SearcharxivSearch

arXiv subjects

Yuliang Shi

Publications and source records attributed to Yuliang Shi.

8 recordsLinked to original sources

The Heavy-tailed Frog Model

We study the frog model on $\mathbb Z^d$ and on the discrete tori $\mathbb T_L^d$, $d\ge 2$, with a symmetric, translation-invariant, and heavy-tailed transition kernel satisfying \[ Q(x,y)\asymp |x-y|^{-(d+\alpha)}, \qquad \alpha>0. \] Starting from an i.i.d. Poisson$(\lambda)$ number of sleeping particles per site and one active particle at the origin. Active particles perform independent $Q$-random walks and activate the particles they encounter. We first determine the timescale for activating distant vertices. When $\alpha\in(0,d)$, the time required to activate all vertices within distance $L$ of the origin is, with high probability, \[ (\log L)^{\Delta+o(1)}, \qquad \Delta^{-1}:=\log_2\left(\frac{2d}{d+\alpha}\right), \] as $L\to\infty$. This polylogarithmic spreading contrasts sharply with the linear spreading of the classical frog model driven by simple random walks; see Alves, Machado, and Popov (2002) and Ram\'irez and Sidoravicius (2004). When $\alpha>d$, we recover this classical linear behavior by proving matching linear upper and lower bounds; at $\alpha=d$, we prove a linear upper bound. Finally, we consider the finite-lifespan model on $\mathbb T_L^d$, in which each particle is removed after taking $\ell$ steps. We show that the cover lifespan, defined as the smallest $\ell$ for which the torus is entirely activated, is asymptotic to the cover time of a Poisson$(\lambda L^d)$ cloud of independent stationary random walkers.

math.PR

Existence and sharpness of the phase transition for the frog model on transitive graphs

We consider a slight modification of the frog model. For a given graph, each vertex has $\mathrm{Poisson}(\lambda)$ particles (or frogs). At time zero, only the particles at the origin are active, and all the other particles are sleeping. Each active particle performs an independent, continuous-time simple random walk, becoming inactive after time $t$. Once an active frog jumps to a vertex, it activates all of its particles. The survival of active particles can be studied as a dependent percolation model with two parameters $\lambda$ and $t$. In the present work, we establish the existence of a phase transition with respect to each parameter for non-amenable graphs of bounded degrees and quasi-transitive graphs of superlinear polynomial growth, as well as prove the sharpness of the phase transition for transitive graphs.

math.PR

Trajectory Inference with Smooth Schr\"odinger Bridges

Motivated by applications in trajectory inference and particle tracking, we introduce Smooth Schr\"odinger Bridges. Our proposal generalizes prior work by allowing the reference process in the Schr\"odinger Bridge problem to be a smooth Gaussian process, leading to more regular and interpretable trajectories in applications. Though na\"ively smoothing the reference process leads to a computationally intractable problem, we identify a class of processes (including the Mat\'ern processes) for which the resulting Smooth Schr\"odinger Bridge problem can be lifted to a simpler problem on phase space, which can be solved in polynomial time. We develop a practical approximation of this algorithm that outperforms existing methods on numerous simulated and real single-cell RNAseq datasets. The code can be found at https://github.com/WanliHongC/Smooth_SB

stat.ML

Model Selection for Causal Modeling in Missing Exposure Problems

In causal inference, properly selecting the propensity score (PS) model is an important topic and has been widely investigated in observational studies. There is also a large literature focusing on the missing data problem. However, there are very few studies investigating the model selection issue for causal inference when the exposure is missing at random (MAR). In this paper, we discuss how to select both imputation and PS models, which can result in the smallest root mean squared error (RMSE) of the estimated causal effect in our simulation study. Then, we propose a new criterion, called ``rank score'' for evaluating the overall performance of both models. The simulation studies show that the full imputation plus the outcome-related PS models lead to the smallest RMSE and the rank score can help select the best models. An application study is conducted to quantify the causal effect of cardiovascular disease (CVD) on the mortality of COVID-19 patients.

