arXiv subjects

Yuanzhe Xi

Publications and source records attributed to Yuanzhe Xi.

45 records · Page 3Linked to original sources

arXiv2020

A power Schur complement Low-Rank correction preconditioner for general sparse linear systems

An effective power based parallel preconditioner is proposed for general large sparse linear systems. The preconditioner combines a power series expansion method with some low-rank correction techniques, where the Sherman-Morrison-Woodbury formula is utilized. A matrix splitting of the Schur complement is proposed to expand the power series. The number of terms used in the power series expansion can control the approximation accuracy of the preconditioner to the inverse of the Schur complement. To construct the preconditioner, graph partitioning is invoked to reorder the original coefficient matrix, leading to a special block two-by-two matrix whose two off-diagonal submatrices are block diagonal. Variables corresponding to interface variables are obtained by solving a linear system with the coeffcient matrix being the Schur complement. For the variables related to the interior variables, one only needs to solve a block diagonal linear system. This can be performed efficiently in parallel. Various numerical examples are provided to illustrate that the efficiency of the proposed preconditioner.

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arXiv2019

Structured FISTA for Image Restoration

In this paper, we propose an efficient numerical scheme for solving some large scale ill-posed linear inverse problems arising from image restoration. In order to accelerate the computation, two different hidden structures are exploited. First, the coefficient matrix is approximated as the sum of a small number of Kronecker products. This procedure not only introduces one more level of parallelism into the computation but also enables the usage of computationally intensive matrix-matrix multiplications in the subsequent optimization procedure. We then derive the corresponding Tikhonov regularized minimization model and extend the fast iterative shrinkage-thresholding algorithm (FISTA) to solve the resulting optimization problem. Since the matrices appearing in the Kronecker product approximation are all structured matrices (Toeplitz, Hankel, etc.), we can further exploit their fast matrix-vector multiplication algorithms at each iteration. The proposed algorithm is thus called structured fast iterative shrinkage-thresholding algorithm (sFISTA). In particular, we show that the approximation error introduced by sFISTA is well under control and sFISTA can reach the same image restoration accuracy level as FISTA. Finally, both the theoretical complexity analysis and some numerical results are provided to demonstrate the efficiency of sFISTA.

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arXiv2018

Solving the 3D High-Frequency Helmholtz Equation using Contour Integration and Polynomial Preconditioning

We propose an iterative solution method for the 3D high-frequency Helmholtz equation that exploits a contour integral formulation of spectral projectors. In this framework, the solution in certain invariant subspaces is approximated by solving complex-shifted linear systems, resulting in faster GMRES iterations due to the restricted spectrum. The shifted systems are solved by exploiting a polynomial fixed-point iteration, which is a robust scheme even if the magnitude of the shift is small. Numerical tests in 3D indicate that $O(n^{1/3})$ matrix-vector products are needed to solve a high-frequency problem with a matrix size $n$ with high accuracy. The method has a small storage requirement, can be applied to both dense and sparse linear systems, and is highly parallelizable.

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arXiv2018

The Eigenvalues Slicing Library (EVSL): Algorithms, Implementation, and Software

This paper describes a software package called EVSL (for EigenValues Slicing Library) for solving large sparse real symmetric standard and generalized eigenvalue problems. As its name indicates, the package exploits spectrum slicing, a strategy that consists of dividing the spectrum into a number of subintervals and extracting eigenpairs from each subinterval independently. In order to enable such a strategy, the methods implemented in EVSL rely on a quick calculation of the spectral density of a given matrix, or a matrix pair. What distinguishes EVSL from other currently available packages is that EVSL relies entirely on filtering techniques. Polynomial and rational filtering are both implemented and are coupled with Krylov subspace methods and the subspace iteration algorithm. On the implementation side, the package offers interfaces for various scenarios including matrix-free modes, whereby the user can supply his/her own functions to perform matrix-vector operations or to solve sparse linear systems. The paper describes the algorithms in EVSL, provides details on their implementations, and discusses performance issues for the various methods.

