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Yuehao Xu

Publications and source records attributed to Yuehao Xu.

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EvoRAG: Making Knowledge Graph-based RAG Automatically Evolve through Feedback-driven Backpropagation

Knowledge Graph-based Retrieval-Augmented Generation (KG-RAG) has emerged as a promising paradigm for enhancing LLM reasoning by retrieving multi-hop paths from KGs. However, existing KG-RAG frameworks often underperform in real-world scenarios because the pre-captured knowledge dependencies are not tailored to the downstream task or its evolving requirements. These frameworks struggle to adapt to task-specific requirements and lack mechanisms to filter low-contribution knowledge during generation. We observe that feedback on generated responses offers effective supervision for improving KG quality, as it directly reflects user expectations and provides insights into the correctness and usefulness of the output. However, a key challenge lies in effectively linking response-level feedback to triplet-level contribution evaluation and knowledge updates in the KG. In this work, we propose EvoRAG, a self-evolving KG-RAG framework that leverages the feedback over generated responses to continuously refine the KG and enhance reasoning accuracy. EvoRAG introduces a feedback-driven backpropagation mechanism that attributes feedback to retrieved paths by measuring their utility for response and propagates this utility back to individual triplets, supporting fine-grained KG refinements towards more adaptive and accurate reasoning. Through EvoRAG, we establish a closed loop that couples feedback, LLM, and graph data, continuously enhancing the performance and robustness in real-world scenarios. Experimental results show that EvoRAG improves reasoning accuracy by $7.34\%$ over state-of-the-art KG-RAG frameworks. The source code has been made available at https://github.com/iDC-NEU/EvoRAG.

cs.DB

Signature-Informed Selection Detection: A Novel Method for Multi-Locus Temporal Population Genetic Model with Recombination

In population genetics, there is often interest in inferring selection coefficients. This task becomes more challenging if multiple linked selected loci are considered simultaneously. For such a situation, we propose a novel generalized Bayesian framework where we compute a scoring rule posterior for the selection coefficients in multi-locus temporal population genetics models. As we consider trajectories of allele frequencies over time as our data, we choose to use a signature kernel scoring rule - a kernel scoring rule defined for high-dimensional time-series data using iterated path integrals of a path (called signatures). We can compute an unbiased estimate of the signature kernel score using model simulations. This enables us to sample asymptotically from the signature kernel scoring rule posterior of the selection coefficients using pseudo-marginal MCMC-type algorithms. Through a simulation study, we were able to show the inferential efficacy of our method compared to existing benchmark methods for two and three selected locus scenarios under the standard Wright-Fisher model with recombination and selection. We also consider a negative frequency-dependent selection model for one and two locus scenarios, and also joint inference of selection coefficients and initial haplotype frequencies under the standard Wright-Fisher model. Finally, we illustrate the application of our inferential method for two real-life dataset. More specifically, we consider a data set on Yeast, as well as data from an Evolve and Resequence (E\&R) experiment on {\em Drosophila simulans}.

stat.ME