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Yu Lin

Publications and source records attributed to Yu Lin.

66 records · Page 4Linked to original sources

Modeling Dynamic Heterogeneous Network for Link Prediction using Hierarchical Attention with Temporal RNN

Network embedding aims to learn low-dimensional representations of nodes while capturing structure information of networks. It has achieved great success on many tasks of network analysis such as link prediction and node classification. Most of existing network embedding algorithms focus on how to learn static homogeneous networks effectively. However, networks in the real world are more complex, e.g., networks may consist of several types of nodes and edges (called heterogeneous information) and may vary over time in terms of dynamic nodes and edges (called evolutionary patterns). Limited work has been done for network embedding of dynamic heterogeneous networks as it is challenging to learn both evolutionary and heterogeneous information simultaneously. In this paper, we propose a novel dynamic heterogeneous network embedding method, termed as DyHATR, which uses hierarchical attention to learn heterogeneous information and incorporates recurrent neural networks with temporal attention to capture evolutionary patterns. We benchmark our method on four real-world datasets for the task of link prediction. Experimental results show that DyHATR significantly outperforms several state-of-the-art baselines.

cs.SI

Deep Learning on Knowledge Graph for Recommender System: A Survey

Recent advances in research have demonstrated the effectiveness of knowledge graphs (KG) in providing valuable external knowledge to improve recommendation systems (RS). A knowledge graph is capable of encoding high-order relations that connect two objects with one or multiple related attributes. With the help of the emerging Graph Neural Networks (GNN), it is possible to extract both object characteristics and relations from KG, which is an essential factor for successful recommendations. In this paper, we provide a comprehensive survey of the GNN-based knowledge-aware deep recommender systems. Specifically, we discuss the state-of-the-art frameworks with a focus on their core component, i.e., the graph embedding module, and how they address practical recommendation issues such as scalability, cold-start and so on. We further summarize the commonly-used benchmark datasets, evaluation metrics as well as open-source codes. Finally, we conclude the survey and propose potential research directions in this rapidly growing field.

cs.IR

Magnetohydrodynamic with embedded particle-in-cell simulation of the Geospace Environment Modeling dayside kinetic processes challenge event

We use the MHD with embedded particle-in-cell model (MHD-EPIC) to study the Geospace Environment Modeling (GEM) dayside kinetic processes challenge event at 01:50-03:00 UT on 2015-11-18, when the magnetosphere was driven by a steady southward IMF. In the MHD-EPIC simulation, the dayside magnetopause is covered by a PIC code so that the dayside reconnection is properly handled. We compare the magnetic fields and the plasma profiles of the magnetopause crossing with the MMS3 spacecraft observations. Most variables match the observations well in the magnetosphere, in the magnetosheath, and also during the current sheet crossing. The MHD-EPIC simulation produces flux ropes, and we demonstrate that some magnetic field and plasma features observed by the MMS3 spacecraft can be reproduced by a flux rope crossing event. We use an algorithm to automatically identify the reconnection sites from the simulation results. It turns out that there are usually multiple X-lines at the magnetopause. By tracing the locations of the X-lines, we find the typical moving speed of the X-line endpoints is about 70~km/s, which is higher than but still comparable with the ground-based observations.

physics.space-ph

Asymptotic approximations of the continuous Hahn polynomials and their zeros

Asymptotic approximations for the continuous Hahn polynomials and their zeros as the degree grows to infinity are established via their three-term recurrence relation. The methods are based on the uniform asymptotic expansions for difference equations developed by Wang and Wong (\textit{Numer. Math.}, 2003) and the matching technique in the complex plane developed by Wang (\textit{J. Approx. Theory}, 2014).

math.CA

Designing wildlife crossing structures for ungulates in a desert landscape: A case study in China

This paper reports on the design of wildlife crossing structures (WCSs) along a new expressway in China, which exemplifies the country's increasing efforts on wildlife protection in infrastructure projects. The expert knowledge and field surveys were used to determine the target species in the study area and the quantity, locations, size, and type of the WCSs. The results on relative abundance index and encounter rate showed that the ibex (\textit{Capra ibex}), argali sheep (Ovis ammon), and goitered gazelle (Gazella subgutturosa) are the main ungulates in the study area. Among them, the goitered gazelle is the most widely distributed species. WCSs were proposed based on the estimated crossing hotspots. The mean deviation distance between those hotspots and their nearest proposed WCSs is around 341m. In addition, those 16 proposed underpass WCSs have a width of no less than 12m and height of no lower than 3.5m, which is believed to be sufficient for ungulates in the area. Given the limited availability of high-resolution movement data and wildlife-vehicle collision data during road's early design stage, the approach demonstrated in this paper facilitates practical spatial planning and provides insights into designing WCSs in a desert landscape.

q-bio.PE

Synthesis and electronic structure characterization of diamane

Atomically thin graphite, known as graphene, has been a marvel in material science because of its exceptional properties, novel physics and promising applications. Atomically thin diamond, called diamane, has also attracted considerable scientific interest due to its potential physical and mechanical properties. However, until now there has been no reports of successful synthesis of a free-standing pristine diamane film. Here, we report the synthesis and electronic structure characterization of diamane. Electrical measurements, x-ray diffraction and theoretical simulations reveal that trilayer and thicker graphene transform to hexagonal diamane (h-diamane) when compressed to above 20 GPa, which can be preserved down to few GPa. Raman studies indicate that the sample quenched from high pressure and high temperature also has a h-diamane structure, i.e., h-diamane is recovered back to ambient conditions. Optical absorption and band structure calculations reveal an indirect energy gap of 2.8 eV in the diamane film. Compared to gapless graphene, diamane with sizable bandgap may open up new applications of carbon semiconductors.