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arXiv2017

Beyond AMLS: Domain decomposition with rational filtering

This paper proposes a rational filtering domain decomposition technique for the solution of large and sparse symmetric generalized eigenvalue problems. The proposed technique is purely algebraic and decomposes the eigenvalue problem associated with each subdomain into two disjoint subproblems. The first subproblem is associated with the interface variables and accounts for the interaction among neighboring subdomains. To compute the solution of the original eigenvalue problem at the interface variables we leverage ideas from contour integral eigenvalue solvers. The second subproblem is associated with the interior variables in each subdomain and can be solved in parallel among the different subdomains using real arithmetic only. Compared to rational filtering projection methods applied to the original matrix pencil, the proposed technique integrates only a part of the matrix resolvent while it applies any orthogonalization necessary to vectors whose length is equal to the number of interface variables. In addition, no estimation of the number of eigenvalues lying inside the interval of interest is needed. Numerical experiments performed in distributed memory architectures illustrate the competitiveness of the proposed technique against rational filtering Krylov approaches.

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arXiv2017

Fast computation of spectral densities for generalized eigenvalue problems

The distribution of the eigenvalues of a Hermitian matrix (or of a Hermitian matrix pencil) reveals important features of the underlying problem, whether a Hamiltonian system in physics, or a social network in behavioral sciences. However, computing all the eigenvalues explicitly is prohibitively expensive for real-world applications. This paper presents two types of methods to efficiently estimate the spectral density of a matrix pencil $(A, B)$ when both $A$ and $B$ are Hermitian and, in addition, $B$ is positive definite. The first one is based on the Kernel Polynomial Method (KPM) and the second on Gaussian quadrature by the Lanczos procedure. By employing Chebyshev polynomial approximation techniques, we can avoid direct factorizations in both methods, making the resulting algorithms suitable for large matrices. Under some assumptions, we prove bounds that suggest that the Lanczos method converges twice as fast as the KPM method. Numerical examples further indicate that the Lanczos method can provide more accurate spectral densities when the eigenvalue distribution is highly non-uniform. As an application, we show how to use the computed spectral density to partition the spectrum into intervals that contain roughly the same number of eigenvalues. This procedure, which makes it possible to compute the spectrum by parts, is a key ingredient in the new breed of eigensolvers that exploit "spectrum slicing".

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arXiv2017

SMASH: Structured matrix approximation by separation and hierarchy

This paper presents an efficient method to perform Structured Matrix Approximation by Separation and Hierarchy (SMASH), when the original dense matrix is associated with a kernel function. Given points in a domain, a tree structure is first constructed based on an adaptive partitioning of the computational domain to facilitate subsequent approximation procedures. In contrast to existing schemes based on either analytic or purely algebraic approximations, SMASH takes advantage of both approaches and greatly improves the efficiency. The algorithm follows a bottom-up traversal of the tree and is able to perform the operations associated with each node on the same level in parallel. A strong rank-revealing factorization is applied to the initial analytic approximation in the separation regime so that a special structure is incorporated into the final nested bases. As a consequence, the storage is significantly reduced on one hand and a hierarchy of the original grid is constructed on the other hand. Due to this hierarchy, nested bases at upper levels can be computed in a similar way as the leaf level operations but on coarser grids. The main advantages of SMASH include its simplicity of implementation, its flexibility to construct various hierarchical rank structures and a low storage cost. Rigorous error analysis and complexity analysis are conducted to show that this scheme is fast and stable. The efficiency and robustness of SMASH are demonstrated through various test problems arising from integral equations, structured matrices, etc.

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arXiv2015

A Thick-Restart Lanczos algorithm with polynomial filtering for Hermitian eigenvalue problems

Polynomial filtering can provide a highly effective means of computing all eigenvalues of a real symmetric (or complex Hermitian) matrix that are located in a given interval, anywhere in the spectrum. This paper describes a technique for tackling this problem by combining a Thick-Restart version of the Lanczos algorithm with deflation (`locking') and a new type of polynomial filters obtained from a least-squares technique. The resulting algorithm can be utilized in a `spectrum-slicing' approach whereby a very large number of eigenvalues and associated eigenvectors of the matrix are computed by extracting eigenpairs located in different sub-intervals independently from one another.

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arXiv2015

Schur Complement based domain decomposition preconditioners with Low-rank corrections

This paper introduces a robust preconditioner for general sparse symmetric matrices, that is based on low-rank approximations of the Schur complement in a Domain Decomposition (DD) framework. In this "Schur Low Rank" (SLR) preconditioning approach, the coefficient matrix is first decoupled by DD, and then a low-rank correction is exploited to compute an approximate inverse of the Schur complement associated with the interface points. The method avoids explicit formation of the Schur complement matrix. We show the feasibility of this strategy for a model problem, and conduct a detailed spectral analysis for the relationship between the low-rank correction and the quality of the preconditioning. Numerical experiments on general matrices illustrate the robustness and efficiency of the proposed approach.

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