sensitive attributes. However, in medical settings these attributes often carry essential diagnostic information, and removing them can degrade accuracy and reliability, particularly in high-stakes applications. In contrast, clinical decision making explicitly incorporates patient context when interpreting diagnostic evidence, suggesting a different design direction for subgroup-aware models. In this paper, we introduce HyperAdapt, a patient-conditioned adaptation framework that improves subgroup reliability while maintaining a shared diagnostic model. Clinically relevant attributes such as age and sex are encoded into a compact embedding and used to condition a hypernetwork-style module, which generates small residual modulation parameters for selected layers of a shared backbone. This design preserves the general medical knowledge learned by the backbone while enabling targeted adjustments that reflect patient-specific variability. To ensure efficiency and robustness, adaptations are constrained through low-rank and bottlenecked parameterizations, limiting both model complexity and computational overhead. Experiments across multiple public medical imaging benchmarks demonstrate that the proposed approach consistently improves subgroup-level performance without sacrificing overall accuracy. On the PAD-UFES-20 dataset, our method outperforms the strongest competing baseline by 4.1% in recall and 4.4% in F1 score, with larger gains observed for underrepresented patient populations.

cs.CV↗

Driving Through Uncertainty: Risk-Averse Control with LLM Commonsense for Autonomous Driving under Perception Deficits

Partial perception deficits can compromise autonomous vehicle safety by disrupting environmental understanding. Existing protocols typically default to entirely risk-avoidant actions such as immediate stops, which are detrimental to navigation goals and lack flexibility for rare driving scenarios. Yet, in cases of minor risk, halting the vehicle may be unnecessary, and more adaptive responses are preferable. In this paper, we propose LLM-RCO, a risk-averse framework leveraging large language models (LLMs) to integrate human-like driving commonsense into autonomous systems facing perception deficits. LLM-RCO features four key modules interacting with the dynamic driving environment: hazard inference, short-term motion planner, action condition verifier, and safety constraint generator, enabling proactive and context-aware actions in such challenging conditions. To enhance the driving decision-making of LLMs, we construct DriveLM-Deficit, a dataset of 53,895 video clips featuring deficits of safety-critical objects, annotated for LLM fine-tuning in hazard detection and motion planning. Extensive experiments in adverse driving conditions with the CARLA simulator demonstrate that LLM-RCO promotes proactive maneuvers over purely risk-averse actions in perception deficit scenarios, underscoring its value for boosting autonomous driving resilience against perception loss challenges.

cs.RO↗

H-CNN-ViT: A Hierarchical Gated Attention Multi-Branch Model for Bladder Cancer Recurrence Prediction

Bladder cancer is one of the most prevalent malignancies worldwide, with a recurrence rate of up to 78%, necessitating accurate post-operative monitoring for effective patient management. Multi-sequence contrast-enhanced MRI is commonly used for recurrence detection; however, interpreting these scans remains challenging, even for experienced radiologists, due to post-surgical alterations such as scarring, swelling, and tissue remodeling. AI-assisted diagnostic tools have shown promise in improving bladder cancer recurrence prediction, yet progress in this field is hindered by the lack of dedicated multi-sequence MRI datasets for recurrence assessment study. In this work, we first introduce a curated multi-sequence, multi-modal MRI dataset specifically designed for bladder cancer recurrence prediction, establishing a valuable benchmark for future research. We then propose H-CNN-ViT, a new Hierarchical Gated Attention Multi-Branch model that enables selective weighting of features from the global (ViT) and local (CNN) paths based on contextual demands, achieving a balanced and targeted feature fusion. Our multi-branch architecture processes each modality independently, ensuring that the unique properties of each imaging channel are optimally captured and integrated. Evaluated on our dataset, H-CNN-ViT achieves an AUC of 78.6%, surpassing state-of-the-art models. Our model is publicly available at https://github.com/XLIAaron/H-CNN-ViT.

cs.CV↗

MediQ-GAN: Quantum-Inspired GAN for High Resolution Medical Image Generation

Machine learning-assisted diagnosis shows promise, yet medical imaging datasets are often scarce, imbalanced, and constrained by privacy, making data augmentation essential. Classical generative models typically demand extensive computational and sample resources. Quantum computing offers a promising alternative, but existing quantum-based image generation methods remain limited in scale and often face barren plateaus. We present MediQ-GAN, a quantum-inspired GAN with prototype-guided skip connections and a dual-stream generator that fuses classical and quantum-inspired branches. Its variational quantum circuits inherently preserve full-rank mappings, avoid rank collapse, and are theory-guided to balance expressivity with trainability. Beyond generation quality, we provide the first latent-geometry and rank-based analysis of quantum-inspired GANs, offering theoretical insight into their performance. Across three medical imaging datasets, MediQ-GAN outperforms state-of-the-art GANs and diffusion models. While validated on IBM hardware for robustness, our contribution is hardware-agnostic, offering a scalable and data-efficient framework for medical image generation and augmentation.

cs.CV↗

Rethinking Medical Anomaly Detection in Brain MRI: An Image Quality Assessment Perspective