cond-mat.mtrl-sci

Skyblocking for Entity Resolution

In this paper, for the first time, we introduce the concept of skyblocking, which aims to efficiently identify the "most preferred" blocking scheme in terms of a given set of selection criteria for entity resolution blocking. To capture all possible preferred blocking schemes, scheme skyline (i.e. blocking schemes on the skyline) has been studied in a multi-dimensional scheme space with dimensions corresponding to selection criteria for blocking (e.g. PC and PQ). However, applying traditional skyline techniques to learn scheme skylines is a non-trivial task. Due to the unique characteristics of blocking schemes, we face several challenges, such as: how to find a balanced number of match and non-match labels to effectively approximate a block scheme in a scheme space, and how to design efficient skyline algorithms to explore a scheme space for finding scheme skylines. To overcome these challenges, we propose a scheme skyline learning approach, which incorporates skyline techniques into an active learning process of scheme skylines. We have conducted experiments over four real-world datasets. The experimental results show that our approach is able to efficiently identify scheme skylines in a large scheme space only using a limited number of labels. Our approach also outperforms the state-of-the-art approaches for learning blocking schemes in several aspects, including: label efficiency, blocking quality and learning efficiency.

cs.DB

Pressure induced metallization with absence of structural transition in layered MoSe2

Layered transition-metal dichalcogenides have emerged as exciting material systems with atomically thin geometries and unique electronic properties. Pressure is a powerful tool for continuously tuning their crystal and electronic structures away from the pristine states. Here, we systematically investigated the pressurized behavior of MoSe2 up to ~ 60 GPa using multiple experimental techniques and ab -initio calculations. MoSe2 evolves from an anisotropic two-dimensional layered network to a three-dimensional structure without a structural transition, which is a complete contrast to MoS2. The role of the chalcogenide anions in stabilizing different layered patterns is underscored by our layer sliding calculations. MoSe2 possesses highly tunable transport properties under pressure, determined by the gradual narrowing of its band-gap followed by metallization. The continuous tuning of its electronic structure and band-gap in the range of visible light to infrared suggest possible energy-variable optoelectronics applications in pressurized transition-metal dichalcogenides.

cond-mat.mtrl-sci

Weights with both absolutely continuous and discrete components: Asymptotics via the Riemann-Hilbert approach

We study the uniform asymptotics for the orthogonal polynomials with respect to weights composed of both absolutely continuous measure and discrete measure, by taking a special class of the sieved Pollazek Polynomials as an example. The Plancherel-Rotach type asymptotics of the sieved Pollazek Polynomials are obtained in the whole complex plane. The Riemann-Hilbert method is applied to derive the results. A main feature of the treatment is the appearance of a new band consisting of two adjacent intervals, one of which is a portion of the support of the absolutely continuous measure, the other is the discrete band.

math.CV

Uniform asymptotics for discrete orthogonal polynomials on infinite nodes with an accumulation point

In this paper, we develop the Riemann-Hilbert method to study the asymptotics of discrete orthogonal polynomials on infinite nodes with an accumulation point. To illustrate our method, we consider the Tricomi-Carlitz polynomials $f_n^{(α)}(z)$ where $α$ is a positive parameter. Uniform Plancherel-Rotach type asymptotic formulas are obtained in the entire complex plane including a neighborhood of the origin, and our results agree with the ones obtained earlier in [{\it SIAM J.\;Math.\;Anal} {\bf 25} (1994)] and [{{\it Proc.\;Amer.\;Math.\;Soc.\,}{\bf138} (2010)}].

math.CA

Phylogenetic Analysis of Cell Types using Histone Modifications

In cell differentiation, a cell of a less specialized type becomes one of a more specialized type, even though all cells have the same genome. Transcription factors and epigenetic marks like histone modifications can play a significant role in the differentiation process. In this paper, we present a simple analysis of cell types and differentiation paths using phylogenetic inference based on ChIP-Seq histone modification data. We propose new data representation techniques and new distance measures for ChIP-Seq data and use these together with standard phylogenetic inference methods to build biologically meaningful trees that indicate how diverse types of cells are related. We demonstrate our approach on H3K4me3 and H3K27me3 data for 37 and 13 types of cells respectively, using the dataset to explore various issues surrounding replicate data, variability between cells of the same type, and robustness. The promising results we obtain point the way to a new approach to the study of cell differentiation.

q-bio.QM

Existence and Uniqueness of Tronquée Solutions of the Third and Fourth Painlevé Equations

It is well-known that the first and second Painlevé equations admit solutions characterised by divergent asymptotic expansions near infinity in specified sectors of the complex plane. Such solutions are pole-free in these sectors and called tronquée solutions by Boutroux. In this paper, we show that similar solutions exist for the third and fourth Painlevé equations as well.

math.CA