arXiv subjects

Yuqi Wang

Publications and source records attributed to Yuqi Wang.

At least 91 records · Page 5Linked to original sources

arXiv2023

A personalized Uncertainty Quantification framework for patient survival models: estimating individual uncertainty of patients with metastatic brain tumors in the absence of ground truth

TodevelopanovelUncertaintyQuantification (UQ) framework to estimate the uncertainty of patient survival models in the absence of ground truth, we developed and evaluated our approach based on a dataset of 1383 patients treated with stereotactic radiosurgery (SRS) for brain metastases between January 2015 and December 2020. Our motivating hypothesis is that a time-to-event prediction of a test patient on inference is more certain given a higher feature-space-similarity to patients in the training set. Therefore, the uncertainty for a particular patient-of-interest is represented by the concordance index between a patient similarity rank and a prediction similarity rank. Model uncertainty was defined as the increased percentage of the max uncertainty-constrained-AUC compared to the model AUC. We evaluated our method on multiple clinically-relevant endpoints, including time to intracranial progression (ICP), progression-free survival (PFS) after SRS, overall survival (OS), and time to ICP and/or death (ICPD), on a variety of both statistical and non-statistical models, including CoxPH, conditional survival forest (CSF), and neural multi-task linear regression (NMTLR). Our results show that all models had the lowest uncertainty on ICP (2.21%) and the highest uncertainty (17.28%) on ICPD. OS models demonstrated high variation in uncertainty performance, where NMTLR had the lowest uncertainty(1.96%)and CSF had the highest uncertainty (14.29%). In conclusion, our method can estimate the uncertainty of individual patient survival modeling results. As expected, our data empirically demonstrate that as model uncertainty measured via our technique increases, the similarity between a feature-space and its predicted outcome decreases.

cs.LG↗

arXiv2023

Self-bound droplets in quasi-two-dimensional dipolar condensates

We study the ground-state properties of self-bound dipolar droplets in quasi-two-dimensional geometry by using the Gaussian state theory. We show that there exist two quantum phases corresponding to the macroscopic squeezed vacuum and squeezed coherent states. We further show that the radial size versus atom number curve exhibits a double-dip structure, as a result of the multiple quantum phases. In particular, we find that the critical atom number for the self-bound droplets is determined by the quantum phases, which allows us to distinguish the quantum state and validates the Gaussian state theory.

cond-mat.quant-gas↗

arXiv2023

Zero-Shot Medical Information Retrieval via Knowledge Graph Embedding

In the era of the Internet of Things (IoT), the retrieval of relevant medical information has become essential for efficient clinical decision-making. This paper introduces MedFusionRank, a novel approach to zero-shot medical information retrieval (MIR) that combines the strengths of pre-trained language models and statistical methods while addressing their limitations. The proposed approach leverages a pre-trained BERT-style model to extract compact yet informative keywords. These keywords are then enriched with domain knowledge by linking them to conceptual entities within a medical knowledge graph. Experimental evaluations on medical datasets demonstrate MedFusion Rank's superior performance over existing methods, with promising results with a variety of evaluation metrics. MedFusionRank demonstrates efficacy in retrieving relevant information, even from short or single-term queries.

cs.CL↗

arXiv2023

Ammonia-Net: A Multi-task Joint Learning Model for Multi-class Segmentation and Classification in Tooth-marked Tongue Diagnosis

In Traditional Chinese Medicine, the tooth marks on the tongue, stemming from prolonged dental pressure, serve as a crucial indicator for assessing qi (yang) deficiency, which is intrinsically linked to visceral health. Manual diagnosis of tooth-marked tongue solely relies on experience. Nonetheless, the diversity in shape, color, and type of tooth marks poses a challenge to diagnostic accuracy and consistency. To address these problems, herein we propose a multi-task joint learning model named Ammonia-Net. This model employs a convolutional neural network-based architecture, specifically designed for multi-class segmentation and classification of tongue images. Ammonia-Net performs semantic segmentation of tongue images to identify tongue and tooth marks. With the assistance of segmentation output, it classifies the images into the desired number of classes: healthy tongue, light tongue, moderate tongue, and severe tongue. As far as we know, this is the first attempt to apply the semantic segmentation results of tooth marks for tooth-marked tongue classification. To train Ammonia-Net, we collect 856 tongue images from 856 subjects. After a number of extensive experiments, the experimental results show that the proposed model achieves 99.06% accuracy in the two-class classification task of tooth-marked tongue identification and 80.02%. As for the segmentation task, mIoU for tongue and tooth marks amounts to 71.65%.

