arXiv subjects

Yuichi Yoshida

Publications and source records attributed to Yuichi Yoshida.

At least 91 records · Page 5Linked to original sources

arXiv2016

Cycle and flow trusses in directed networks

When we represent real-world systems as networks, the directions of links often convey valuable information. Finding module structures that respect link directions is one of the most important tasks for analyzing directed networks. Although many notions of a directed module have been proposed, no consensus has been reached. This lack of consensus results partly because there might exist distinct types of modules in a single directed network, whereas most previous studies focused on an independent criterion for modules. To address this issue, we propose a generic notion of the so-called truss structures in directed networks. Our definition of truss is able to extract two distinct types of trusses, named the cycle truss and the flow truss, from a unified framework. By applying the method for finding trusses to empirical networks obtained from a wide range of research fields, we find that most real networks contain both cycle and flow trusses. In addition, the abundance of (and the overlap between) the two types of trusses may be useful to characterize module structures in a wide variety of empirical networks. Our findings shed light on the importance of simultaneously considering different types of modules in directed networks.

cs.SI↗

arXiv2016

Minimizing Quadratic Functions in Constant Time

A sampling-based optimization method for quadratic functions is proposed. Our method approximately solves the following $n$-dimensional quadratic minimization problem in constant time, which is independent of $n$: $z^*=\min_{\mathbf{v} \in \mathbb{R}^n}\langle\mathbf{v}, A \mathbf{v}\rangle + n\langle\mathbf{v}, \mathrm{diag}(\mathbf{d})\mathbf{v}\rangle + n\langle\mathbf{b}, \mathbf{v}\rangle$, where $A \in \mathbb{R}^{n \times n}$ is a matrix and $\mathbf{d},\mathbf{b} \in \mathbb{R}^n$ are vectors. Our theoretical analysis specifies the number of samples $k(δ, ε)$ such that the approximated solution $z$ satisfies $|z - z^*| = O(εn^2)$ with probability $1-δ$. The empirical performance (accuracy and runtime) is positively confirmed by numerical experiments.

cs.LG↗

arXiv2016

Testing Assignments to Constraint Satisfaction Problems

For a finite relational structure A, let CSP(A) denote the CSP instances whose constraint relations are taken from A. The resulting family of problems CSP(A) has been considered heavily in a variety of computational contexts. In this article, we consider this family from the perspective of property testing: given an instance of a CSP and query access to an assignment, one wants to decide whether the assignment satisfies the instance, or is far from so doing. While previous works on this scenario studied concrete templates or restricted classes of structures, this article presents comprehensive classification theorems. Our first contribution is a dichotomy theorem completely characterizing the structures A such that CSP(A) is constant-query testable: (i) If A has a majority polymorphism and a Maltsev polymorphism, then CSP(A) is constant-query testable with one-sided error. (ii) Else, testing CSP(A) requires a super-constant number of queries. Let $\exists$CSP(A) denote the extension of CSP(A) to instances which may include existentially quantified variables. Our second contribution is to classify all structures A in terms of the number of queries needed to test assignments to instances of $\exists$CSP(A), with one-sided error. More specifically, we show the following trichotomy: (i) If A has a majority polymorphism and a Maltsev polymorphism, then $\exists$CSP(A) is constant-query testable with one-sided error. (ii) Else, if A has a $(k + 1)$-ary near-unanimity polymorphism for some $k \geq 2$, and no Maltsev polymorphism then $\exists$CSP(A) is not constant-query testable (even with two-sided error) but is sublinear-query testable with one-sided error. (iii) Else, testing $\exists$CSP(A) with one-sided error requires a linear number of queries.

cs.DS↗

arXiv2016

Maximizing a Monotone Submodular Function with a Bounded Curvature under a Knapsack Constraint

We consider the problem of maximizing a monotone submodular function under a knapsack constraint. We show that, for any fixed $ε> 0$, there exists a polynomial-time algorithm with an approximation ratio $1-c/e-ε$, where $c \in [0,1]$ is the (total) curvature of the input function. This approximation ratio is tight up to $ε$ for any $c \in [0,1]$. To the best of our knowledge, this is the first result for a knapsack constraint that incorporates the curvature to obtain an approximation ratio better than $1-1/e$, which is tight for general submodular functions. As an application of our result, we present a polynomial-time algorithm for the budget allocation problem with an improved approximation ratio.

