arXiv subjects

Yoeri E. Boink

Publications and source records attributed to Yoeri E. Boink.

4 recordsLinked to original sources

arXiv2020

Learned SVD: solving inverse problems via hybrid autoencoding

Our world is full of physics-driven data where effective mappings between data manifolds are desired. There is an increasing demand for understanding combined model-based and data-driven methods. We propose a nonlinear, learned singular value decomposition (L-SVD), which combines autoencoders that simultaneously learn and connect latent codes for desired signals and given measurements. We provide a convergence analysis for a specifically structured L-SVD that acts as a regularisation method. In a more general setting, we investigate the topic of model reduction via data dimensionality reduction to obtain a regularised inversion. We present a promising direction for solving inverse problems in cases where the underlying physics are not fully understood or have very complex behaviour. We show that the building blocks of learned inversion maps can be obtained automatically, with improved performance upon classical methods and better interpretability than black-box methods.

cs.LG↗

arXiv2020

Data-consistent neural networks for solving nonlinear inverse problems

Data assisted reconstruction algorithms, incorporating trained neural networks, are a novel paradigm for solving inverse problems. One approach is to first apply a classical reconstruction method and then apply a neural network to improve its solution. Empirical evidence shows that such two-step methods provide high-quality reconstructions, but they lack a convergence analysis. In this paper we formalize the use of such two-step approaches with classical regularization theory. We propose data-consistent neural networks that we combine with classical regularization methods. This yields a data-driven regularization method for which we provide a full convergence analysis with respect to noise. Numerical simulations show that compared to standard two-step deep learning methods, our approach provides better stability with respect to structural changes in the test set, while performing similarly on test data similar to the training set. Our method provides a stable solution of inverse problems that exploits both the known nonlinear forward model as well as the desired solution manifold from data.

math.NA↗

arXiv2019

A Partially Learned Algorithm for Joint Photoacoustic Reconstruction and Segmentation

In an inhomogeneously illuminated photoacoustic image, important information like vascular geometry is not readily available when only the initial pressure is reconstructed. To obtain the desired information, algorithms for image segmentation are often applied as a post-processing step. In this work, we propose to jointly acquire the photoacoustic reconstruction and segmentation, by modifying a recently developed partially learned algorithm based on a convolutional neural network. We investigate the stability of the algorithm against changes in initial pressures and photoacoustic system settings. These insights are used to develop an algorithm that is robust to input and system settings. Our approach can easily be applied to other imaging modalities and can be modified to perform other high-level tasks different from segmentation. The method is validated on challenging synthetic and experimental photoacoustic tomography data in limited angle and limited view scenarios. It is computationally less expensive than classical iterative methods and enables higher quality reconstructions and segmentations than state-of-the-art learned and non-learned methods.

eess.IV↗

arXiv2017

A Framework for Directional and Higher-Order Reconstruction in Photoacoustic Tomography

Photoacoustic tomography is a hybrid imaging technique that combines high optical tissue contrast with high ultrasound resolution. Direct reconstruction methods such as filtered backprojection, time reversal and least squares suffer from curved line artefacts and blurring, especially in case of limited angles or strong noise. In recent years, there has been great interest in regularised iterative methods. These methods employ prior knowledge on the image to provide higher quality reconstructions. However, easy comparisons between regularisers and their properties are limited, since many tomography implementations heavily rely on the specific regulariser chosen. To overcome this bottleneck, we present a modular reconstruction framework for photoacoustic tomography. It enables easy comparisons between regularisers with different properties, e.g. nonlinear, higher-order or directional. We solve the underlying minimisation problem with an efficient first-order primal-dual algorithm. Convergence rates are optimised by choosing an operator dependent preconditioning strategy. Our reconstruction methods are tested on challenging 2D synthetic and experimental data sets. They outperform direct reconstruction approaches for strong noise levels and limited angle measurements, offering immediate benefits in terms of acquisition time and quality. This work provides a basic platform for the investigation of future advanced regularisation methods in photoacoustic tomography.

math.NA↗