cs.CV↗

arXiv2023

Transferable Adversarial Attack on Image Tampering Localization

It is significant to evaluate the security of existing digital image tampering localization algorithms in real-world applications. In this paper, we propose an adversarial attack scheme to reveal the reliability of such tampering localizers, which would be fooled and fail to predict altered regions correctly. Specifically, the adversarial examples based on optimization and gradient are implemented for white/black-box attacks. Correspondingly, the adversarial example is optimized via reverse gradient propagation, and the perturbation is added adaptively in the direction of gradient rising. The black-box attack is achieved by relying on the transferability of such adversarial examples to different localizers. Extensive evaluations verify that the proposed attack sharply reduces the localization accuracy while preserving high visual quality of the attacked images.

cs.CV↗

arXiv2023

PanoOcc: Unified Occupancy Representation for Camera-based 3D Panoptic Segmentation

Comprehensive modeling of the surrounding 3D world is key to the success of autonomous driving. However, existing perception tasks like object detection, road structure segmentation, depth & elevation estimation, and open-set object localization each only focus on a small facet of the holistic 3D scene understanding task. This divide-and-conquer strategy simplifies the algorithm development procedure at the cost of losing an end-to-end unified solution to the problem. In this work, we address this limitation by studying camera-based 3D panoptic segmentation, aiming to achieve a unified occupancy representation for camera-only 3D scene understanding. To achieve this, we introduce a novel method called PanoOcc, which utilizes voxel queries to aggregate spatiotemporal information from multi-frame and multi-view images in a coarse-to-fine scheme, integrating feature learning and scene representation into a unified occupancy representation. We have conducted extensive ablation studies to verify the effectiveness and efficiency of the proposed method. Our approach achieves new state-of-the-art results for camera-based semantic segmentation and panoptic segmentation on the nuScenes dataset. Furthermore, our method can be easily extended to dense occupancy prediction and has shown promising performance on the Occ3D benchmark. The code will be released at https://github.com/Robertwyq/PanoOcc.

cs.CV↗

arXiv2023

Tracking Objects with 3D Representation from Videos

Data association is a knotty problem for 2D Multiple Object Tracking due to the object occlusion. However, in 3D space, data association is not so hard. Only with a 3D Kalman Filter, the online object tracker can associate the detections from LiDAR. In this paper, we rethink the data association in 2D MOT and utilize the 3D object representation to separate each object in the feature space. Unlike the existing depth-based MOT methods, the 3D object representation can be jointly learned with the object association module. Besides, the object's 3D representation is learned from the video and supervised by the 2D tracking labels without additional manual annotations from LiDAR or pretrained depth estimator. With 3D object representation learning from Pseudo 3D object labels in monocular videos, we propose a new 2D MOT paradigm, called P3DTrack. Extensive experiments show the effectiveness of our method. We achieve new state-of-the-art performance on the large-scale Waymo Open Dataset.

cs.CV↗

arXiv2023

Duke Spleen Data Set: A Publicly Available Spleen MRI and CT dataset for Training Segmentation

Spleen volumetry is primarily associated with patients suffering from chronic liver disease and portal hypertension, as they often have spleens with abnormal shapes and sizes. However, manually segmenting the spleen to obtain its volume is a time-consuming process. Deep learning algorithms have proven to be effective in automating spleen segmentation, but a suitable dataset is necessary for training such algorithms. To our knowledge, the few publicly available datasets for spleen segmentation lack confounding features such as ascites and abdominal varices. To address this issue, the Duke Spleen Data Set (DSDS) has been developed, which includes 109 CT and MRI volumes from patients with chronic liver disease and portal hypertension. The dataset includes a diverse range of image types, vendors, planes, and contrasts, as well as varying spleen shapes and sizes due to underlying disease states. The DSDS aims to facilitate the creation of robust spleen segmentation models that can take into account these variations and confounding factors.

eess.IV↗

arXiv2023

Hyperuniform disordered parametric loudspeaker array

A steerable parametric loudspeaker array is known for its directivity and narrow beam width. However, it often suffers from the grating lobes due to periodic array distributions. Here we propose the array configuration of hyperuniform disorder, which is short-range random while correlated at large scales, as a promising alternative distribution of acoustic antennas in phased arrays. Angle-resolved measurements reveal that the proposed array suppresses grating lobes and maintains a minimal radiation region in the vicinity of the main lobe for the primary frequency waves. These distinctive emission features benefit the secondary frequency wave in canceling the grating lobes regardless of the frequencies of the primary waves. Besides that, the hyperuniform disordered array is duplicatable, which facilitates extra-large array design without any additional computational efforts.

