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Yuto Hosaka

Publications and source records attributed to Yuto Hosaka.

At least 19 recordsLinked to original sources

Mixing induced by microswimmers as probed by mutual information

We investigate fluid mixing induced by microswimmers using mutual information as a global, information-theoretic measure of mixing efficiency. For a two-dimensional squirmer model in a confined domain, we compute numerically the swimmer-generated flows and solve the advection-diffusion equation for the transport of tracer particles in the fluid. We show that the spatial distribution of swimmers strongly affects mixing, which is suppressed by swimmer aggregation and enhanced by positional and orientational disorder. At fixed energy dissipation, mixing efficiency depends non-monotonically on the squirmer parameter, with an optimal finite value arising from the balance between swimmer translation and dipolar flow generation. When hydrodynamic interactions are included, pushers outperform pullers. The mutual information as a function of time decays in three stages: an initial diffusion-dominated stage, an intermediate advection enhanced regime, and a final relaxation stage controlled by system size. Our results demonstrate that mutual information, previously validated as a measure of mixing efficiency only in simplified model systems, can equally be used in complex flows. Its application reveals that mixing by microswimmers is subject to a trade-off between the generation of strong shear flows and achieving optimal dispersion across the fluid domain.

cond-mat.soft

Lateral hydrodynamics in supported membranes: The Evans-Sackmann model and its extensions

We review the theoretical development and modern applications of the Evans-Sackmann hydrodynamic model for lateral transport in supported fluid membranes. We first cover the original formulation, emphasizing the linear momentum decay term that captures membrane-substrate coupling mediated by a thin lubricating fluid layer. This coupling term enables quantitative interpretation of tracer diffusion measurements in supported bilayers. Building on this foundation, we survey theoretical extensions that relax standard boundary conditions at the inclusion perimeter, where inclusions refer to embedded objects such as proteins, lipid domains, or tracer particles within the membrane. We discuss the drag of a disk and a liquid domain, as well as the dynamics of membrane phase separation. We further highlight how the supported-membrane mobility tensor serves as a unifying tool for systematic treatments of correlated diffusion, polymer dynamics, phase separation kinetics, and many-body interactions in quasi-two-dimensional environments. Finally, we discuss recent extensions to active and chiral membranes, where odd viscosity provides a transverse hydrodynamic response and offers a possible route for detecting chirality in two-dimensional fluids.

cond-mat.soft

Self-phoretic colloids in chiral active fluids

Autonomous and driven transport in chiral active fluids have been shown to exhibit features that cannot be accommodated within the classical formulation of fluid mechanics, due to the role of odd viscosity. We generalize the theory of phoretic active matter to fluid environments with odd viscosity and derive expressions for translational and rotational self-propulsion velocities in the case of a spherical swimmer with arbitrary activity and mobility surface profiles. We discuss specific examples of chemically active colloids with axisymmetric and non-axisymmetric coatings and the resulting interplay between symmetry and chirality. Our results can be applied to study the emergent collective dynamics of phoretic particles in fluid media with broken time-reversal and parity symmetries.

cond-mat.soft

Analytical response functions for a compressible thin fluid layer with odd viscosity

Fluids composed of chiral active components can exhibit odd viscosity, a property that breaks time-reversal and parity symmetries. We investigate the hydrodynamic response to monopole and dipole singularities in a compressible thin fluid layer with odd viscosity, supported by a conventional lubrication layer. Using the two-dimensional Green's function in Fourier space, we derive exact analytical solutions for the flow and pressure fields. These solutions provide a detailed description of the hydrodynamic interactions governing the motion of colloidal particles and microswimmers in confined chiral fluids, offering insight into the role of odd viscosity in modifying particle dynamics and collective behavior. The derived results are directly applicable to modeling transport, control, and self-organization phenomena in active and chiral microfluidic systems.

cond-mat.soft

Dumbbell dimer dynamics in three-dimensional chiral fluids

We study the emergent orientational dynamics of a dumbbell dimer -- two asymmetric monomers connected by a linking spring -- in a three-dimensional chiral environment with odd viscosity. In classical systems with conserved parity symmetry, reciprocal oscillations of a dimer does not lead to rotational motion. Here, through an analytical calculation, we find that the presence of chirality in the system induces rotational dynamics as function of the expansion/contraction of the dimer. By incorporating thermal fluctuations, we further find that the rotational diffusivity is affected by the coupling between conformational fluctuations and rotational motion. Our results provide insights into problems where the parity symmetry is broken and can be used as a building block to study similar models at the collective level. These problems include multi-component molecular machines in odd-viscous fluids and systems with charged polymers where oddity is present through external magnetic fields.

cond-mat.soft

Thermally driven two-sphere microswimmer with internal feedback control

We discuss the locomotion of a thermally driven elastic two-sphere microswimmer with internal feedback control that is realized by the position-dependent friction coefficients. In our model, the two spheres are in equilibrium with independent heat baths having different temperatures, causing a heat flow between the two spheres. We generally show that the average velocity of the microswimmer is nonzero when the friction coefficients are position-dependent. Using the method of stochastic thermodynamics, we obtain the entropy production rate and discuss the efficiency of the two-sphere microswimmer. The proposed self-propulsion mechanism highlights the importance of information in active matter and can be a fundamental process in various biological systems.