cs.DS↗

arXiv2016

Maximizing Monotone Submodular Functions over the Integer Lattice

The problem of maximizing non-negative monotone submodular functions under a certain constraint has been intensively studied in the last decade. In this paper, we address the problem for functions defined over the integer lattice. Suppose that a non-negative monotone submodular function $f:\mathbb{Z}_+^n \to \mathbb{R}_+$ is given via an evaluation oracle. Assume further that $f$ satisfies the diminishing return property, which is not an immediate consequence of submodularity when the domain is the integer lattice. Given this, we design polynomial-time $(1-1/e-ε)$-approximation algorithms for a cardinality constraint, a polymatroid constraint, and a knapsack constraint. For a cardinality constraint, we also provide a $(1-1/e-ε)$-approximation algorithm with slightly worse time complexity that does not rely on the diminishing return property.

cs.DS↗

arXiv2016

Coverage centralities for temporal networks

Structure of real networked systems, such as social relationship, can be modeled as temporal networks in which each edge appears only at the prescribed time. Understanding the structure of temporal networks requires quantifying the importance of a temporal vertex, which is a pair of vertex index and time. In this paper, we define two centrality measures of a temporal vertex based on the fastest temporal paths which use the temporal vertex. The definition is free from parameters and robust against the change in time scale on which we focus. In addition, we can efficiently compute these centrality values for all temporal vertices. Using the two centrality measures, we reveal that distributions of these centrality values of real-world temporal networks are heterogeneous. For various datasets, we also demonstrate that a majority of the highly central temporal vertices are located within a narrow time window around a particular time. In other words, there is a bottleneck time at which most information sent in the temporal network passes through a small number of temporal vertices, which suggests an important role of these temporal vertices in spreading phenomena.

physics.soc-ph↗

arXiv2015

Testing Properties of Functions on Finite Groups

We study testing properties of functions on finite groups. First we consider functions of the form $f:G \to \mathbb{C}$, where $G$ is a finite group. We show that conjugate invariance, homomorphism, and the property of being proportional to an irreducible character is testable with a constant number of queries to $f$, where a character is a crucial notion in representation theory. Our proof relies on representation theory and harmonic analysis on finite groups. Next we consider functions of the form $f: G \to M_d(\mathbb{C})$, where $d$ is a fixed constant and $M_d(\mathbb{C})$ is the family of $d$ by $d$ matrices with each element in $\mathbb{C}$. For a function $g:G \to M_d(\mathbb{C})$, we show that the unitary isomorphism to $g$ is testable with a constant number of queries to $f$, where we say that $f$ and $g$ are unitary isomorphic if there exists a unitary matrix $U$ such that $f(x) = Ug(x)U^{-1}$ for any $x \in G$.

cs.DS↗

arXiv2015

On the Equivalence among Problems of Bounded Width

In this paper, we introduce a methodology, called decomposition-based reductions, for showing the equivalence among various problems of bounded-width. First, we show that the following are equivalent for any $α> 0$: * SAT can be solved in $O^*(2^{α\mathrm{tw}})$ time, * 3-SAT can be solved in $O^*(2^{α\mathrm{tw}})$ time, * Max 2-SAT can be solved in $O^*(2^{α\mathrm{tw}})$ time, * Independent Set can be solved in $O^*(2^{α\mathrm{tw}})$ time, and * Independent Set can be solved in $O^*(2^{α\mathrm{cw}})$ time, where tw and cw are the tree-width and clique-width of the instance, respectively. Then, we introduce a new parameterized complexity class EPNL, which includes Set Cover and Directed Hamiltonicity, and show that SAT, 3-SAT, Max 2-SAT, and Independent Set parameterized by path-width are EPNL-complete. This implies that if one of these EPNL-complete problems can be solved in $O^*(c^k)$ time, then any problem in EPNL can be solved in $O^*(c^k)$ time.

cs.DS↗

arXiv2015

Gowers Norm, Function Limits, and Parameter Estimation

Let $\{f_i:\mathbb{F}_p^i \to \{0,1\}\}$ be a sequence of functions, where $p$ is a fixed prime and $\mathbb{F}_p$ is the finite field of order $p$. The limit of the sequence can be syntactically defined using the notion of ultralimit. Inspired by the Gowers norm, we introduce a metric over limits of function sequences, and study properties of it. One application of this metric is that it provides a characterization of affine-invariant parameters of functions that are constant-query estimable. Using this characterization, we show that the property of being a function of a constant number of low-degree polynomials and a constant number of factored polynomials (of arbitrary degrees) is constant-query testable if it is closed under blowing-up. Examples of this property include the property of having a constant spectral norm and degree-structural properties with rank conditions.