eess.AS↗

arXiv2023

FrustumFormer: Adaptive Instance-aware Resampling for Multi-view 3D Detection

The transformation of features from 2D perspective space to 3D space is essential to multi-view 3D object detection. Recent approaches mainly focus on the design of view transformation, either pixel-wisely lifting perspective view features into 3D space with estimated depth or grid-wisely constructing BEV features via 3D projection, treating all pixels or grids equally. However, choosing what to transform is also important but has rarely been discussed before. The pixels of a moving car are more informative than the pixels of the sky. To fully utilize the information contained in images, the view transformation should be able to adapt to different image regions according to their contents. In this paper, we propose a novel framework named FrustumFormer, which pays more attention to the features in instance regions via adaptive instance-aware resampling. Specifically, the model obtains instance frustums on the bird's eye view by leveraging image view object proposals. An adaptive occupancy mask within the instance frustum is learned to refine the instance location. Moreover, the temporal frustum intersection could further reduce the localization uncertainty of objects. Comprehensive experiments on the nuScenes dataset demonstrate the effectiveness of FrustumFormer, and we achieve a new state-of-the-art performance on the benchmark. Codes and models will be made available at https://github.com/Robertwyq/Frustum.

cs.CV↗

arXiv2022

4D Unsupervised Object Discovery

Object discovery is a core task in computer vision. While fast progresses have been made in supervised object detection, its unsupervised counterpart remains largely unexplored. With the growth of data volume, the expensive cost of annotations is the major limitation hindering further study. Therefore, discovering objects without annotations has great significance. However, this task seems impractical on still-image or point cloud alone due to the lack of discriminative information. Previous studies underlook the crucial temporal information and constraints naturally behind multi-modal inputs. In this paper, we propose 4D unsupervised object discovery, jointly discovering objects from 4D data -- 3D point clouds and 2D RGB images with temporal information. We present the first practical approach for this task by proposing a ClusterNet on 3D point clouds, which is jointly iteratively optimized with a 2D localization network. Extensive experiments on the large-scale Waymo Open Dataset suggest that the localization network and ClusterNet achieve competitive performance on both class-agnostic 2D object detection and 3D instance segmentation, bridging the gap between unsupervised methods and full supervised ones. Codes and models will be made available at https://github.com/Robertwyq/LSMOL.

cs.CV↗

arXiv2022

Portrait of locally driven quantum phase transition cascades in a molecular monolayer

Strongly interacting electrons in layered materials give rise to a plethora of emergent phenomena, such as unconventional superconductivity. heavy fermions, and spin textures with non-trivial topology. Similar effects can also be observed in bulk materials, but the advantage of two dimensional (2D) systems is the combination of local accessibility by microscopic techniques and tuneability. In stacks of 2D materials, for example, the twist angle can be employed to tune their properties. However, while material choice and twist angle are global parameters, the full complexity and potential of such correlated 2D electronic lattices will only reveal itself when tuning their parameters becomes possible on the level of individual lattice sites. Here, we discover a lattice of strongly correlated electrons in a perfectly ordered 2D supramolecular network by driving this system through a cascade of quantum phase transitions using a movable atomically sharp electrostatic gate. As the gate field is increased, the molecular building blocks change from a Kondo-screened to a paramagnetic phase one-by-one, enabling us to reconstruct their complex interactions in detail. We anticipate that the supramolecular nature of the system will in future allow to engineer quantum correlations in arbitrary patterned structures.

cond-mat.mes-hall↗

arXiv2022

Hermite-Gaussian-mode coherently composed states and deep learning based free-space optical communication link

In laser-based free-space optical communication, besides OAM beams, Hermite-Gaussian (HG) modes or HG-mode coherently composed states (HG-MCCS) can also be adopted as the information carrier to extend the channel capacity with the spatial pattern based encoding and decoding link. The light field of HG-MCCS is mainly determined by three independent parameters, including indexes of HG modes, relative initial phases between two eigenmodes, and scale coefficients of the eigenmodes, which can obtain a large number of effective coding modes at a low mode order. The beam intensity distributions of the HG-MCCSs have obvious distinguishable spatial characteristics and can keep propagation invariance, which are convenient to be decoded by the convolutional neural network (CNN) based image recognition method. We experimentally utilize HG-MCCS to realize a communication link including encoding, transmission under atmospheric turbulence (AT), and decoding based on CNN. With the index order of eigenmodes within six, 125 HG-MCCS are generated and used for information encoding, and the average recognition accuracy reached 99.5% for non-AT conditions. For the 125-level color images transmission, the error rate of the system is less than 1.8% even under the weak AT condition. Our work provides a useful basis for the future combination of dense data communication and artificial intelligence technology.