Reconstruction-based methods, particularly those leveraging autoencoders, have been widely adopted for anomaly detection task in brain MRI. Unlike most existing works try to improve the task accuracy through architectural or algorithmic innovations, we tackle this task from image quality assessment (IQA) perspective, an under-explored direction in the field. Due to the limitations of conventional metrics such as l1 in capturing the nuanced differences in reconstructed images for medical anomaly detection, we propose fusion quality, a novel metric that wisely integrates the structure-level sensitivity of Structural Similarity Index Measure (SSIM) with the pixel-level precision of l1. The metric offers a more comprehensive assessment of reconstruction quality, considering intensity (subtractive property of l1 and divisive property of SSIM), contrast, and structural similarity. Furthermore, the proposed metric makes subtle regional variations more impactful in the final assessment. Thus, considering the inherent divisive properties of SSIM, we design an average intensity ratio (AIR)-based data transformation that amplifies the divisive discrepancies between normal and abnormal regions, thereby enhancing anomaly detection. By fusing the aforementioned two components, we devise the IQA approach. Experimental results on two distinct brain MRI datasets show that our IQA approach significantly enhances medical anomaly detection performance when integrated with state-of-the-art baselines.

eess.IV↗

AT-CXR: Uncertainty-Aware Agentic Triage for Chest X-rays

Agentic AI is advancing rapidly, yet truly autonomous medical-imaging triage, where a system decides when to stop, escalate, or defer under real constraints, remains relatively underexplored. To address this gap, we introduce AT-CXR, an uncertainty-aware agent for chest X-rays. The system estimates per-case confidence and distributional fit, then follows a stepwise policy to issue an automated decision or abstain with a suggested label for human intervention. We evaluate two router designs that share the same inputs and actions: a deterministic rule-based router and an LLM-decided router. Across five-fold evaluation on a balanced subset of NIH ChestX-ray14 dataset, both variants outperform strong zero-shot vision-language models and state-of-the-art supervised classifiers, achieving higher full-coverage accuracy and superior selective-prediction performance, evidenced by a lower area under the risk-coverage curve (AURC) and a lower error rate at high coverage, while operating with lower latency that meets practical clinical constraints. The two routers provide complementary operating points, enabling deployments to prioritize maximal throughput or maximal accuracy. Our code is available at https://github.com/XLIAaron/uncertainty-aware-cxr-agent.

eess.IV↗

Special Session: Sustainable Deployment of Deep Neural Networks on Non-Volatile Compute-in-Memory Accelerators

Non-volatile memory (NVM) based compute-in-memory (CIM) accelerators have emerged as a sustainable solution to significantly boost energy efficiency and minimize latency for Deep Neural Networks (DNNs) inference due to their in-situ data processing capabilities. However, the performance of NVCIM accelerators degrades because of the stochastic nature and intrinsic variations of NVM devices. Conventional write-verify operations, which enhance inference accuracy through iterative writing and verification during deployment, are costly in terms of energy and time. Inspired by negative feedback theory, we present a novel negative optimization training mechanism to achieve robust DNN deployment for NVCIM. We develop an Oriented Variational Forward (OVF) training method to implement this mechanism. Experiments show that OVF outperforms existing state-of-the-art techniques with up to a 46.71% improvement in inference accuracy while reducing epistemic uncertainty. This mechanism reduces the reliance on write-verify operations and thus contributes to the sustainable and practical deployment of NVCIM accelerators, addressing performance degradation while maintaining the benefits of sustainable computing with NVCIM accelerators.

cs.AR↗

NeFT: Negative Feedback Training to Improve Robustness of Compute-In-Memory DNN Accelerators

Compute-in-memory accelerators built upon non-volatile memory devices excel in energy efficiency and latency when performing deep neural network (DNN) inference, thanks to their in-situ data processing capability. However, the stochastic nature and intrinsic variations of non-volatile memory devices often result in performance degradation during DNN inference. Introducing these non-ideal device behaviors in DNN training enhances robustness, but drawbacks include limited accuracy improvement, reduced prediction confidence, and convergence issues. This arises from a mismatch between the deterministic training and non-deterministic device variations, as such training, though considering variations, relies solely on the model's final output. In this work, inspired by control theory, we propose Negative Feedback Training (NeFT), a novel concept supported by theoretical analysis, to more effectively capture the multi-scale noisy information throughout the network. We instantiate this concept with two specific instances, oriented variational forward (OVF) and intermediate representation snapshot (IRS). Based on device variation models extracted from measured data, extensive experiments show that our NeFT outperforms existing state-of-the-art methods with up to a 45.08% improvement in inference accuracy while reducing epistemic uncertainty, boosting output confidence, and improving convergence probability. These results underline the generality and practicality of our NeFT framework for increasing the robustness of DNNs against device variations. The source code for these two instances is available at https://github.com/YifanQin-ND/NeFT_CIM

cs.LG↗

CompressKV: Semantic Retrieval Heads Know What Tokens are Not Important Before Generation