cond-mat.soft

Hydrodynamic flow field and frictional resistance coefficient of a disk rotating steadily in a compressible fluid layer with odd viscosity on a rigid substrate

We analyze the hydrodynamics of a rotating disk in a two-dimensional compressible fluid layer with odd viscosity. Unlike conventional fluids, odd viscosity introduces a radial flow component that can be directed either inward or outward, depending on its sign. This phenomenon is expected to significantly impact the hydrodynamic interactions between two rotating disks, potentially causing effective attraction or repulsion depending on the sign of the odd viscosity and the direction of rotation. Furthermore, we calculate the rotational resistance coefficient and find that odd viscosity increases this coefficient, regardless of its sign.

physics.flu-dyn

Analytical solution for the hydrodynamic resistance of a disk in a compressible fluid layer with odd viscosity on a rigid substrate

Chiral active fluids can exhibit odd viscosity, a property that breaks the time-reversal and parity symmetries. Here, we examine the hydrodynamic flows of a rigid disk moving in a compressible 2D fluid layer with odd viscosity, supported by a thin lubrication layer of a conventional fluid. Using the 2D Green's function in Fourier space, we derive an exact analytical solution for the flow around a disk of arbitrary size, as well as its resistance matrix. The resulting resistance coefficients break the Onsager reciprocity, but satisfy the Onsager-Casimir reciprocity to any order in odd viscosity.

physics.flu-dyn

Chirotactic response of microswimmers in fluids with odd viscosity

Odd viscosity is a property of chiral active fluids with broken time-reversal and parity symmetries. We show that the flow of such a fluid around a rotating axisymmetric body is exactly solvable and use this solution to determine the orientational dynamics of surface-driven microswimmers. Swimmers with a force-dipole moment exhibit precession around the axis of the odd viscosity. In addition, pushers show bimodal chirotaxis, i.e., alignment parallel or antiparallel to the axis, while pullers orbit in a plane perpendicular to it. A chiral swimmer that itself has a broken parity symmetry can exhibit unimodal chirotaxis and always align in the same direction.

cond-mat.soft

Lorentz Reciprocal Theorem in Fluids with Odd Viscosity

The Lorentz reciprocal theorem -- that is used to study various transport phenomena in hydrodynamics -- is violated in chiral active fluids that feature odd viscosity with broken time-reversal and parity symmetries. Here we show that the theorem can be generalized to fluids with odd viscosity by choosing an auxiliary problem with the opposite sign of the odd viscosity. We demonstrate the application of the theorem to two categories of microswimmers. Swimmers with prescribed surface velocity are not affected by odd viscosity, while those with prescribed active forces are. In particular, a torque-dipole can lead to directed motion.

cond-mat.soft

Hydrodynamics of an odd active surfer in a chiral fluid

We theoretically and computationally study the low-Reynolds-number hydrodynamics of a linear active microswimmer surfing on a compressible thin fluid layer characterized by an odd viscosity. Since the underlying three-dimensional fluid is assumed to be very thin compared to any lateral size of the fluid layer, the model is effectively two-dimensional. In the limit of small odd viscosity compared to the even viscosities of the fluid layer, we obtain analytical expressions for the self-induced flow field, which includes non-reciprocal components due to the odd viscosity. On this basis, we fully analyze the behavior of a single linear swimmer, finding that it follows a circular path, the radius of which is, to leading order, inversely proportional to the magnitude of the odd viscosity. In addition, we show that a pair of swimmers exhibits a wealth of two-body dynamics that depends on the initial relative orientation angles as well as on the propulsion mechanism adopted by each swimmer. In particular, the pusher-pusher and pusher-puller-type swimmer pairs exhibit a generic spiral motion, while the puller-puller pair is found to either co-rotate in the steady state along a circular trajectory or exhibit a more complex chaotic behavior resulting from the interplay between hydrodynamic and steric interactions. Our theoretical predictions may pave the way toward a better understanding of active transport in active chiral fluids with odd viscosity, and may find potential applications in the quantitative microrheological characterization of odd-viscous fluids.

cond-mat.soft

Generalized Three-Sphere Microswimmers

Among several models for microswimmers, the three-sphere microswimmer proposed by Najafi and Golestanian captures the essential mechanism for the locomotion of a microswimmer in a viscous fluid. Owing to its simplicity and flexibility, the original three-sphere model has been extended and generalized in various ways to discuss new swimming mechanisms of microswimmers. We shall provide a systematic and concise review of the various extensions of the three-sphere microswimmers that have been developed by the present authors. In particular, we shall discuss the following seven cases; elastic, thermal, odd, autonomous three-sphere microswimmers; two interacting ones; and those in viscoelastic and structured fluids. The well-known Purcell's scallop theorem can be generalized for stochastic three-sphere microswimmers and also for the locomotion in viscoelastic and structured fluids.

cond-mat.soft

Axisymmetric monopole and dipole flow singularities in proximity of a stationary no-slip plate immersed in a Brinkman fluid