physics.optics↗

arXiv2022

Neuro-Symbolic Learning: Principles and Applications in Ophthalmology

Neural networks have been rapidly expanding in recent years, with novel strategies and applications. However, challenges such as interpretability, explainability, robustness, safety, trust, and sensibility remain unsolved in neural network technologies, despite the fact that they will unavoidably be addressed for critical applications. Attempts have been made to overcome the challenges in neural network computing by representing and embedding domain knowledge in terms of symbolic representations. Thus, the neuro-symbolic learning (NeSyL) notion emerged, which incorporates aspects of symbolic representation and bringing common sense into neural networks (NeSyL). In domains where interpretability, reasoning, and explainability are crucial, such as video and image captioning, question-answering and reasoning, health informatics, and genomics, NeSyL has shown promising outcomes. This review presents a comprehensive survey on the state-of-the-art NeSyL approaches, their principles, advances in machine and deep learning algorithms, applications such as opthalmology, and most importantly, future perspectives of this emerging field.

cs.CV↗

arXiv2022

Hessian-Free Second-Order Adversarial Examples for Adversarial Learning

Recent studies show deep neural networks (DNNs) are extremely vulnerable to the elaborately designed adversarial examples. Adversarial learning with those adversarial examples has been proved as one of the most effective methods to defend against such an attack. At present, most existing adversarial examples generation methods are based on first-order gradients, which can hardly further improve models' robustness, especially when facing second-order adversarial attacks. Compared with first-order gradients, second-order gradients provide a more accurate approximation of the loss landscape with respect to natural examples. Inspired by this, our work crafts second-order adversarial examples and uses them to train DNNs. Nevertheless, second-order optimization involves time-consuming calculation for Hessian-inverse. We propose an approximation method through transforming the problem into an optimization in the Krylov subspace, which remarkably reduce the computational complexity to speed up the training procedure. Extensive experiments conducted on the MINIST and CIFAR-10 datasets show that our adversarial learning with second-order adversarial examples outperforms other fisrt-order methods, which can improve the model robustness against a wide range of attacks.

cs.LG↗

arXiv2022

A Robust Ensemble Model for Patasitic Egg Detection and Classification

Intestinal parasitic infections, as a leading causes of morbidity worldwide, still lacks time-saving, high-sensitivity and user-friendly examination method. The development of deep learning technique reveals its broad application potential in biological image. In this paper, we apply several object detectors such as YOLOv5 and variant cascadeRCNNs to automatically discriminate parasitic eggs in microscope images. Through specially-designed optimization including raw data augmentation, model ensemble, transfer learning and test time augmentation, our model achieves excellent performance on challenge dataset. In addition, our model trained with added noise gains a high robustness against polluted input, which further broaden its applicability in practice.

cs.CV↗

arXiv2022

Fluctuation assisted collapses of Bose-Einstein condensates

We study the collapse dynamics of a Bose-Einstein condensate subjected to a sudden change of the scattering length to a negative value by adopting the self-consistent Gaussian state theory for mixed states. Compared to the Gross-Pitaevskii and the Hartree-Fock-Bogoliubov approaches, both fluctuations and three-body loss are properly treated in our theory. We find a new type of collapse assisted by fluctuations which amplify the attractive interaction between atoms. Moreover, the calculation of the fluctuated atoms, the entropy, and the second-order correlation function showed that the collapsed gas was significantly deviated from a pure state.

cond-mat.quant-gas↗

arXiv2022

Emergence of Machine Language: Towards Symbolic Intelligence with Neural Networks

Representation is a core issue in artificial intelligence. Humans use discrete language to communicate and learn from each other, while machines use continuous features (like vector, matrix, or tensor in deep neural networks) to represent cognitive patterns. Discrete symbols are low-dimensional, decoupled, and have strong reasoning ability, while continuous features are high-dimensional, coupled, and have incredible abstracting capabilities. In recent years, deep learning has developed the idea of continuous representation to the extreme, using millions of parameters to achieve high accuracies. Although this is reasonable from the statistical perspective, it has other major problems like lacking interpretability, poor generalization, and is easy to be attacked. Since both paradigms have strengths and weaknesses, a better choice is to seek reconciliation. In this paper, we make an initial attempt towards this direction. Specifically, we propose to combine symbolism and connectionism principles by using neural networks to derive a discrete representation. This process is highly similar to human language, which is a natural combination of discrete symbols and neural systems, where the brain processes continuous signals and represents intelligence via discrete language. To mimic this functionality, we denote our approach as machine language. By designing an interactive environment and task, we demonstrated that machines could generate a spontaneous, flexible, and semantic language through cooperation. Moreover, through experiments we show that discrete language representation has several advantages compared with continuous feature representation, from the aspects of interpretability, generalization, and robustness.

cs.CV↗