Recent advances in large language models (LLMs) have significantly boosted long-context processing. However, the increasing key-value (KV) cache size poses critical challenges to memory and execution efficiency. Most KV cache compression methods rely on heuristic token eviction using all attention heads in Grouped Query Attention (GQA)-based LLMs. This method ignores the different functionalities of attention heads, leading to the eviction of critical tokens and thus degrades the performance of LLMs. To address the issue above, instead of using all the attention heads in GQA-based LLMs to determine important tokens as in the previous work, we first identify the attention heads in each layer that are not only capable of retrieving the initial and final tokens of a prompt, but also capable of retrieving important tokens within the text and attending to their surrounding semantic context. Afterwards, we exploit such heads to determine the important tokens and retain their corresponding KV cache pairs. Furthermore, we analyze the cache eviction error of each layer individually and introduce a layer-adaptive KV cache allocation strategy. Experimental results demonstrate the proposed CompressKV consistently outperforms state-of-the-art approaches under various memory budgets on LongBench and Needle-in-a-Haystack benchmarks. Our code is publicly available at: https://github.com/TUDa-HWAI/CompressKV.git.

cs.CL↗

Tiny-Align: Bridging Automatic Speech Recognition and Large Language Model on the Edge

The combination of Large Language Models (LLM) and Automatic Speech Recognition (ASR), when deployed on edge devices (called edge ASR-LLM), can serve as a powerful personalized assistant to enable audio-based interaction for users. Compared to text-based interaction, edge ASR-LLM allows accessible and natural audio interactions. Unfortunately, existing ASR-LLM models are mainly trained in high-performance computing environments and produce substantial model weights, making them difficult to deploy on edge devices. More importantly, to better serve users' personalized needs, the ASR-LLM must be able to learn from each distinct user, given that audio input often contains highly personalized characteristics that necessitate personalized on-device training. Since individually fine-tuning the ASR or LLM often leads to suboptimal results due to modality-specific limitations, end-to-end training ensures seamless integration of audio features and language understanding (cross-modal alignment), ultimately enabling a more personalized and efficient adaptation on edge devices. However, due to the complex training requirements and substantial computational demands of existing approaches, cross-modal alignment between ASR audio and LLM can be challenging on edge devices. In this work, we propose a resource-efficient cross-modal alignment framework that bridges ASR and LLMs on edge devices to handle personalized audio input. Our framework enables efficient ASR-LLM alignment on resource-constrained devices like NVIDIA Jetson Orin (8GB RAM), achieving 50x training time speedup while improving the alignment quality by more than 50\%. To the best of our knowledge, this is the first work to study efficient ASR-LLM alignment on resource-constrained edge devices.

cs.SD↗

Contrastive Learning with Diffusion Features for Weakly Supervised Medical Image Segmentation

Weakly supervised semantic segmentation (WSSS) methods using class labels often rely on class activation maps (CAMs) to localize objects. However, traditional CAM-based methods struggle with partial activations and imprecise object boundaries due to optimization discrepancies between classification and segmentation. Recently, the conditional diffusion model (CDM) has been used as an alternative for generating segmentation masks in WSSS, leveraging its strong image generation capabilities tailored to specific class distributions. By modifying or perturbing the condition during diffusion sampling, the related objects can be highlighted in the generated images. Yet, the saliency maps generated by CDMs are prone to noise from background alterations during reverse diffusion. To alleviate the problem, we introduce Contrastive Learning with Diffusion Features (CLDF), a novel method that uses contrastive learning to train a pixel decoder to map the diffusion features from a frozen CDM to a low-dimensional embedding space for segmentation. Specifically, we integrate gradient maps generated from CDM external classifier with CAMs to identify foreground and background pixels with fewer false positives/negatives for contrastive learning, enabling robust pixel embedding learning. Experimental results on four segmentation tasks from two public medical datasets demonstrate that our method significantly outperforms existing baselines.

cs.CV↗

Inpainting is All You Need: A Diffusion-based Augmentation Method for Semi-supervised Medical Image Segmentation

Collecting pixel-level labels for medical datasets can be a laborious and expensive process, and enhancing segmentation performance with a scarcity of labeled data is a crucial challenge. This work introduces AugPaint, a data augmentation framework that utilizes inpainting to generate image-label pairs from limited labeled data. AugPaint leverages latent diffusion models, known for their ability to generate high-quality in-domain images with low overhead, and adapts the sampling process for the inpainting task without need for retraining. Specifically, given a pair of image and label mask, we crop the area labeled with the foreground and condition on it during reversed denoising process for every noise level. Masked background area would gradually be filled in, and all generated images are paired with the label mask. This approach ensures the accuracy of match between synthetic images and label masks, setting it apart from existing dataset generation methods. The generated images serve as valuable supervision for training downstream segmentation models, effectively addressing the challenge of limited annotations. We conducted extensive evaluations of our data augmentation method on four public medical image segmentation datasets, including CT, MRI, and skin imaging. Results across all datasets demonstrate that AugPaint outperforms state-of-the-art label-efficient methodologies, significantly improving segmentation performance.

cs.CV↗