Green's function plays an important role in many areas of physical sciences and is a prime tool for solving diverse hydrodynamic equations in the linear regime. In the present contribution, the axisymmetric low-Reynolds-number Brinkman flow induced by monopole and dipole singularities in proximity of a stationary plate of circular shape is theoretically investigated. The flow singularities are directed along the central axis of the plate. No-slip boundary conditions are assumed to hold at the surface of the plate. The Green's functions are determined to a large extent analytically, reducing the solution of the linear hydrodynamic equations to well-behaved one-dimensional integrals amenable to numerical computation. In our approach, the Brinkman flow problem is formulated as a mixed boundary value problem that is subsequently mapped in the form of dual integral equations on the domain boundaries. Thereupon, the solution of the equations of fluid motion is eventually reduced to the solution of two independent Fredholm integral equations of the first kind. The overall flow structure and emerging eddy patterns are found to strongly depend on the magnitude of the relevant geometrical and physical parameters of the system. Moreover, the effect of the confining plate on the dynamics of externally driven or force-free particles is assessed through the calculation of the relevant hydrodynamic reaction functions. The effect of the plate on the locomotory behavior of a self-propelling active dipole swimmer is shown to be maximum when the radius of the plate is comparable to the distance separating the swimmer from the plate. Our results may prove useful for characterizing transport processes in microfluidic devices and may pave the way toward understanding and controlling of small-scale flows in porous media.

cond-mat.soft

Odd elasticity of a catalytic micromachine

We perform numerical simulations of a model micromachine driven by catalytic chemical reactions. Our model includes a mechano-chemical coupling between the structural variables and the nonequilibrium variable describing the catalytic reactions. The time-correlation functions of the structural variables are calculated and further analyzed in terms of odd Langevin dynamics. We obtain the effective odd elastic constant that manifests the broken time-reversal symmetry of a catalytic micromachine. Within the simulation, we separately estimate the quantity called nonreciprocality and show that its behavior is similar to that of the odd elasticity.Our approach suggests a new method to extract the nonequilibrium properties of a micromachine only by measuring its structural dynamics.

cond-mat.soft

Pair dynamics of active force dipoles in an odd-viscous fluid

We discuss the lateral dynamics of two active force dipoles, which interact with each other via hydrodynamic interactions in a thin fluid layer that is active and chiral. The fluid layer is modeled as a two-dimensional (2D) compressible fluid with an odd viscosity, while the force dipole (representing an active protein or enzyme) induces a dipolar flow. Taking into account the momentum decay in the 2D fluid, we obtain analytically the mobility tensor that depends on the odd viscosity and includes nonreciprocal hydrodynamic interactions. We find that the particle pair shows spiral behavior due to the transverse flow induced by the odd viscosity. When the magnitude of the odd viscosity is large as compared with the shear viscosity, two types of oscillatory behaviors are seen. One of them can be understood as arising from closed orbits in dynamical systems, and its circular trajectories are determined by the ratio between the magnitude of the odd viscosity and the force dipole. In addition, the phase diagrams of the particle dipolar angles are obtained numerically. Our findings reveal that the nonreciprocal response leads to complex dynamics of active particles embedded in an active fluid with odd viscosity.

cond-mat.soft

Simulations of Odd Microswimmers

We perform numerical simulations of odd microswimmers consisting of three spheres and two odd springs. To describe the hydrodynamic interaction, both the Oseen-type and the Rotne-Prager-Yamakawa (RPY)-type mobilities are used. For the Oseen-type mobility, the simulation results quantitatively reproduce the asymptotic expression of the average velocity. For the RPY-type mobility, on the other hand, the average velocity is smaller than that of the Oseen-type mobility and the deviation is more pronounced for larger spheres. We also perform simulations of microswimmers having different sphere sizes and show that the average velocity becomes smaller than that of the equal size case. The size of the middle sphere plays an important role in determining the average velocity.

cond-mat.soft

Onsager's variational principle for nonreciprocal systems with odd elasticity

Using Onsager's variational principle, we derive dynamical equations for a nonequilibrium active system with odd elasticity. The elimination of the extra variable that is coupled to the nonequilibrium driving force leads to the nonreciprocal set of equations for the material coordinates. The obtained nonreciprocal equations manifest the physical origin of the odd elastic constants that are proportional to the nonequilibrium force and the friction coefficients. Our approach offers a systematic and consistent way to derive nonreciprocal equations for active matter in which the time-reversal symmetry is broken.

cond-mat.soft

Lateral response of a layered material with interlayer friction

We investigate the mechanical properties of a layered material with interlayer friction. We propose a model that contains lateral elasticity and interlayer friction to obtain the response function both in the Fourier and real spaces. By investigating how the internal deformation is laterally induced due to the applied surface displacement, we find that it is transmitted into the material with an apparent phase difference. We also obtain the effective complex modulus of the layered material and show that it exhibits an intermediate power-law behavior in the low-frequency regime. Our result can be used to estimate the internal deformation of layered materials that exist on various different scales.

cond-mat.soft