cs.CC↗

arXiv2015

Improved Approximation Algorithms for k-Submodular Function Maximization

This paper presents a polynomial-time $1/2$-approximation algorithm for maximizing nonnegative $k$-submodular functions. This improves upon the previous $\max\{1/3, 1/(1+a)\}$-approximation by Ward and Živný~(SODA'14), where $a=\max\{1, \sqrt{(k-1)/4}\}$. We also show that for monotone $k$-submodular functions there is a polynomial-time $k/(2k-1)$-approximation algorithm while for any $\varepsilon>0$ a $((k+1)/2k+\varepsilon)$-approximation algorithm for maximizing monotone $k$-submodular functions would require exponentially many queries. In particular, our hardness result implies that our algorithms are asymptotically tight. We also extend the approach to provide constant factor approximation algorithms for maximizing skew-bisubmodular functions, which were recently introduced as generalizations of bisubmodular functions.

cs.DS↗

arXiv2014

Learning Word Representations from Relational Graphs

Attributes of words and relations between two words are central to numerous tasks in Artificial Intelligence such as knowledge representation, similarity measurement, and analogy detection. Often when two words share one or more attributes in common, they are connected by some semantic relations. On the other hand, if there are numerous semantic relations between two words, we can expect some of the attributes of one of the words to be inherited by the other. Motivated by this close connection between attributes and relations, given a relational graph in which words are inter- connected via numerous semantic relations, we propose a method to learn a latent representation for the individual words. The proposed method considers not only the co-occurrences of words as done by existing approaches for word representation learning, but also the semantic relations in which two words co-occur. To evaluate the accuracy of the word representations learnt using the proposed method, we use the learnt word representations to solve semantic word analogy problems. Our experimental results show that it is possible to learn better word representations by using semantic semantics between words.

cs.CL↗

arXiv2014

Suppressing epidemics on networks by exploiting observer nodes

To control infection spreading on networks, we investigate the effect of observer nodes that recognize infection in a neighboring node and make the rest of the neighbor nodes immune. We numerically show that random placement of observer nodes works better on networks with clustering than on locally treelike networks, implying that our model is promising for realistic social networks. The efficiency of several heuristic schemes for observer placement is also examined for synthetic and empirical networks. In parallel with numerical simulations of epidemic dynamics, we also show that the effect of observer placement can be assessed by the size of the largest connected component of networks remaining after removing observer nodes and links between their neighboring nodes.

physics.soc-ph↗

arXiv2014

Half-integrality, LP-branching and FPT Algorithms

A recent trend in parameterized algorithms is the application of polytope tools (specifically, LP-branching) to FPT algorithms (e.g., Cygan et al., 2011; Narayanaswamy et al., 2012). However, although interesting results have been achieved, the methods require the underlying polytope to have very restrictive properties (half-integrality and persistence), which are known only for few problems (essentially Vertex Cover (Nemhauser and Trotter, 1975) and Node Multiway Cut (Garg et al., 1994)). Taking a slightly different approach, we view half-integrality as a \emph{discrete} relaxation of a problem, e.g., a relaxation of the search space from $\{0,1\}^V$ to $\{0,1/2,1\}^V$ such that the new problem admits a polynomial-time exact solution. Using tools from CSP (in particular Thapper and Živný, 2012) to study the existence of such relaxations, we provide a much broader class of half-integral polytopes with the required properties, unifying and extending previously known cases. In addition to the insight into problems with half-integral relaxations, our results yield a range of new and improved FPT algorithms, including an $O^*(|Σ|^{2k})$-time algorithm for node-deletion Unique Label Cover with label set $Σ$ and an $O^*(4^k)$-time algorithm for Group Feedback Vertex Set, including the setting where the group is only given by oracle access. All these significantly improve on previous results. The latter result also implies the first single-exponential time FPT algorithm for Subset Feedback Vertex Set, answering an open question of Cygan et al. (2012). Additionally, we propose a network flow-based approach to solve some cases of the relaxation problem. This gives the first linear-time FPT algorithm to edge-deletion Unique Label Cover.

cs.DS↗

arXiv2014

Testing Forest-Isomorphism in the Adjacency List Model

We consider the problem of testing if two input forests are isomorphic or are far from being so. An algorithm is called an $\varepsilon$-tester for forest-isomorphism if given an oracle access to two forests $G$ and $H$ in the adjacency list model, with high probability, accepts if $G$ and $H$ are isomorphic and rejects if we must modify at least $\varepsilon n$ edges to make $G$ isomorphic to $H$. We show an $\varepsilon$-tester for forest-isomorphism with a query complexity $\mathrm{polylog}(n)$ and a lower bound of $Ω(\sqrt{\log{n}})$. Further, with the aid of the tester, we show that every graph property is testable in the adjacency list model with $\mathrm{polylog}(n)$ queries if the input graph is a forest.