stat.ME

Causal Inference on Missing Exposure via Robust Estimation

How to deal with missing data in observational studies is a common concern for causal inference. When the covariates are missing at random (MAR), multiple approaches have been provided to help solve the issue. However, if the exposure is MAR, few approaches are available and careful adjustments on both missingness and confounding issues are required to ensure a consistent estimate of the true causal effect on the response. In this article, a new inverse probability weighting (IPW) estimator based on weighted estimating equations (WEE) is proposed to incorporate weights from both the missingness and propensity score (PS) models, which can reduce the joint effect of extreme weights in finite samples. Additionally, we develop a triple robust (TR) estimator via WEE to further protect against the misspecification of the missingness model. The asymptotic properties of WEE estimators are proved using properties of estimating equations. Based on the simulation studies, WEE methods outperform others including imputation-based approaches in terms of bias and variability. Finally, an application study is conducted to identify the causal effect of the presence of cardiovascular disease on mortality for COVID-19 patients.

stat.ME

EC-MOF/Phase-I: A computationally ready database of electrically conductive metal-organic frameworks with high-throughput structural and electronic properties

The advent of pi-stacked layered metal-organic frameworks (MOFs) opened up new horizons for designing compact MOF-based devices as they offer unique electrical conductivity on top of permanent porosity and exceptionally high surface area. By taking advantage of the modular nature of these electrically conductive (EC) MOFs, an unlimited number of materials can be created for applications in electronic devices such as battery electrodes, supercapacitors, and spintronics. Permutation of structural building blocks including different metal nodes and organic linkers results in new systems with unprecedented and unexplored physical and chemical properties. With the ultimate goal of providing a platform for accelerated materials design and discovery, here, we lay the foundations towards creation of the first comprehensive database of EC-MOFs with an experimentally guided approach. The first phase of this database, coined EC-MOF/Phase-I, is comprised of 1,061 bulk and mono-layer structures built by all possible combinations of experimentally reported organic linkers, functional groups and metal nodes. A high-throughput screening (HTS) work flow is constructed to implement density functional theory calculations with periodic boundary conditions to optimize the structures and calculate some of their most significantly relevant properties. Since research and development in the area of EC-MOFs has long been suffering from the lack of appropriate initial crystal structures, all the geometries and property data have been made available for the use of the community through the online platform that is developed in the course of this work. This database provides comprehensive physical and chemical data of EC-MOFs as well as convenience of selecting appropriate materials for specific applications, thus, accelerating design and discovery of EC-MOF-based compact devices.

cond-mat.mtrl-sci

Imbalanced Node Processing Method in Graph Neural Network Classification Task

In recent years, the node classification task in graph neural networks(GNNs) has developed rapidly, driving the development of research in various fields. However, there are a large number of class imbalances in the graph data, and there is a large gap between the number of different classes, resulting in suboptimal results in classification. Proposing a solution to the imbalance problem has become indispensable for the successful advancement of our downstream missions. Therefore, we start with the loss function and try to find a loss function that can effectively solve the imbalance of graph nodes to participate in the node classification task. thence, we introduce GHMC Loss into the graph neural networks to deal with difficult samples that are not marginal. Attenuate the loss contribution of marginal samples and simple samples. Experiments on multiple benchmarks show that our method can effectively deal with the class imbalance problem, and our method improves the accuracy by 3% compared to the traditional loss function.

cs.LG

FASS: A Fairness-Aware Approach for Concurrent Service Selection with Constraints

The increasing momentum of service-oriented architecture has led to the emergence of divergent delivered services, where service selection is meritedly required to obtain the target service fulfilling the requirements from both users and service providers. Despite many existing works have extensively handled the issue of service selection, it remains an open question in the case where requests from multiple users are performed simultaneously by a certain set of shared candidate services. Meanwhile, there exist some constraints enforced on the context of service selection, e.g. service placement location and contracts between users and service providers. In this paper, we focus on the QoS-aware service selection with constraints from a fairness aspect, with the objective of achieving max-min fairness across multiple service requests sharing candidate service sets. To be more specific, we study the problem of fairly selecting services from shared candidate sets while service providers are self-motivated to offer better services with higher QoS values. We formulate this problem as a lexicographical maximization problem, which is far from trivial to deal with practically due to its inherently multi-objective and discrete nature. A fairness-aware algorithm for concurrent service selection (FASS) is proposed, whose basic idea is to iteratively solve the single-objective subproblems by transforming them into linear programming problems. Experimental results based on real-world datasets also validate the effectiveness and practicality of our proposed approach.

cs.DC