cs.DS↗

arXiv2014

A Characterization of Locally Testable Affine-Invariant Properties via Decomposition Theorems

Let $\mathcal{P}$ be a property of function $\mathbb{F}_p^n \to \{0,1\}$ for a fixed prime $p$. An algorithm is called a tester for $\mathcal{P}$ if, given a query access to the input function $f$, with high probability, it accepts when $f$ satisfies $\mathcal{P}$ and rejects when $f$ is "far" from satisfying $\mathcal{P}$. In this paper, we give a characterization of affine-invariant properties that are (two-sided error) testable with a constant number of queries. The characterization is stated in terms of decomposition theorems, which roughly claim that any function can be decomposed into a structured part that is a function of a constant number of polynomials, and a pseudo-random part whose Gowers norm is small. We first give an algorithm that tests whether the structured part of the input function has a specific form. Then we show that an affine-invariant property is testable with a constant number of queries if and only if it can be reduced to the problem of testing whether the structured part of the input function is close to one of a constant number of candidates.

cs.CC↗

arXiv2013

Linear-Time FPT Algorithms via Network Flow

In the area of parameterized complexity, to cope with NP-Hard problems, we introduce a parameter k besides the input size n, and we aim to design algorithms (called FPT algorithms) that run in O(f(k)n^d) time for some function f(k) and constant d. Though FPT algorithms have been successfully designed for many problems, typically they are not sufficiently fast because of huge f(k) and d. In this paper, we give FPT algorithms with small f(k) and d for many important problems including Odd Cycle Transversal and Almost 2-SAT. More specifically, we can choose f(k) as a single exponential (4^k) and d as one, that is, linear in the input size. To the best of our knowledge, our algorithms achieve linear time complexity for the first time for these problems. To obtain our algorithms for these problems, we consider a large class of integer programs, called BIP2. Then we show that, in linear time, we can reduce BIP2 to Vertex Cover Above LP preserving the parameter k, and we can compute an optimal LP solution for Vertex Cover Above LP using network flow. Then, we perform an exhaustive search by fixing half-integral values in the optimal LP solution for Vertex Cover Above LP. A bottleneck here is that we need to recompute an LP optimal solution after branching. To address this issue, we exploit network flow to update the optimal LP solution in linear time.

cs.DS↗

arXiv2013

Fast Exact Shortest-Path Distance Queries on Large Networks by Pruned Landmark Labeling

We propose a new exact method for shortest-path distance queries on large-scale networks. Our method precomputes distance labels for vertices by performing a breadth-first search from every vertex. Seemingly too obvious and too inefficient at first glance, the key ingredient introduced here is pruning during breadth-first searches. While we can still answer the correct distance for any pair of vertices from the labels, it surprisingly reduces the search space and sizes of labels. Moreover, we show that we can perform 32 or 64 breadth-first searches simultaneously exploiting bitwise operations. We experimentally demonstrate that the combination of these two techniques is efficient and robust on various kinds of large-scale real-world networks. In particular, our method can handle social networks and web graphs with hundreds of millions of edges, which are two orders of magnitude larger than the limits of previous exact methods, with comparable query time to those of previous methods.

cs.DS↗

arXiv2012

Semi-Strong Coloring of Intersecting Hypergraphs

For any c >= 2, a c-strong coloring of the hypergraph G is an assignment of colors to the vertices of G such that for every edge e of G, the vertices of e are colored by at least min{c,|e|} distinct colors. The hypergraph G is t-intersecting if every two edges of G have at least t vertices in common. We ask: for fixed c >= 2 and t >= 1, what is the minimum number of colors that is sufficient to c-strong color any t-intersecting hypergraphs? The purpose of this note is to answer the question for some values of t and c and, more importantly, to describe the settings for which the question is still open. We show that when t <= c-2, no finite number of colors is sufficient to c-strong color all t-intersecting hypergraphs. It is still unknown whether a finite number of colors suffices for the same task when t = c-1 and c > 2. In the last case, when t >= c, we show with a probabilistic argument that a finite number of colors is sufficient to c-strong color all t-intersecting hypergraphs, but a large gap still remains between the best upper and lower bounds on this number.

math.CO↗